Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.H00968 Eucalyptus grandis HOM05D006932 ORTHO05D014708 7.6e-168 594.0 345 100.0
TAR628G0089 Trochodendron aralioides HOM05D006932 ORTHO05D009616 3.4e-35 153.3 382 34.0
QL02p012013 Quercus lobata HOM05D006932 ORTHO05D009616 8.7e-31 138.7 422 32.5
CiPaw.07G147900 Carya illinoinensis HOM05D006932 ORTHO05D009616 2.8e-29 133.7 421 31.6
RcHm_v2.0_Chr6g0303131 Rosa chinensis HOM05D006932 ORTHO05D009616 5.3e-28 129.4 409 32.0
FvH4_2g38240 Fragaria vesca HOM05D006932 ORTHO05D009616 9.0e-28 128.6 410 32.0
Thecc.08G046600 Theobroma cacao HOM05D006932 ORTHO05D009616 1.5e-27 127.9 357 35.0
FAN27G2636 Fragaria x ananassa HOM05D006932 ORTHO05D009616 3.4e-27 126.7 409 31.3
PGR031G2736 Punica granatum HOM05D006932 ORTHO05D009616 9.9e-27 125.2 450 32.2
Duzib093G0008 Durio zibethinus HOM05D006932 ORTHO05D009616 1.3e-26 124.8 371 33.7
Gorai.009G193700 Gossypium raimondii HOM05D006932 ORTHO05D009616 1.3e-26 124.8 359 34.8
Gohir.D05G188400 Gossypium hirsutum HOM05D006932 ORTHO05D009616 3.8e-26 123.2 359 34.3
FAN20G1755 Fragaria x ananassa HOM05D006932 ORTHO05D009616 4.6e-24 116.3 390 30.8
Gohir.A05G185600 Gossypium hirsutum HOM05D006932 ORTHO05D009616 1.0e-23 115.2 368 33.2
FAN15G2452 Fragaria x ananassa HOM05D006932 ORTHO05D009616 3.9e-23 113.2 410 30.2
TWI56G1403 Tripterygium wilfordii HOM05D006932 ORTHO05D009616 8.7e-23 112.1 347 31.1
Actinidia37937 Actinidia chinensis HOM05D006932 ORTHO05D009616 4.3e-22 109.8 354 31.4
Prupe.1G363400 Prunus persica HOM05D006932 ORTHO05D009616 2.4e-20 104.0 413 28.6
VMungo1309G1702 Vigna mungo HOM05D006932 ORTHO05D009616 1.4e-17 94.7 397 29.7
CsaV3_2G029620 Cucumis sativus L. HOM05D006932 ORTHO05D009616 2.5e-17 94.0 396 28.0
Thhalv10006798m.g Eutrema salsugineum HOM05D006932 ORTHO05D009616 5.5e-17 92.8 349 28.1
RhsimUnG0065200 Rhododendron simsii HOM05D006932 ORTHO05D009616 7.1e-17 92.4 317 30.6
Lj4C22G4 Lonicera japonica HOM05D006932 ORTHO05D009616 1.2e-16 91.7 354 29.7
Dinv31864 Davidia involucrata HOM05D006932 ORTHO05D009616 1.6e-16 91.3 346 28.0
ClCG08G014220 Citrullus lanatus HOM05D006932 ORTHO05D009616 2.1e-16 90.9 396 28.8
Nn5g30750 Nelumbo nucifera HOM05D006932 ORTHO05D009616 2.7e-16 90.5 416 24.5
CARHR020530 Cardamine hirsuta HOM05D006932 ORTHO05D009616 6.0e-16 89.4 375 25.3
vmacro04363 Vaccinium macrocarpon HOM05D006932 ORTHO05D014708 7.9e-16 89.0 98 51.0
Sp1g17820 Schrenkiella parvula HOM05D006932 ORTHO05D009616 1.3e-15 88.2 348 28.7
CAN.G6.34 Capsicum annuum HOM05D006932 ORTHO05D009616 8.7e-15 85.5 392 25.3
Aa31LG7G4500 Aethionema arabicum HOM05D006932 ORTHO05D009616 1.5e-14 84.7 360 28.9
Sed0011683 Sechium edule HOM05D006932 ORTHO05D009616 1.5e-14 84.7 365 28.5
EL10Ac1g02169 Beta vulgaris HOM05D006932 ORTHO05D009616 2.5e-14 84.0 350 25.1
MELO3C011020.2 Cucumis melo HOM05D006932 ORTHO05D009616 4.3e-14 83.2 372 28.0
GSVIVG01009937001 Vitis vinifera HOM05D006932 ORTHO05D014708 3.7e-13 80.1 104 46.2
Phvul.009G009500 Phaseolus vulgaris HOM05D006932 ORTHO05D009616 4.8e-13 79.7 437 26.1
A07p16040 Brassica napus HOM05D006932 ORTHO05D009616 1.4e-12 78.2 365 27.7
BraA07t29332Z Brassica rapa HOM05D006932 ORTHO05D009616 1.4e-12 78.2 365 27.7
BcaB03g14335 Brassica carinata HOM05D006932 ORTHO05D009616 2.4e-12 77.4 379 31.1
CANSAT25G0116 Cannabis sativa HOM05D006932 ORTHO05D009616 2.4e-12 77.4 344 27.6
BolC7t42874H Brassica oleracea HOM05D006932 ORTHO05D009616 3.1e-12 77.0 353 26.1
MD08G1010800 Malus domestica HOM05D006932 ORTHO05D009616 4.1e-12 76.6 65 53.8
COL.COLO4_26127 Corchorus olitorius HOM05D006932 ORTHO05D009616 5.3e-12 76.3 60 61.7
BcaB03g14345 Brassica carinata HOM05D006932 ORTHO05D009616 6.9e-12 75.9 375 26.9
AUR62040551 Chenopodium quinoa HOM05D006932 ORTHO05D009616 6.9e-12 75.9 104 45.2
C07p23410 Brassica napus HOM05D006932 ORTHO05D009616 1.5e-11 74.7 362 27.3
THA.LOC104811418 Tarenaya hassleriana HOM05D006932 ORTHO05D009616 4.5e-11 73.2 63 54.0
Aqoxy5G01813 Aquilegia oxysepala HOM05D006932 ORTHO05D009616 5.9e-11 72.8 343 28.0
Cpa.g.sc26.310 Carica papaya HOM05D006932 ORTHO05D009616 5.9e-11 72.8 64 51.6
Peaxi162Scf00553g00220 Petunia axillaris HOM05D006932 ORTHO05D009616 7.6e-11 72.4 101 39.6
Manes.18G012000 Manihot esculenta HOM05D006932 ORTHO05D009616 1.0e-10 72.0 67 53.7
Lalb_Chr23g0266091 Lupinus albus HOM05D006932 ORTHO05D009616 1.3e-10 71.6 384 27.3
AUR62041481 Chenopodium quinoa HOM05D006932 ORTHO05D009616 2.9e-10 70.5 105 42.9
Nitab4.5_0003251g0090 Nicotiana tabacum HOM05D006932 ORTHO05D009616 5.0e-10 69.7 125 38.4
Sc15g0004860 Simmondsia chinensis HOM05D006932 ORTHO05D009616 5.0e-10 69.7 300 28.3
Potri.013G068501 Populus trichocarpa HOM05D006932 ORTHO05D009616 6.5e-10 69.3 107 48.6
Nitab4.5_0000337g0050 Nicotiana tabacum HOM05D006932 ORTHO05D009616 5.5e-09 66.2 66 50.0
PSO700G0201 Papaver somniferum HOM05D006932 ORTHO05D009616 9.3e-09 65.5 73 49.3
Sopen08g012470 Solanum pennellii HOM05D006932 ORTHO05D009616 1.2e-08 65.1 56 51.8
Hund05180 Selenicereus undatus HOM05D006932 ORTHO05D009616 3.6e-08 63.5 96 41.7
AL1G32860 Arabidopsis lyrata HOM05D006932 ORTHO05D009616 4.6e-08 63.2 86 41.9
PSO170G2579 Papaver somniferum HOM05D006932 ORTHO05D009616 4.6e-08 63.2 433 23.8
Glyma.06G023500 Glycine max HOM05D006932 ORTHO05D009616 7.9e-08 62.4 58 55.2
ATR0090G024 Amborella trichopoda HOM05D006932 ORTHO05D009616 1.0e-07 62.0 64 46.9
Lj1g0021590 Lotus japonicus HOM05D006932 ORTHO05D009616 1.0e-07 62.0 61 49.2
Ca_00838_v3 Cicer arietinum L. HOM05D006932 ORTHO05D009616 1.4e-07 61.6 105 41.0
arahy.Tifrunner.gnm1.ann1.XXR9N9 Arachis hypogaea HOM05D006932 ORTHO05D009616 2.3e-07 60.8 102 38.2
Ciclev10003784m.g Citrus clementina HOM05D006932 ORTHO05D009616 2.3e-07 60.8 60 53.3
Medtr3g113630 Medicago truncatula HOM05D006932 ORTHO05D009616 2.3e-07 60.8 58 50.0
TPR.G34552 Trifolium pratense HOM05D006932 ORTHO05D009616 2.3e-07 60.8 93 43.0
DCAR_019767 Daucus carota HOM05D002235 ORTHO05D006252 3.0e-07 60.5 58 51.7
SalBow7G2156 Salvia bowleyana HOM05D006932 ORTHO05D009616 3.0e-07 60.5 449 21.8
MBI09_g14155_MAGBIO Magnolia biondii HOM05D025692 ORTHO05D014708 6.7e-07 59.3 149 34.2
CSS0046587 Camellia sinensis var. sinensis HOM05D006932 ORTHO05D014708 8.8e-07 58.9 62 51.6
arahy.Tifrunner.gnm1.ann1.Z8J4EM Arachis hypogaea HOM05D006932 ORTHO05D009616 1.1e-06 58.5 59 47.5
PGSC0003DMG400000962 Solanum tuberosum HOM05D006932 ORTHO05D014708 1.9e-06 57.8 76 47.4
Carub.0001s1959 Capsella rubella HOM05D006932 ORTHO05D009616 2.5e-06 57.4 407 25.6
Cc10_g01490 Coffea canephora HOM05D006932 ORTHO05D009616 2.5e-06 57.4 80 42.5
Atru.chr13.264 Acer truncatum HOM05D006932 ORTHO05D014708 5.7e-06 56.2 45 60.0


User provided reference genes

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