Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.H00961 Eucalyptus grandis HOM05D007731 ORTHO05D008483 3.3e-134 481.9 270 100.0
Potri.005G241800 Populus trichocarpa HOM05D007731 ORTHO05D008483 3.7e-29 132.9 282 40.4
QL02p012129 Quercus lobata HOM05D007731 ORTHO05D008483 3.7e-29 132.9 283 43.1
Sabra05G0187200 Salix brachista HOM05D007731 ORTHO05D008483 1.0e-26 124.8 294 39.5
Thecc.08G047100 Theobroma cacao HOM05D007731 ORTHO05D008483 5.0e-26 122.5 282 41.5
Manes.05G145300 Manihot esculenta HOM05D007731 ORTHO05D008483 1.9e-25 120.6 278 40.6
Duzib093G0569 Durio zibethinus HOM05D007731 ORTHO05D008483 4.3e-25 119.4 287 38.7
Gohir.A05G185300 Gossypium hirsutum HOM05D007731 ORTHO05D008483 4.7e-24 115.9 282 41.8
Manes.18G011966 Manihot esculenta HOM05D007731 ORTHO05D008483 5.2e-23 112.5 286 38.1
Gorai.009G193400 Gossypium raimondii HOM05D007731 ORTHO05D008483 4.4e-22 109.4 282 41.8
Cfa013976 Carpinus fangiana HOM05D007731 ORTHO05D008483 5.8e-22 109.0 170 47.6
Cc00_g29330 Coffea canephora HOM05D007731 ORTHO05D008483 9.8e-22 108.2 288 37.8
Haze_22661 Corylus avellana HOM05D007731 ORTHO05D008483 9.8e-22 108.2 170 47.1
Ciclev10002425m.g Citrus clementina HOM05D007731 ORTHO05D008483 1.3e-21 107.8 197 45.2
CiPaw.07G147300 Carya illinoinensis HOM05D007731 ORTHO05D008483 3.7e-21 106.3 200 42.0
CANSAT25G3722 Cannabis sativa HOM05D007731 ORTHO05D008483 6.4e-21 105.5 184 44.6
Prupe.1G363100 Prunus persica HOM05D007731 ORTHO05D008483 1.4e-20 104.4 237 38.4
TAR376G0482 Trochodendron aralioides HOM05D007731 ORTHO05D008483 1.4e-20 104.4 278 36.7
CiPaw.08G067400 Carya illinoinensis HOM05D007731 ORTHO05D008483 3.2e-20 103.2 177 45.8
TAR628G0423 Trochodendron aralioides HOM05D007731 ORTHO05D008483 9.2e-20 101.7 277 37.9
Potri.002G019700 Populus trichocarpa HOM05D007731 ORTHO05D008483 1.2e-19 101.3 286 38.5
Hma1.2p1_0733F.1_g210180 Hydrangea macrophylla HOM05D007731 ORTHO05D008483 1.6e-19 100.9 216 40.7
ClCG08G014190 Citrullus lanatus HOM05D007731 ORTHO05D008483 2.1e-19 100.5 219 40.2
Gohir.D05G188100 Gossypium hirsutum HOM05D007731 ORTHO05D008483 2.1e-19 100.5 282 40.8
Cpa.g.sc26.305 Carica papaya HOM05D007731 ORTHO05D008483 2.7e-19 100.1 272 34.6
RcHm_v2.0_Chr6g0303181 Rosa chinensis HOM05D007731 ORTHO05D008483 2.7e-19 100.1 209 40.2
Dinv39536 Davidia involucrata HOM05D007731 ORTHO05D008483 3.5e-19 99.8 178 45.5
MSTRG.25262 Avicennia marina HOM05D007731 ORTHO05D008483 6.0e-19 99.0 229 41.0
Gohir.A01G110400 Gossypium hirsutum HOM05D007731 ORTHO05D008483 1.0e-18 98.2 272 36.8
COL.COLO4_26124 Corchorus olitorius HOM05D007731 ORTHO05D008483 1.3e-18 97.8 276 40.6
Gorai.002G122700 Gossypium raimondii HOM05D007731 ORTHO05D008483 1.7e-18 97.4 215 40.5
Sabra02G0016000 Salix brachista HOM05D007731 ORTHO05D008483 3.0e-18 96.7 288 35.8
TWI12G0892 Tripterygium wilfordii HOM05D007731 ORTHO05D008483 5.1e-18 95.9 205 41.0
Gohir.D01G097000 Gossypium hirsutum HOM05D007731 ORTHO05D008483 6.6e-18 95.5 215 40.0
FvH4_2g38210 Fragaria vesca HOM05D007731 ORTHO05D008483 1.1e-17 94.7 191 41.4
Nn6g32002 Nelumbo nucifera HOM05D007731 ORTHO05D008483 1.1e-17 94.7 212 42.0
CSS0046256 Camellia sinensis var. sinensis HOM05D007731 ORTHO05D008483 1.5e-17 94.4 278 39.2
CSS0037397 Camellia sinensis var. sinensis HOM05D007731 ORTHO05D008483 1.9e-17 94.0 220 38.6
FAN20G0947 Fragaria x ananassa HOM05D007731 ORTHO05D008483 3.3e-17 93.2 184 42.4
FAN15G0282 Fragaria x ananassa HOM05D007731 ORTHO05D008483 4.3e-17 92.8 191 40.3
FAN27G0472 Fragaria x ananassa HOM05D007731 ORTHO05D008483 7.3e-17 92.0 193 39.4
Lj4P799T27 Lonicera japonica HOM05D007731 ORTHO05D008483 1.2e-16 91.3 237 38.0
CSS0005102 Camellia sinensis var. sinensis HOM05D007731 ORTHO05D008483 2.8e-16 90.1 278 38.5
Nn5g30769 Nelumbo nucifera HOM05D007731 ORTHO05D008483 8.1e-16 88.6 161 42.9
TWI56G0526 Tripterygium wilfordii HOM05D007731 ORTHO05D008483 1.1e-15 88.2 207 38.2
CsaV3_2G024250 Cucumis sativus L. HOM05D007731 ORTHO05D008483 2.3e-15 87.0 222 38.3
Lsat_1_v5_gn_8_30081 Lactuca sativa HOM05D007731 ORTHO05D008483 3.1e-15 86.7 222 39.2
Sed0013309 Sechium edule HOM05D007731 ORTHO05D008483 6.8e-15 85.5 223 37.7
ECA233G0921 Erigeron canadensis HOM05D007731 ORTHO05D008483 1.2e-14 84.7 200 38.5
Aqoxy6G02285 Aquilegia oxysepala HOM05D007731 ORTHO05D008483 1.5e-14 84.3 192 41.1
CSS0031900 Camellia sinensis var. sinensis HOM05D007731 ORTHO05D008483 4.4e-14 82.8 220 36.4
Sopen04g035340 Solanum pennellii HOM05D007731 ORTHO05D008483 2.2e-13 80.5 120 45.8
arahy.Tifrunner.gnm1.ann1.3IU0NQ Arachis hypogaea HOM05D007731 ORTHO05D008483 3.7e-13 79.7 176 37.5
arahy.Tifrunner.gnm1.ann1.WY2XWP Arachis hypogaea HOM05D007731 ORTHO05D008483 4.9e-13 79.3 177 38.4
Phvul.009G009600 Phaseolus vulgaris HOM05D007731 ORTHO05D008483 6.4e-13 79.0 215 35.8
PSO541G3821 Papaver somniferum HOM05D007731 ORTHO05D008483 1.4e-12 77.8 210 41.0
PGSC0003DMG400009876 Solanum tuberosum HOM05D007731 ORTHO05D008483 2.4e-12 77.0 236 33.9
VMungo1309G0548 Vigna mungo HOM05D007731 ORTHO05D008483 2.4e-12 77.0 209 34.0
ClCG05G015580 Citrullus lanatus HOM05D007731 ORTHO05D008483 3.2e-12 76.6 76 55.3
Psat0s2878g0040 Pisum sativum HOM05D007731 ORTHO05D008483 4.1e-12 76.3 192 38.0
PGR031G1853 Punica granatum HOM05D007731 ORTHO05D008483 4.1e-12 76.3 200 40.5
CsaV3_3G045970 Cucumis sativus L. HOM05D007731 ORTHO05D008483 7.1e-12 75.5 72 56.9
MELO3C003742.2 Cucumis melo HOM05D007731 ORTHO05D008483 1.2e-11 74.7 82 50.0
SGA_v2.0_scaffold92G28205 Striga asiatica HOM05D007731 ORTHO05D008483 1.2e-11 74.7 209 38.8
Actinidia16998 Actinidia chinensis HOM05D007731 ORTHO05D008483 1.6e-11 74.3 212 37.3
Ca_15482_v3 Cicer arietinum L. HOM05D007731 ORTHO05D008483 1.3e-10 71.2 88 52.3
Glyma.04G023500 Glycine max HOM05D007731 ORTHO05D008483 1.7e-10 70.9 211 36.0
Lalb_Chr23g0266081 Lupinus albus HOM05D007731 ORTHO05D008483 3.9e-10 69.7 256 31.2
TPR.G34549 Trifolium pratense HOM05D007731 ORTHO05D008483 5.1e-10 69.3 197 38.1
Gohir.A02G083100 Gossypium hirsutum HOM05D007731 ORTHO05D008483 8.6e-10 68.6 183 37.7
Gohir.D02G098500 Gossypium hirsutum HOM05D007731 ORTHO05D008483 1.1e-09 68.2 201 37.8
Gorai.005G112400 Gossypium raimondii HOM05D007731 ORTHO05D008483 2.5e-09 67.0 257 33.1
BcaC05g25901 Brassica carinata HOM05D009961 ORTHO05D008483 4.3e-09 66.2 62 54.8
C05p18560 Brassica napus HOM05D009961 ORTHO05D008483 4.3e-09 66.2 62 54.8
BolC5t30567H Brassica oleracea HOM05D009961 ORTHO05D008483 4.3e-09 66.2 62 54.8
Lj1g0026139 Lotus japonicus HOM05D007731 ORTHO05D008483 4.3e-09 66.2 227 35.2
Medtr3g113660 Medicago truncatula HOM05D007731 ORTHO05D008483 5.6e-09 65.9 199 36.7
Aa31LG7G4510 Aethionema arabicum HOM05D009961 ORTHO05D008483 1.6e-08 64.3 61 52.5
Carub.0001s1960 Capsella rubella HOM05D009961 ORTHO05D008483 1.6e-08 64.3 74 50.0
BraA06t24726Z Brassica rapa HOM05D009961 ORTHO05D008483 2.1e-08 63.9 52 61.5
Glyma.06G023400 Glycine max HOM05D007731 ORTHO05D008483 1.8e-07 60.8 86 44.2
Rhsim06G0016400 Rhododendron simsii HOM05D007731 ORTHO05D008483 1.8e-07 60.8 210 33.8
Lalb_Chr19g0131461 Lupinus albus HOM05D007731 ORTHO05D008483 2.4e-07 60.5 56 53.6
Actinidia15437 Actinidia chinensis HOM05D007731 ORTHO05D008483 4.0e-07 59.7 186 37.6
Potri.008G198000 Populus trichocarpa HOM05D001921 ORTHO05D001784 4.0e-07 59.7 105 37.1
Rhsim06G0019700 Rhododendron simsii HOM05D007731 ORTHO05D008483 6.8e-07 58.9 210 33.8
CARHR020550 Cardamine hirsuta HOM05D009961 ORTHO05D008483 1.5e-06 57.8 52 55.8
Sc15g0004830 Simmondsia chinensis HOM05D007731 ORTHO05D008483 1.5e-06 57.8 190 32.1
Manes.15G019800 Manihot esculenta HOM05D001921 ORTHO05D001784 2.0e-06 57.4 97 38.1
Potri.010G027500 Populus trichocarpa HOM05D001921 ORTHO05D001784 2.0e-06 57.4 118 35.6
ATR0712G013 Amborella trichopoda HOM05D007731 ORTHO05D008483 2.6e-06 57.0 248 29.4
Sabra08G0162400 Salix brachista HOM05D001921 ORTHO05D001784 2.6e-06 57.0 149 35.6
Duzib151G0850 Durio zibethinus HOM05D001921 ORTHO05D001784 4.4e-06 56.2 106 34.9


User provided reference genes

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