Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.H00930 Eucalyptus grandis HOM05D001663 ORTHO05D005717 5.1e-271 937.2 479 100.0
Dinv44724 Davidia involucrata HOM05D001663 ORTHO05D005717 1.7e-218 762.7 479 80.0
Ciclev10001001m.g Citrus clementina HOM05D001663 ORTHO05D005717 1.8e-215 752.7 479 79.3
FvH4_5g38340 Fragaria vesca HOM05D001663 ORTHO05D005717 9.7e-214 746.9 477 79.7
FAN18G1299 Fragaria x ananassa HOM05D001663 ORTHO05D005717 3.1e-212 741.9 476 79.2
Prupe.1G508500 Prunus persica HOM05D001663 ORTHO05D005717 3.1e-212 741.9 479 78.7
FAN08G2783 Fragaria x ananassa HOM05D001663 ORTHO05D005717 1.5e-211 739.6 476 79.2
GSVIVG01008963001 Vitis vinifera HOM05D001663 ORTHO05D005717 3.4e-211 738.4 479 77.2
Rhsim07G0199300 Rhododendron simsii HOM05D001663 ORTHO05D005717 1.0e-210 736.9 481 77.3
Manes.18G101600 Manihot esculenta HOM05D001663 ORTHO05D005717 1.7e-210 736.1 479 77.7
FAN04G0194 Fragaria x ananassa HOM05D001663 ORTHO05D005717 3.8e-210 734.9 474 79.1
COL.COLO4_16510 Corchorus olitorius HOM05D001663 ORTHO05D005717 1.4e-209 733.0 479 77.5
Duzib041G0602 Durio zibethinus HOM05D001663 ORTHO05D005717 7.2e-209 730.7 479 76.2
CiPaw.05G231300 Carya illinoinensis HOM05D001663 ORTHO05D005717 7.9e-208 727.2 474 78.3
RhsimUnG0073000 Rhododendron simsii HOM05D001663 ORTHO05D005717 7.9e-208 727.2 481 76.9
PGR042G1550 Punica granatum HOM05D001663 ORTHO05D005717 1.0e-207 726.9 477 77.6
vmacro04774 Vaccinium macrocarpon HOM05D001663 ORTHO05D005717 3.9e-207 724.9 515 72.6
TAR376G0684 Trochodendron aralioides HOM05D001663 ORTHO05D005717 4.4e-206 721.5 479 76.0
Thecc.08G114700 Theobroma cacao HOM05D001663 ORTHO05D005717 9.7e-206 720.3 479 75.8
QL12p035556 Quercus lobata HOM05D001663 ORTHO05D005717 1.4e-204 716.5 478 77.4
Duzib093G0504 Durio zibethinus HOM05D001663 ORTHO05D005717 1.8e-204 716.1 479 74.7
Cpa.g.sc1782.1 Carica papaya HOM05D001663 ORTHO05D005717 7.0e-204 714.1 479 75.8
CSS0006833 Camellia sinensis var. sinensis HOM05D001663 ORTHO05D005717 1.2e-203 713.4 480 76.9
Gorai.005G092500 Gossypium raimondii HOM05D001663 ORTHO05D005717 1.3e-202 709.9 479 74.1
MD08G1174500 Malus domestica HOM05D001663 ORTHO05D005717 2.9e-202 708.8 477 77.1
Nn5g28968 Nelumbo nucifera HOM05D001663 ORTHO05D005717 3.8e-202 708.4 479 74.9
Lalb_Chr10g0102081 Lupinus albus HOM05D001663 ORTHO05D005717 2.5e-201 705.7 479 74.9
Ca_26536_v3 Cicer arietinum L. HOM05D001663 ORTHO05D005717 3.2e-201 705.3 479 75.6
Sabra02G0071900 Salix brachista HOM05D001663 ORTHO05D005717 4.2e-201 704.9 496 73.8
MD15G1361100 Malus domestica HOM05D001663 ORTHO05D005717 9.4e-201 703.7 478 77.2
Phvul.008G169200 Phaseolus vulgaris HOM05D001663 ORTHO05D005717 1.6e-200 703.0 480 74.8
Gohir.D05G269900 Gossypium hirsutum HOM05D001663 ORTHO05D005717 2.1e-200 702.6 479 73.9
Hma1.2p1_0529F.1_g173150 Hydrangea macrophylla HOM05D001663 ORTHO05D005717 2.1e-200 702.6 481 74.0
TWI12G1423 Tripterygium wilfordii HOM05D001663 ORTHO05D005717 2.1e-200 702.6 480 75.6
Gorai.009G282600 Gossypium raimondii HOM05D001663 ORTHO05D005717 2.7e-200 702.2 479 73.9
Nn1g05239 Nelumbo nucifera HOM05D001663 ORTHO05D005717 2.7e-200 702.2 479 73.9
Gohir.A02G075400 Gossypium hirsutum HOM05D001663 ORTHO05D005717 3.6e-200 701.8 479 73.1
Cc10_g06030 Coffea canephora HOM05D001663 ORTHO05D005717 3.0e-199 698.7 480 72.1
HanXRQChr05g0162261 Helianthus annuus HOM05D001663 ORTHO05D005717 3.9e-199 698.4 479 73.5
Lj1g0004140 Lotus japonicus HOM05D001663 ORTHO05D005717 5.2e-199 698.0 479 74.3
TPR.G30426 Trifolium pratense HOM05D001663 ORTHO05D005717 5.2e-199 698.0 479 74.5
Potri.002G090900 Populus trichocarpa HOM05D001663 ORTHO05D005717 1.1e-198 696.8 479 74.9
TWI56G1202 Tripterygium wilfordii HOM05D001663 ORTHO05D005717 4.4e-198 694.9 479 73.5
CANSAT25G1457 Cannabis sativa HOM05D001663 ORTHO05D005717 2.8e-197 692.2 479 73.3
Medtr5g061040 Medicago truncatula HOM05D001663 ORTHO05D005717 1.1e-196 690.3 475 73.7
PSO210G6007 Papaver somniferum HOM05D001663 ORTHO05D005717 1.4e-196 689.9 479 72.7
PSO447G0047 Papaver somniferum HOM05D001663 ORTHO05D005717 2.4e-196 689.1 479 72.7
Solyc04g072440.4 Solanum lycopersicum HOM05D001663 ORTHO05D005717 1.2e-195 686.8 485 70.9
Sopen04g028600 Solanum pennellii HOM05D001663 ORTHO05D005717 2.6e-195 685.6 485 70.7
ECA246G3782 Erigeron canadensis HOM05D001663 ORTHO05D005717 1.3e-194 683.3 479 73.1
CAN.G617.5 Capsicum annuum HOM05D001663 ORTHO05D005717 2.9e-194 682.2 485 70.9
Glyma.13G085400 Glycine max HOM05D001663 ORTHO05D005717 2.9e-194 682.2 479 73.9
PGSC0003DMG400027563 Solanum tuberosum HOM05D001663 ORTHO05D005717 2.9e-194 682.2 485 70.5
Nitab4.5_0001915g0140 Nicotiana tabacum HOM05D001663 ORTHO05D005717 3.8e-194 681.8 481 71.7
Lalb_Chr04g0253241 Lupinus albus HOM05D001663 ORTHO05D005717 1.1e-193 680.2 479 73.1
Nitab4.5_0004952g0050 Nicotiana tabacum HOM05D001663 ORTHO05D005717 4.2e-193 678.3 477 72.1
Migut.C00211 Erythranthe guttata HOM05D001663 ORTHO05D005717 7.2e-193 677.6 478 70.9
Gohir.D02G082500 Gossypium hirsutum HOM05D001663 ORTHO05D005717 9.4e-193 677.2 480 71.2
arahy.Tifrunner.gnm1.ann1.7M6WCL Arachis hypogaea HOM05D001663 ORTHO05D005717 2.7e-192 675.6 479 72.4
DCAR_003554 Daucus carota HOM05D001663 ORTHO05D005717 1.5e-190 669.8 470 71.5
Haze_00550 Corylus avellana HOM05D001663 ORTHO05D005717 2.6e-190 669.1 474 74.5
Aqoxy3G00244 Aquilegia oxysepala HOM05D001663 ORTHO05D005717 5.7e-190 667.9 510 68.2
MSTRG.24955 Avicennia marina HOM05D001663 ORTHO05D005717 9.8e-190 667.2 478 72.0
RcHm_v2.0_Chr7g0240361 Rosa chinensis HOM05D001663 ORTHO05D005717 2.8e-189 665.6 421 80.5
Thhalv10028627m.g Eutrema salsugineum HOM05D001663 ORTHO05D005717 2.4e-188 662.5 480 70.8
THA.LOC104816946 Tarenaya hassleriana HOM05D001663 ORTHO05D005717 1.3e-186 656.8 481 70.3
Aa31LG9G14450 Aethionema arabicum HOM05D001663 ORTHO05D005717 2.9e-186 655.6 480 70.4
THA.LOC104813136 Tarenaya hassleriana HOM05D001663 ORTHO05D005717 4.2e-185 651.7 478 70.7
EL10Ac8g18308 Beta vulgaris HOM05D001663 ORTHO05D005717 1.2e-184 650.2 480 69.2
Ah.09g230050 Amaranthus hybridus HOM05D001663 ORTHO05D005717 2.7e-184 649.0 477 69.6
Sp6g09330 Schrenkiella parvula HOM05D001663 ORTHO05D005717 4.0e-183 645.2 480 69.4
CARHR259570 Cardamine hirsuta HOM05D001663 ORTHO05D005717 1.5e-182 643.3 480 69.6
AT4G08540 Arabidopsis thaliana HOM05D001663 ORTHO05D005717 4.4e-182 641.7 480 68.8
BcaB01g01352 Brassica carinata HOM05D001663 ORTHO05D005717 4.1e-180 635.2 480 68.5
Lsat_1_v5_gn_6_102021 Lactuca sativa HOM05D001663 ORTHO05D005717 9.1e-180 634.0 486 67.9
BcaC04g20910 Brassica carinata HOM05D001663 ORTHO05D005717 2.7e-179 632.5 480 68.3
C09p38040 Brassica napus HOM05D001663 ORTHO05D005717 2.7e-179 632.5 480 68.3
BolC9t56640H Brassica oleracea HOM05D001663 ORTHO05D005717 2.7e-179 632.5 480 68.3
A09p30170 Brassica napus HOM05D001663 ORTHO05D005717 4.5e-179 631.7 480 67.9
Cfa015941 Carpinus fangiana HOM05D001663 ORTHO05D005717 2.9e-178 629.0 474 72.2
SalBow7G1241 Salvia bowleyana HOM05D001663 ORTHO05D005717 4.2e-177 625.2 534 62.5
Carub.0006s2708 Capsella rubella HOM05D001663 ORTHO05D005717 2.8e-176 622.5 480 67.5
MSTRG.947 Avicennia marina HOM05D001663 ORTHO05D005717 8.0e-176 620.9 478 68.6
Glyma.14G167200 Glycine max HOM05D001663 ORTHO05D005717 1.7e-173 613.2 410 75.6
CsaV3_2G033570 Cucumis sativus L. HOM05D001663 ORTHO05D005717 5.4e-172 608.2 479 67.2
MELO3C008130.2 Cucumis melo HOM05D001663 ORTHO05D005717 7.0e-172 607.8 478 66.9
Lj6A263G20 Lonicera japonica HOM05D001663 ORTHO05D005717 7.8e-171 604.4 479 66.2
Peaxi162Scf00756g00434 Petunia axillaris HOM05D001663 ORTHO05D005717 3.9e-170 602.1 469 66.3
SGA_v2.0_scaffold48G18009 Striga asiatica HOM05D001663 ORTHO05D005717 5.0e-170 601.7 478 65.7
Sed0003415 Sechium edule HOM05D001663 ORTHO05D005717 1.5e-169 600.1 478 65.9
AUR62033240 Chenopodium quinoa HOM05D001663 ORTHO05D005717 2.1e-168 596.3 423 71.2
FAN13G3230 Fragaria x ananassa HOM05D001663 ORTHO05D005717 8.0e-168 594.3 479 66.8
Actinidia29571 Actinidia chinensis HOM05D001663 ORTHO05D005717 3.4e-166 589.0 442 69.9
ClCG11G008030 Citrullus lanatus HOM05D001663 ORTHO05D005717 2.9e-165 585.9 496 63.3
CSS0003227 Camellia sinensis var. sinensis HOM05D001663 ORTHO05D005717 3.0e-162 575.9 376 77.4
Hund26324 Selenicereus undatus HOM05D001663 ORTHO05D005717 3.0e-162 575.9 383 75.2
AL6G42350 Arabidopsis lyrata HOM05D001663 ORTHO05D005717 2.1e-160 569.7 480 64.0
Psat2g076640 Pisum sativum HOM05D001663 ORTHO05D005717 1.8e-159 566.6 411 72.5
Atru.chr13.1295 Acer truncatum HOM05D001663 ORTHO05D005717 3.4e-158 562.4 375 78.7
BraA09t38581Z Brassica rapa HOM05D001663 ORTHO05D005717 1.7e-154 550.1 580 54.3
Sc18g0007560 Simmondsia chinensis HOM05D001663 ORTHO05D005717 2.2e-149 533.1 376 70.7
ATR0564G349 Amborella trichopoda HOM05D001663 ORTHO05D005717 1.9e-148 530.0 486 58.6
Dinv13062 Davidia involucrata HOM05D001663 ORTHO05D005717 1.1e-143 514.2 338 77.8
AUR62021323 Chenopodium quinoa HOM05D001663 ORTHO05D005717 3.8e-141 505.8 480 57.5
Gohir.A05G268300 Gossypium hirsutum HOM05D001663 ORTHO05D005717 1.0e-138 497.7 311 78.8
CDE05G2350 Ceratophyllum demersum HOM05D001663 ORTHO05D005717 4.6e-131 472.2 344 68.6
MBI02_g34272_MAGBIO Magnolia biondii HOM05D001663 ORTHO05D005717 8.7e-130 468.0 316 75.0
Oeu035400.3 Olea europaea HOM05D001663 ORTHO05D005717 9.0e-127 458.0 809 37.7
unitig_747.g21547 Utricularia gibba HOM05D001663 ORTHO05D005717 3.7e-120 436.0 477 51.4
HPP92_009232 Vanilla planifolia HOM05D001663 ORTHO05D005717 1.8e-119 433.7 375 58.1
Carub.0002s2479 Capsella rubella HOM05D001663 ORTHO05D005717 7.4e-113 411.8 451 51.9
AL2G38170 Arabidopsis lyrata HOM05D001663 ORTHO05D005717 1.6e-112 410.6 459 50.8
CARHR071380 Cardamine hirsuta HOM05D001663 ORTHO05D005717 2.6e-110 403.3 457 49.0
BolC6t40206H Brassica oleracea HOM05D001663 ORTHO05D005717 1.4e-108 397.5 452 50.7
AT1G77890 Arabidopsis thaliana HOM05D001663 ORTHO05D005717 1.9e-108 397.1 459 50.3
Aa31LG4G7980 Aethionema arabicum HOM05D001663 ORTHO05D005717 1.2e-107 394.4 467 49.9
BraA07t31838Z Brassica rapa HOM05D001663 ORTHO05D005717 6.1e-107 392.1 452 50.0
Zm00001eb327970 Zea mays HOM05D001663 ORTHO05D005717 1.0e-106 391.3 445 49.9
Sp5g33060 Schrenkiella parvula HOM05D001663 ORTHO05D005717 6.3e-104 382.1 449 49.0
Zm00001eb109770 Zea mays HOM05D001663 ORTHO05D005717 1.1e-103 381.3 406 51.7
BcaB03g15913 Brassica carinata HOM05D001663 ORTHO05D005717 3.4e-102 376.3 452 49.1
Os07g0626300 Oryza sativa ssp. japonica HOM05D001663 ORTHO05D005717 3.8e-101 372.9 403 51.6
C06p51850 Brassica napus HOM05D001663 ORTHO05D005717 5.1e-98 362.5 369 53.4
A07p43160 Brassica napus HOM05D001663 ORTHO05D005717 2.5e-97 360.1 368 53.0
arahy.Tifrunner.gnm1.ann1.8X036G Arachis hypogaea HOM05D001663 ORTHO05D005717 3.7e-96 356.3 249 73.1
Pp3c5_11170 Physcomitrium patens HOM05D001663 ORTHO05D005717 1.0e-90 338.2 502 42.8
VMungo0647G1200 Vigna mungo HOM05D001663 ORTHO05D005717 1.1e-87 328.2 228 71.9
arahy.Tifrunner.gnm1.ann1.ZLN6KV Arachis hypogaea HOM05D001663 ORTHO05D005717 2.6e-86 323.6 240 69.6
Thhalv10018451m.g Eutrema salsugineum HOM05D001663 ORTHO05D005717 8.0e-83 312.0 449 45.0
Mapoly0103s0077 Marchantia polymorpha HOM05D001663 ORTHO05D005717 1.8e-79 300.8 491 39.5
Actinidia33165 Actinidia chinensis HOM05D001663 ORTHO05D005717 1.2e-75 288.1 250 60.0
SEGI_08259 Sequoiadendron giganteum HOM05D001663 ORTHO05D005717 5.6e-60 236.1 310 45.5
SEGI_31098 Sequoiadendron giganteum HOM05D001663 ORTHO05D005717 5.0e-53 213.0 200 56.0
MBI02_g34271_MAGBIO Magnolia biondii HOM05D001663 ORTHO05D005717 8.0e-51 205.7 191 58.6
AagrBONN_evm.TU.Sc2ySwM_344.1096 Anthoceros agrestis HOM05D001663 ORTHO05D005717 1.3e-45 188.3 447 32.2
CBR_g4197 Chara braunii HOM05D001663 ORTHO05D005717 2.3e-45 187.6 525 30.5
BcaC08g47627 Brassica carinata HOM05D001663 ORTHO05D005717 1.9e-44 184.5 203 50.7
Atru.chr13.1296 Acer truncatum HOM05D001663 ORTHO05D005717 3.4e-41 173.7 102 81.4
Actinidia33166 Actinidia chinensis HOM05D001663 ORTHO05D005717 1.2e-38 165.2 106 73.6
Dinv13063 Davidia involucrata HOM05D001663 ORTHO05D005717 1.8e-18 98.2 77 68.8
Zm00001eb031630 Zea mays HOM05D001663 ORTHO05D005717 4.5e-17 93.6 143 37.8
CDE05G1781 Ceratophyllum demersum HOM05D001663 ORTHO05D005717 2.2e-16 91.3 90 51.1
Cre08.g377600 Chlamydomonas reinhardtii HOM05D001663 ORTHO05D005717 7.1e-07 59.7 366 21.6
HanXRQChr01g0001151 Helianthus annuus HOM05D001663 ORTHO05D005717 7.1e-07 59.7 141 35.5
SEGI_07227 Sequoiadendron giganteum HOM05D001663 ORTHO05D015595 1.6e-06 58.5 79 40.5


User provided reference genes

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