Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.H00899 Eucalyptus grandis HOM05D006913 ORTHO05D008720 3.0e-91 338.6 180 100.0
TWI59G1195 Tripterygium wilfordii HOM05D006913 ORTHO05D008720 6.1e-52 208.0 196 62.8
TAR362G1022 Trochodendron aralioides HOM05D006913 ORTHO05D008720 2.4e-48 196.1 193 63.2
Thecc.01G320200 Theobroma cacao HOM05D006913 ORTHO05D008720 2.6e-47 192.6 172 66.3
CiPaw.07G121500 Carya illinoinensis HOM05D006913 ORTHO05D008720 1.3e-46 190.3 196 58.7
Cfa004859 Carpinus fangiana HOM05D006913 ORTHO05D008720 1.7e-46 189.9 197 57.9
Haze_05096 Corylus avellana HOM05D006913 ORTHO05D008720 1.7e-46 189.9 197 58.4
Duzib138G1774 Durio zibethinus HOM05D006913 ORTHO05D008720 5.0e-46 188.3 176 64.2
Dinv12109 Davidia involucrata HOM05D006913 ORTHO05D008720 3.2e-45 185.7 198 59.1
Aqoxy5G02741 Aquilegia oxysepala HOM05D006913 ORTHO05D008720 7.2e-45 184.5 149 67.1
PGR083G1650 Punica granatum HOM05D006913 ORTHO05D008720 1.6e-44 183.3 221 53.8
FvH4_1g26590 Fragaria vesca HOM05D006913 ORTHO05D008720 2.1e-44 183.0 196 56.1
GSVIVG01028181001 Vitis vinifera HOM05D006913 ORTHO05D008720 2.1e-44 183.0 153 68.6
CSS0013168 Camellia sinensis var. sinensis HOM05D006913 ORTHO05D008720 6.1e-44 181.4 197 57.4
Atru.chr5.924 Acer truncatum HOM05D006913 ORTHO05D008720 8.0e-44 181.0 198 55.6
FAN28G1862 Fragaria x ananassa HOM05D006913 ORTHO05D008720 8.0e-44 181.0 196 55.6
Rhsim01G0292800 Rhododendron simsii HOM05D006913 ORTHO05D008720 8.0e-44 181.0 156 66.7
Prupe.3G005300 Prunus persica HOM05D006913 ORTHO05D008720 1.0e-43 180.6 195 57.4
CSS0007691 Camellia sinensis var. sinensis HOM05D006913 ORTHO05D008720 1.4e-43 180.3 197 57.4
Hma1.2p1_0408F.1_g146440 Hydrangea macrophylla HOM05D006913 ORTHO05D008720 2.3e-43 179.5 203 57.1
QL12p018506 Quercus lobata HOM05D006913 ORTHO05D008720 2.3e-43 179.5 148 67.6
Lj1g0024926 Lotus japonicus HOM05D006913 ORTHO05D008720 4.0e-43 178.7 196 56.6
MBI18_g09652_MAGBIO Magnolia biondii HOM05D006913 ORTHO05D008720 4.0e-43 178.7 199 57.3
Ciclev10022378m.g Citrus clementina HOM05D006913 ORTHO05D008720 5.2e-43 178.3 199 57.8
MD17G1280100 Malus domestica HOM05D006913 ORTHO05D008720 5.2e-43 178.3 153 66.0
Manes.01G231800 Manihot esculenta HOM05D006913 ORTHO05D008720 5.2e-43 178.3 147 69.4
MBI18_g11536_MAGBIO Magnolia biondii HOM05D006913 ORTHO05D008720 8.8e-43 177.6 157 66.2
Cpa.g.c29544.2 Carica papaya HOM05D006913 ORTHO05D008720 1.5e-42 176.8 176 61.4
PSO170G2504 Papaver somniferum HOM05D006913 ORTHO05D008720 2.0e-42 176.4 152 64.5
MSTRG.21716 Avicennia marina HOM05D006913 ORTHO05D008720 2.6e-42 176.0 154 63.6
Migut.D00043 Erythranthe guttata HOM05D006913 ORTHO05D008720 2.6e-42 176.0 199 54.8
PSO724G1078 Papaver somniferum HOM05D006913 ORTHO05D008720 2.6e-42 176.0 152 63.8
Nn3g21840 Nelumbo nucifera HOM05D006913 ORTHO05D008720 4.4e-42 175.3 195 56.4
RcHm_v2.0_Chr3g0486731 Rosa chinensis HOM05D006913 ORTHO05D008720 5.7e-42 174.9 194 55.7
PGSC0003DMG400007277 Solanum tuberosum HOM05D006913 ORTHO05D008720 5.7e-42 174.9 147 67.3
Solyc06g009400.3 Solanum lycopersicum HOM05D006913 ORTHO05D008720 9.7e-42 174.1 147 67.3
THA.LOC104801315 Tarenaya hassleriana HOM05D006913 ORTHO05D008720 1.7e-41 173.3 153 64.1
Sopen06g004130 Solanum pennellii HOM05D006913 ORTHO05D008720 2.2e-41 172.9 147 66.7
SalBow3G0392 Salvia bowleyana HOM05D006913 ORTHO05D008720 2.8e-41 172.6 197 54.8
CDE11G0810 Ceratophyllum demersum HOM05D006913 ORTHO05D008720 4.8e-41 171.8 150 65.3
FAN19G0677 Fragaria x ananassa HOM05D006913 ORTHO05D008720 4.8e-41 171.8 228 48.7
FAN26G0114 Fragaria x ananassa HOM05D006913 ORTHO05D008720 4.8e-41 171.8 228 48.7
MELO3C023629.2 Cucumis melo HOM05D006913 ORTHO05D008720 6.3e-41 171.4 144 66.0
Sc05g0000220 Simmondsia chinensis HOM05D006913 ORTHO05D008720 6.3e-41 171.4 148 64.2
CAN.G1280.40 Capsicum annuum HOM05D006913 ORTHO05D008720 8.2e-41 171.0 152 64.5
Lalb_Chr04g0260061 Lupinus albus HOM05D006913 ORTHO05D008720 1.1e-40 170.6 178 56.7
ATR0693G068 Amborella trichopoda HOM05D006913 ORTHO05D008720 1.4e-40 170.2 147 62.6
arahy.Tifrunner.gnm1.ann1.IRZ7G5 Arachis hypogaea HOM05D006913 ORTHO05D008720 1.4e-40 170.2 138 66.7
CsaV3_7G030270 Cucumis sativus L. HOM05D006913 ORTHO05D008720 1.8e-40 169.9 144 65.3
Dinv33147 Davidia involucrata HOM05D006913 ORTHO05D008720 1.8e-40 169.9 195 56.4
Nitab4.5_0003324g0110 Nicotiana tabacum HOM05D006913 ORTHO05D008720 1.8e-40 169.9 160 62.5
Sed0008492 Sechium edule HOM05D006913 ORTHO05D008720 2.4e-40 169.5 146 66.4
Glyma.03G222100 Glycine max HOM05D006913 ORTHO05D008720 3.1e-40 169.1 200 52.0
Glyma.19G219300 Glycine max HOM05D006913 ORTHO05D008720 3.1e-40 169.1 182 56.6
MD09G1287900 Malus domestica HOM05D006913 ORTHO05D008720 3.1e-40 169.1 192 56.8
Peaxi162Scf00058g00218 Petunia axillaris HOM05D006913 ORTHO05D008720 3.1e-40 169.1 141 68.1
Potri.002G191300 Populus trichocarpa HOM05D006913 ORTHO05D008720 3.1e-40 169.1 197 53.8
Nitab4.5_0000363g0020 Nicotiana tabacum HOM05D006913 ORTHO05D008720 7.0e-40 167.9 160 61.9
Sed0005932 Sechium edule HOM05D006913 ORTHO05D008720 1.6e-39 166.8 139 68.3
arahy.Tifrunner.gnm1.ann1.6PPK8V Arachis hypogaea HOM05D006913 ORTHO05D008720 3.5e-39 165.6 146 63.7
VMungo1383G0882 Vigna mungo HOM05D006913 ORTHO05D008720 3.5e-39 165.6 146 63.7
CiPaw.08G086000 Carya illinoinensis HOM05D006913 ORTHO05D008720 4.5e-39 165.2 188 58.0
DCAR_002917 Daucus carota HOM05D006913 ORTHO05D008720 4.5e-39 165.2 142 64.1
Medtr7g109970 Medicago truncatula HOM05D006913 ORTHO05D008720 7.7e-39 164.5 194 52.1
HPP92_002654 Vanilla planifolia HOM05D006913 ORTHO05D008720 1.0e-38 164.1 153 63.4
TPR.G4038 Trifolium pratense HOM05D006913 ORTHO05D008720 2.9e-38 162.5 150 60.7
AL6G51370 Arabidopsis lyrata HOM05D006913 ORTHO05D008720 3.8e-38 162.2 181 56.9
ClCG09G004810 Citrullus lanatus HOM05D006913 ORTHO05D008720 3.8e-38 162.2 171 56.1
vmacro15097 Vaccinium macrocarpon HOM05D006913 ORTHO05D008720 6.5e-38 161.4 106 82.1
Carub.0006s3531 Capsella rubella HOM05D006913 ORTHO05D008720 2.5e-37 159.5 149 63.1
AT4G01900 Arabidopsis thaliana HOM05D006913 ORTHO05D008720 1.6e-36 156.8 202 53.0
Psat3g018680 Pisum sativum HOM05D006913 ORTHO05D008720 1.6e-36 156.8 174 56.3
BcaB01g02398 Brassica carinata HOM05D006913 ORTHO05D008720 3.6e-36 155.6 149 62.4
Nitab4.5_0000222g0190 Nicotiana tabacum HOM05D006913 ORTHO05D008720 4.7e-36 155.2 152 62.5
COL.COLO4_23180 Corchorus olitorius HOM05D006913 ORTHO05D008720 8.0e-36 154.5 104 78.8
unitig_578.g16634 Utricularia gibba HOM05D006913 ORTHO05D008720 1.0e-35 154.1 155 57.4
AUR62024592 Chenopodium quinoa HOM05D006913 ORTHO05D008720 1.4e-35 153.7 111 73.9
BcaC01g06792 Brassica carinata HOM05D006913 ORTHO05D008720 2.3e-35 152.9 143 63.6
C03p38310 Brassica napus HOM05D006913 ORTHO05D008720 2.3e-35 152.9 143 63.6
BolC3t16112H Brassica oleracea HOM05D006913 ORTHO05D008720 2.3e-35 152.9 143 63.6
BraA03t12321Z Brassica rapa HOM05D006913 ORTHO05D008720 2.3e-35 152.9 143 63.6
Sp6g01770 Schrenkiella parvula HOM05D006913 ORTHO05D008720 3.0e-35 152.5 140 63.6
Thhalv10028983m.g Eutrema salsugineum HOM05D006913 ORTHO05D008720 4.0e-35 152.1 143 63.6
A03p31400 Brassica napus HOM05D006913 ORTHO05D008720 6.8e-35 151.4 149 61.1
Os05g0133100 Oryza sativa ssp. japonica HOM05D006913 ORTHO05D008720 6.8e-35 151.4 141 60.3
Aa31LG5G1440 Aethionema arabicum HOM05D006913 ORTHO05D008720 8.8e-35 151.0 172 55.2
Sabra02G0164300 Salix brachista HOM05D006913 ORTHO05D008720 8.8e-35 151.0 183 51.9
Solyc01g015000.3 Solanum lycopersicum HOM05D006913 ORTHO05D008720 3.4e-34 149.1 107 76.6
BcaB01g02393 Brassica carinata HOM05D006913 ORTHO05D008720 4.4e-34 148.7 134 64.2
Cc01_g21970 Coffea canephora HOM05D006913 ORTHO05D008720 9.8e-34 147.5 132 64.4
Lj1C13T3 Lonicera japonica HOM05D006913 ORTHO05D008720 2.2e-33 146.4 102 79.4
Eucgr.L01805 Eucalyptus grandis HOM05D006913 ORTHO05D008720 2.4e-32 142.9 142 62.7
Pp3c4_15530 Physcomitrium patens HOM05D006913 ORTHO05D008720 4.1e-32 142.1 204 47.5
AagrBONN_evm.TU.Sc2ySwM_228.182 Anthoceros agrestis HOM05D006913 ORTHO05D008720 1.0e-30 137.5 107 67.3
Ca_09230_v3 Cicer arietinum L. HOM05D006913 ORTHO05D008720 1.3e-30 137.1 97 74.2
FAN23G2363 Fragaria x ananassa HOM05D000049 ORTHO05D000027 2.9e-30 136.0 218 44.0
SMO364G0946 Selaginella moellendorffii HOM05D006913 ORTHO05D008720 2.9e-30 136.0 103 68.9
Mapoly0061s0127 Marchantia polymorpha HOM05D006913 ORTHO05D008720 6.5e-30 134.8 128 58.6
Duzib211G0548 Durio zibethinus HOM05D006913 ORTHO05D008720 8.0e-28 127.9 106 67.0
Hund09668 Selenicereus undatus HOM05D006913 ORTHO05D008720 3.4e-26 122.5 122 56.6
SEGI_19322 Sequoiadendron giganteum HOM05D006913 ORTHO05D008720 9.2e-24 114.4 93 68.8
SGA_v2.0_scaffold80G25710 Striga asiatica HOM05D006913 ORTHO05D008720 4.5e-23 112.1 109 60.6
GSVIVG01010608001 Vitis vinifera HOM05D006913 ORTHO05D008720 2.3e-22 109.8 65 90.8
GSVIVG01037028001 Vitis vinifera HOM05D006913 ORTHO05D008720 2.3e-22 109.8 65 90.8
CARHR249910 Cardamine hirsuta HOM05D006913 ORTHO05D008720 2.1e-20 103.2 79 70.9
Oeu038057.1 Olea europaea HOM05D006913 ORTHO05D008720 6.1e-20 101.7 140 47.9
Hma1.2p1_3252F.1_g334540 Hydrangea macrophylla HOM05D006913 ORTHO05D008720 2.3e-19 99.8 59 88.1
Phvul.001G215500 Phaseolus vulgaris HOM05D006913 ORTHO05D008720 3.0e-19 99.4 123 48.0
Cre07.g357350 Chlamydomonas reinhardtii HOM05D006913 ORTHO05D008720 4.1e-16 89.0 127 42.5
MCO04G045 Micromonas commoda HOM05D006913 ORTHO05D008720 9.2e-16 87.8 106 49.1
HPP92_027923 Vanilla planifolia HOM05D006913 ORTHO05D008720 1.7e-14 83.6 63 71.4
Nitab4.5_0001013g0020 Nicotiana tabacum HOM05D006913 ORTHO05D008720 1.5e-10 70.5 75 53.3
HPP92_027922 Vanilla planifolia HOM05D006913 ORTHO05D008720 5.8e-10 68.6 82 51.2
Haze_27360 Corylus avellana HOM05D006913 ORTHO05D008720 1.6e-07 60.5 90 38.9


User provided reference genes

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