Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.H00879 Eucalyptus grandis HOM05D006015 ORTHO05D007816 1.5e-261 905.6 429 100.0
PGR083G2314 Punica granatum HOM05D006015 ORTHO05D007816 2.4e-195 685.6 427 75.2
Dinv26607 Davidia involucrata HOM05D006015 ORTHO05D007816 3.8e-193 678.3 430 73.0
CiPaw.04G196900 Carya illinoinensis HOM05D006015 ORTHO05D007816 6.5e-193 677.6 428 74.5
QL04p068533 Quercus lobata HOM05D006015 ORTHO05D007816 1.9e-192 676.0 428 73.1
Gohir.A11G149000 Gossypium hirsutum HOM05D006015 ORTHO05D007816 3.2e-192 675.2 420 74.5
Ciclev10015287m.g Citrus clementina HOM05D006015 ORTHO05D007816 9.3e-192 673.7 430 73.3
COL.COLO4_33334 Corchorus olitorius HOM05D006015 ORTHO05D007816 1.3e-190 669.8 427 73.8
Thecc.01G195800 Theobroma cacao HOM05D006015 ORTHO05D007816 1.3e-190 669.8 429 73.7
Duzib211G0350 Durio zibethinus HOM05D006015 ORTHO05D007816 5.1e-190 667.9 429 72.7
Gorai.007G166200 Gossypium raimondii HOM05D006015 ORTHO05D007816 5.1e-190 667.9 426 72.8
Gohir.D11G156100 Gossypium hirsutum HOM05D006015 ORTHO05D007816 1.9e-189 666.0 426 72.8
Duzib138G1954 Durio zibethinus HOM05D006015 ORTHO05D007816 2.5e-189 665.6 430 73.5
Cfa014228 Carpinus fangiana HOM05D006015 ORTHO05D007816 4.3e-189 664.8 425 73.9
Sabra14G0127200 Salix brachista HOM05D006015 ORTHO05D007816 4.8e-188 661.4 425 73.6
Ca_25000_v3 Cicer arietinum L. HOM05D006015 ORTHO05D007816 1.8e-187 659.4 432 71.5
Ca_30801_v3 Cicer arietinum L. HOM05D006015 ORTHO05D007816 1.8e-187 659.4 432 71.5
VMungo0720G1520 Vigna mungo HOM05D006015 ORTHO05D007816 2.0e-186 656.0 432 71.1
Cc08_g02360 Coffea canephora HOM05D006015 ORTHO05D007816 2.6e-186 655.6 429 71.3
Potri.014G167200 Populus trichocarpa HOM05D006015 ORTHO05D007816 2.6e-186 655.6 431 72.6
CSS0001355 Camellia sinensis var. sinensis HOM05D006015 ORTHO05D007816 3.4e-186 655.2 426 72.1
CSS0036117 Camellia sinensis var. sinensis HOM05D006015 ORTHO05D007816 3.4e-186 655.2 426 72.1
Phvul.007G239000 Phaseolus vulgaris HOM05D006015 ORTHO05D007816 5.9e-186 654.4 432 70.6
CSS0038739 Camellia sinensis var. sinensis HOM05D006015 ORTHO05D007816 1.0e-185 653.7 424 72.4
Lj6g0021297 Lotus japonicus HOM05D006015 ORTHO05D007816 6.5e-185 651.0 428 70.6
TWI18G0302 Tripterygium wilfordii HOM05D006015 ORTHO05D007816 8.5e-185 650.6 429 70.4
Gohir.D07G198100 Gossypium hirsutum HOM05D006015 ORTHO05D007816 1.1e-184 650.2 420 71.7
Gorai.001G221700 Gossypium raimondii HOM05D006015 ORTHO05D007816 1.9e-184 649.4 420 71.7
Medtr1g046210 Medicago truncatula HOM05D006015 ORTHO05D007816 3.2e-184 648.7 424 70.0
Rhsim04G0027900 Rhododendron simsii HOM05D006015 ORTHO05D007816 3.2e-184 648.7 424 72.4
MD17G1116800 Malus domestica HOM05D006015 ORTHO05D007816 4.2e-184 648.3 425 70.8
MD09G1126500 Malus domestica HOM05D006015 ORTHO05D007816 9.4e-184 647.1 425 71.1
Atru.chr6.3393 Acer truncatum HOM05D006015 ORTHO05D007816 2.7e-183 645.6 422 72.3
Rhsim06G0176400 Rhododendron simsii HOM05D006015 ORTHO05D007816 2.7e-183 645.6 427 70.0
Oeu064356.1 Olea europaea HOM05D006015 ORTHO05D007816 3.6e-183 645.2 421 71.3
Lalb_Chr03g0036841 Lupinus albus HOM05D006015 ORTHO05D007816 4.6e-183 644.8 431 69.6
Psat6g109000 Pisum sativum HOM05D006015 ORTHO05D007816 6.1e-183 644.4 425 71.3
DCAR_019683 Daucus carota HOM05D006015 ORTHO05D007816 1.0e-182 643.7 426 71.1
TWI75G1720 Tripterygium wilfordii HOM05D006015 ORTHO05D007816 1.4e-182 643.3 421 70.8
CANSAT64G2535 Cannabis sativa HOM05D006015 ORTHO05D007816 1.8e-182 642.9 427 70.5
HanXRQChr11g0329021 Helianthus annuus HOM05D006015 ORTHO05D007816 1.8e-182 642.9 421 72.4
FAN09G3933 Fragaria x ananassa HOM05D006015 ORTHO05D007816 2.3e-182 642.5 423 70.9
Peaxi162Scf00802g00022 Petunia axillaris HOM05D006015 ORTHO05D007816 2.3e-182 642.5 428 69.4
FAN02G2834 Fragaria x ananassa HOM05D006015 ORTHO05D007816 3.9e-182 641.7 423 70.9
Nitab4.5_0001867g0080 Nicotiana tabacum HOM05D006015 ORTHO05D007816 6.7e-182 641.0 428 70.6
Cpa.g.sc136.28 Carica papaya HOM05D006015 ORTHO05D007816 1.5e-181 639.8 418 70.3
FAN05G5154 Fragaria x ananassa HOM05D006015 ORTHO05D007816 1.5e-181 639.8 423 70.9
Migut.K00073 Erythranthe guttata HOM05D006015 ORTHO05D007816 2.0e-181 639.4 430 69.1
PGSC0003DMG400017397 Solanum tuberosum HOM05D006015 ORTHO05D007816 2.0e-181 639.4 421 70.8
FAN14G1195 Fragaria x ananassa HOM05D006015 ORTHO05D007816 3.3e-181 638.6 423 70.4
Manes.12G065800 Manihot esculenta HOM05D006015 ORTHO05D007816 3.3e-181 638.6 420 71.0
Sopen07g024010 Solanum pennellii HOM05D006015 ORTHO05D007816 5.7e-181 637.9 421 70.5
FvH4_6g40640 Fragaria vesca HOM05D006015 ORTHO05D007816 7.4e-181 637.5 423 70.2
TPR.G23976 Trifolium pratense HOM05D006015 ORTHO05D007816 7.4e-181 637.5 433 69.3
Lsat_1_v5_gn_7_96920 Lactuca sativa HOM05D006015 ORTHO05D007816 9.7e-181 637.1 427 70.3
Glyma.10G128800 Glycine max HOM05D006015 ORTHO05D007816 2.2e-180 636.0 429 69.0
Lalb_Chr01g0011281 Lupinus albus HOM05D006015 ORTHO05D007816 2.8e-180 635.6 434 68.4
RcHm_v2.0_Chr2g0156011 Rosa chinensis HOM05D006015 ORTHO05D007816 4.8e-180 634.8 423 69.5
ECA236G0403 Erigeron canadensis HOM05D006015 ORTHO05D007816 6.3e-180 634.4 428 69.9
Solyc07g045470.3 Solanum lycopersicum HOM05D006015 ORTHO05D007816 8.2e-180 634.0 421 70.1
Nn3g19725 Nelumbo nucifera HOM05D006015 ORTHO05D007816 1.8e-179 632.9 427 67.7
Aqoxy1G04250 Aquilegia oxysepala HOM05D006015 ORTHO05D007816 4.1e-179 631.7 430 68.6
THA.LOC104808847 Tarenaya hassleriana HOM05D006015 ORTHO05D007816 1.5e-178 629.8 426 70.0
Nitab4.5_0001701g0190 Nicotiana tabacum HOM05D006015 ORTHO05D007816 4.5e-178 628.2 419 70.4
MELO3C024194.2 Cucumis melo HOM05D006015 ORTHO05D007816 1.3e-177 626.7 424 68.6
Atru.BG.41.p Acer truncatum HOM05D006015 ORTHO05D007816 2.9e-177 625.5 355 79.7
TAR629G2010 Trochodendron aralioides HOM05D006015 ORTHO05D007816 3.8e-177 625.2 421 70.3
Sc21g0000520 Simmondsia chinensis HOM05D006015 ORTHO05D007816 5.0e-177 624.8 425 68.7
MSTRG.10825 Avicennia marina HOM05D006015 ORTHO05D007816 6.5e-177 624.4 421 68.4
Sed0012767 Sechium edule HOM05D006015 ORTHO05D007816 6.5e-177 624.4 432 68.5
Sp3g23770 Schrenkiella parvula HOM05D006015 ORTHO05D007816 1.4e-176 623.2 423 67.4
vmacro12084 Vaccinium macrocarpon HOM05D006015 ORTHO05D007816 1.2e-175 620.2 352 79.3
AUR62029116 Chenopodium quinoa HOM05D006015 ORTHO05D007816 3.6e-175 618.6 416 69.2
AL3G42830 Arabidopsis lyrata HOM05D006015 ORTHO05D007816 1.0e-174 617.1 427 67.9
BcaB08g34500 Brassica carinata HOM05D006015 ORTHO05D007816 1.0e-174 617.1 422 69.0
CsaV3_7G002510 Cucumis sativus L. HOM05D006015 ORTHO05D007816 2.3e-174 615.9 422 68.0
Sed0014474 Sechium edule HOM05D006015 ORTHO05D007816 5.1e-174 614.8 424 67.5
AT2G05320 Arabidopsis thaliana HOM05D006015 ORTHO05D007816 6.7e-174 614.4 430 67.0
CAN.G177.8 Capsicum annuum HOM05D006015 ORTHO05D007816 6.7e-174 614.4 421 68.6
ClCG02G002870 Citrullus lanatus HOM05D006015 ORTHO05D007816 6.7e-174 614.4 424 67.5
MSTRG.6445 Avicennia marina HOM05D006015 ORTHO05D007816 2.0e-173 612.8 434 68.2
Carub.0003s2938 Capsella rubella HOM05D006015 ORTHO05D007816 2.6e-173 612.5 426 67.1
Thhalv10002538m.g Eutrema salsugineum HOM05D006015 ORTHO05D007816 2.6e-173 612.5 417 68.1
PSO302G0043 Papaver somniferum HOM05D006015 ORTHO05D007816 2.6e-173 612.5 427 67.0
Hma1.2p1_0545F.1_g175930 Hydrangea macrophylla HOM05D006015 ORTHO05D007816 4.8e-172 608.2 358 76.8
MBI16_g07770_MAGBIO Magnolia biondii HOM05D006015 ORTHO05D007816 4.8e-172 608.2 431 65.7
PSO210G7679 Papaver somniferum HOM05D006015 ORTHO05D007816 1.4e-171 606.7 423 66.9
Gohir.A07G191800 Gossypium hirsutum HOM05D006015 ORTHO05D007816 3.5e-170 602.1 423 68.1
SGA_v2.0_scaffold94G28455 Striga asiatica HOM05D003478 ORTHO05D004196 4.5e-170 601.7 431 66.1
BcaC01g03165 Brassica carinata HOM05D006015 ORTHO05D007816 2.2e-169 599.4 420 67.6
C03p55440 Brassica napus HOM05D006015 ORTHO05D007816 6.5e-169 597.8 420 67.6
BolC3t17819H Brassica oleracea HOM05D006015 ORTHO05D007816 6.5e-169 597.8 420 67.4
A03p44610 Brassica napus HOM05D006015 ORTHO05D007816 5.5e-168 594.7 423 67.4
BraA03t13594Z Brassica rapa HOM05D006015 ORTHO05D007816 5.5e-168 594.7 423 67.4
CARHR103100 Cardamine hirsuta HOM05D006015 ORTHO05D007816 5.5e-168 594.7 350 76.0
Ah.01g002640 Amaranthus hybridus HOM05D006015 ORTHO05D007816 9.4e-168 594.0 358 74.3
Actinidia07868 Actinidia chinensis HOM05D006015 ORTHO05D007816 2.1e-167 592.8 424 66.7
Aa31LG8G11520 Aethionema arabicum HOM05D006015 ORTHO05D007816 6.1e-167 591.3 421 67.0
ATR0827G116 Amborella trichopoda HOM05D006015 ORTHO05D007816 8.8e-166 587.4 427 63.2
Lj1P796T26 Lonicera japonica HOM05D006015 ORTHO05D007816 1.1e-163 580.5 333 77.2
Lj8P135T89 Lonicera japonica HOM05D006015 ORTHO05D007816 7.0e-163 577.8 339 75.8
unitig_37.g12711 Utricularia gibba HOM05D006015 ORTHO05D007816 2.6e-162 575.9 421 64.1
AUR62015007 Chenopodium quinoa HOM05D006015 ORTHO05D007816 3.8e-161 572.0 395 67.8
Zm00001eb192260 Zea mays HOM05D006015 ORTHO05D007816 6.5e-161 571.2 362 69.9
HPP92_001839 Vanilla planifolia HOM05D006015 ORTHO05D007816 1.9e-160 569.7 357 70.9
Os02g0798100 Oryza sativa ssp. japonica HOM05D006015 ORTHO05D007816 5.5e-160 568.2 362 69.6
SHI10157 Sapria himalayana HOM05D006015 ORTHO05D007816 5.2e-158 561.6 366 69.7
SEGI_05803 Sequoiadendron giganteum HOM05D006015 ORTHO05D007816 6.3e-156 554.7 363 68.9
Migut.J01779 Erythranthe guttata HOM05D006015 ORTHO05D007816 8.2e-156 554.3 363 70.0
CDE05G3376 Ceratophyllum demersum HOM05D006015 ORTHO05D007816 9.1e-155 550.8 420 62.6
Nn1g02851 Nelumbo nucifera HOM05D006015 ORTHO05D007816 4.5e-154 548.5 416 62.5
Actinidia18833 Actinidia chinensis HOM05D006015 ORTHO05D007816 1.0e-150 537.3 434 61.5
Glyma.20G080200 Glycine max HOM05D006015 ORTHO05D007816 6.1e-143 511.5 288 78.1
Prupe.3G198000 Prunus persica HOM05D006015 ORTHO05D007816 7.5e-141 504.6 281 78.3
Pp3c8_6700 Physcomitrium patens HOM05D006015 ORTHO05D007816 1.8e-139 500.0 358 62.3
Pp3c12_25130 Physcomitrium patens HOM05D006015 ORTHO05D007816 1.6e-138 496.9 383 60.1
SMO358G0350 Selaginella moellendorffii HOM05D006015 ORTHO05D007816 2.7e-138 496.1 350 62.6
Mapoly0086s0006 Marchantia polymorpha HOM05D006015 ORTHO05D007816 6.0e-130 468.4 357 60.8
SalBow1G4868 Salvia bowleyana HOM05D006015 ORTHO05D007816 5.2e-118 428.7 322 64.6
MSTRG.26113 Avicennia marina HOM05D006015 ORTHO05D007816 4.9e-100 369.0 213 77.0
AagrBONN_evm.TU.Sc2ySwM_368.1590 Anthoceros agrestis HOM05D006015 ORTHO05D007816 3.2e-99 366.3 356 52.2
SalBow6G1876 Salvia bowleyana HOM05D006015 ORTHO05D007816 1.0e-97 361.3 215 74.0
Hma1.2p1_0545F.1_g175940 Hydrangea macrophylla HOM05D006015 ORTHO05D007816 4.0e-94 349.4 209 74.6
CBR_g52107 Chara braunii HOM05D006015 ORTHO05D000002 1.5e-93 347.4 308 52.9
EL10Ac8g18726 Beta vulgaris HOM05D006015 ORTHO05D007816 3.9e-65 253.1 235 56.2
EL10Ac9g21097 Beta vulgaris HOM05D006015 ORTHO05D006619 8.5e-60 235.3 377 40.3
Nn5g28971 Nelumbo nucifera HOM05D006015 ORTHO05D007816 1.1e-27 128.6 106 55.7
EL10Ac8g18725 Beta vulgaris HOM05D006015 ORTHO05D007816 1.0e-25 122.1 80 65.0
Actinidia35205 Actinidia chinensis HOM05D001060 ORTHO05D000905 6.8e-25 119.4 198 35.4
Aa31LG8G11540 Aethionema arabicum HOM05D006015 ORTHO05D007816 5.6e-19 99.8 123 44.7


User provided reference genes

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