Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.H00876 Eucalyptus grandis HOM05D005849 ORTHO05D004704 3.0e-111 405.2 207 100.0
PGR083G2364 Punica granatum HOM05D005849 ORTHO05D004704 8.1e-16 88.2 227 41.4
Cfa014225 Carpinus fangiana HOM05D005849 ORTHO05D004704 8.9e-15 84.7 210 36.7
Dinv26604 Davidia involucrata HOM05D005849 ORTHO05D004704 8.9e-15 84.7 229 35.8
Sabra14G0127500 Salix brachista HOM05D005849 ORTHO05D004704 1.7e-13 80.5 232 33.6
Haze_12628 Corylus avellana HOM05D005849 ORTHO05D004704 4.9e-13 79.0 210 35.2
QL04p068477 Quercus lobata HOM05D005849 ORTHO05D004704 4.9e-13 79.0 233 36.1
Duzib133G0645 Durio zibethinus HOM05D005849 ORTHO05D004704 1.2e-11 74.3 239 29.3
Potri.014G167700 Populus trichocarpa HOM05D005849 ORTHO05D004704 2.7e-11 73.2 242 33.1
Nn1g03187 Nelumbo nucifera HOM05D005849 ORTHO05D004704 3.5e-11 72.8 226 34.1
Lj8P136T22 Lonicera japonica HOM05D005849 ORTHO05D004704 1.3e-10 70.9 216 33.8
Prupe.3G197400 Prunus persica HOM05D005849 ORTHO05D004704 3.0e-10 69.7 234 29.9
CiPaw.04G197000 Carya illinoinensis HOM05D005849 ORTHO05D004704 5.1e-10 68.9 236 32.6
Manes.13G061900 Manihot esculenta HOM05D005849 ORTHO05D004704 1.5e-09 67.4 226 31.9
TAR629G2787 Trochodendron aralioides HOM05D005849 ORTHO05D004704 1.5e-09 67.4 110 46.4
RcHm_v2.0_Chr2g0155981 Rosa chinensis HOM05D005849 ORTHO05D004704 4.3e-09 65.9 222 29.7
Duzib138G1177 Durio zibethinus HOM05D005849 ORTHO05D004704 2.1e-08 63.5 251 30.7
MD09G1126800 Malus domestica HOM05D005849 ORTHO05D004704 4.7e-08 62.4 226 30.5
Thecc.01G196200 Theobroma cacao HOM05D005849 ORTHO05D004704 6.2e-08 62.0 196 30.1
Gorai.001G222200 Gossypium raimondii HOM05D005849 ORTHO05D004704 8.1e-08 61.6 226 32.3
THA.LOC104808845 Tarenaya hassleriana HOM05D005849 ORTHO05D004704 1.4e-07 60.8 186 31.7
Gohir.D07G198400 Gossypium hirsutum HOM05D005849 ORTHO05D004704 1.8e-07 60.5 226 30.5
CiPaw.03G281900 Carya illinoinensis HOM05D005849 ORTHO05D004704 2.4e-07 60.1 229 34.5
Peaxi162Scf00802g00130 Petunia axillaris HOM05D005849 ORTHO05D004704 2.4e-07 60.1 210 32.4
Phvul.007G121090 Phaseolus vulgaris HOM05D005849 ORTHO05D004704 2.4e-07 60.1 95 40.0
Sed0027972 Sechium edule HOM05D005849 ORTHO05D004704 3.1e-07 59.7 200 32.0
MD17G1117100 Malus domestica HOM05D005849 ORTHO05D004704 4.0e-07 59.3 87 46.0
FvH4_6g40610 Fragaria vesca HOM05D005849 ORTHO05D004704 6.9e-07 58.5 225 30.2
FAN02G2959 Fragaria x ananassa HOM05D005849 ORTHO05D004704 6.9e-07 58.5 226 29.6
FAN14G3262 Fragaria x ananassa HOM05D005849 ORTHO05D004704 6.9e-07 58.5 225 30.2
Lsat_1_v5_gn_9_103781 Lactuca sativa HOM05D005849 ORTHO05D004704 6.9e-07 58.5 179 30.7
FAN05G2424 Fragaria x ananassa HOM05D005849 ORTHO05D004704 9.0e-07 58.2 228 30.3
Nn1g07503 Nelumbo nucifera HOM05D005849 ORTHO05D004704 1.2e-06 57.8 109 38.5
Ciclev10018021m.g Citrus clementina HOM05D005849 ORTHO05D004704 1.5e-06 57.4 94 44.7
Cc03_g07410 Coffea canephora HOM05D005849 ORTHO05D004704 1.5e-06 57.4 92 44.6
ECA240G3450 Erigeron canadensis HOM05D005849 ORTHO05D004704 1.5e-06 57.4 118 35.6
FAN09G2506 Fragaria x ananassa HOM05D005849 ORTHO05D004704 1.5e-06 57.4 219 30.1
TAR629G2911 Trochodendron aralioides HOM05D005849 ORTHO05D004704 1.5e-06 57.4 207 33.3
Rhsim06G0176600 Rhododendron simsii HOM05D005849 ORTHO05D004704 2.6e-06 56.6 216 31.0
COL.COLO4_19617 Corchorus olitorius HOM05D005849 ORTHO05D004704 3.4e-06 56.2 263 27.8
Glyma.13G006500 Glycine max HOM05D005849 ORTHO05D004704 3.4e-06 56.2 224 29.5
Solyc07g045450.1 Solanum lycopersicum HOM05D005849 ORTHO05D004704 3.4e-06 56.2 92 44.6
Sopen07g023990 Solanum pennellii HOM05D005849 ORTHO05D004704 3.4e-06 56.2 92 44.6
Gohir.A07G192100 Gossypium hirsutum HOM05D005849 ORTHO05D004704 4.4e-06 55.8 225 31.6
Oeu064351.1 Olea europaea HOM05D005849 ORTHO05D004704 5.8e-06 55.5 111 38.7
Psat5g104280 Pisum sativum HOM05D005849 ORTHO05D004704 5.8e-06 55.5 195 33.3
Actinidia18832 Actinidia chinensis HOM05D005849 ORTHO05D004704 7.6e-06 55.1 103 40.8
Gohir.A07G169800 Gossypium hirsutum HOM05D005849 ORTHO05D004704 7.6e-06 55.1 237 30.8
Cpa.g.sc136.30 Carica papaya HOM05D005849 ORTHO05D004704 9.9e-06 54.7 257 31.1
Gohir.D07G171100 Gossypium hirsutum HOM05D005849 ORTHO05D004704 9.9e-06 54.7 238 32.4
MBI19_g14891_MAGBIO Magnolia biondii HOM05D005849 ORTHO05D004704 9.9e-06 54.7 152 34.2
Sc20g0004000 Simmondsia chinensis HOM05D005849 ORTHO05D004704 9.9e-06 54.7 85 44.7
TWI36G1699 Tripterygium wilfordii HOM05D005849 ORTHO05D004704 9.9e-06 54.7 243 32.9


User provided reference genes

Program Settings