Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.H00802 Eucalyptus grandis HOM05D005884 ORTHO05D007282 4.6e-104 381.3 206 100.0
PGR044G0377 Punica granatum HOM05D005884 ORTHO05D007282 2.4e-36 156.4 184 57.1
ECA248G2691 Erigeron canadensis HOM05D005884 ORTHO05D007282 3.8e-34 149.1 168 57.1
Cc03_g12390 Coffea canephora HOM05D005884 ORTHO05D007282 5.0e-34 148.7 207 52.7
Thecc.01G227600 Theobroma cacao HOM05D005884 ORTHO05D007282 5.0e-34 148.7 149 58.4
CSS0024949 Camellia sinensis var. sinensis HOM05D005884 ORTHO05D007282 6.5e-34 148.3 132 68.9
Dinv04661 Davidia involucrata HOM05D005884 ORTHO05D007282 6.5e-34 148.3 139 66.2
Manes.13G044700 Manihot esculenta HOM05D005884 ORTHO05D007282 8.6e-34 147.9 122 68.9
Ciclev10022209m.g Citrus clementina HOM05D005884 ORTHO05D007282 1.1e-33 147.5 162 59.3
CSS0032503 Camellia sinensis var. sinensis HOM05D005884 ORTHO05D007282 7.2e-33 144.8 189 54.0
HanXRQChr01g0014641 Helianthus annuus HOM05D005884 ORTHO05D007282 7.2e-33 144.8 147 61.2
CiPaw.03G150900 Carya illinoinensis HOM05D005884 ORTHO05D007282 2.1e-32 143.3 173 56.1
Rhsim01G0257200 Rhododendron simsii HOM05D005884 ORTHO05D007282 4.7e-32 142.1 182 54.9
Nitab4.5_0003790g0020 Nicotiana tabacum HOM05D005884 ORTHO05D007282 8.0e-32 141.4 172 54.1
Dinv19212 Davidia involucrata HOM05D005884 ORTHO05D007282 1.8e-31 140.2 153 56.2
Duzib138G0327 Durio zibethinus HOM05D005884 ORTHO05D007282 4.0e-31 139.0 150 56.7
Lsat_1_v5_gn_5_179880 Lactuca sativa HOM05D005884 ORTHO05D007282 4.0e-31 139.0 135 62.2
CiPaw.04G106200 Carya illinoinensis HOM05D005884 ORTHO05D007282 5.2e-31 138.7 153 57.5
Oeu015899.1 Olea europaea HOM05D005884 ORTHO05D007282 5.2e-31 138.7 157 58.6
Duzib133G0404 Durio zibethinus HOM05D005884 ORTHO05D007282 1.2e-30 137.5 145 59.3
Gohir.A07G156200 Gossypium hirsutum HOM05D005884 ORTHO05D007282 1.2e-30 137.5 154 57.1
Gohir.D07G162500 Gossypium hirsutum HOM05D005884 ORTHO05D007282 1.5e-30 137.1 154 57.8
Gorai.001G186100 Gossypium raimondii HOM05D005884 ORTHO05D007282 1.5e-30 137.1 154 57.8
Nn1g07794 Nelumbo nucifera HOM05D005884 ORTHO05D007282 1.5e-30 137.1 131 64.9
Nitab4.5_0000866g0050 Nicotiana tabacum HOM05D005884 ORTHO05D007282 1.5e-30 137.1 169 54.4
Peaxi162Scf00107g01314 Petunia axillaris HOM05D005884 ORTHO05D007282 2.6e-30 136.3 141 60.3
Lj3g0000124 Lotus japonicus HOM05D005884 ORTHO05D007282 3.4e-30 136.0 140 62.9
Actinidia23729 Actinidia chinensis HOM05D005884 ORTHO05D007282 7.5e-30 134.8 145 62.1
Potri.002G241000 Populus trichocarpa HOM05D005884 ORTHO05D007282 7.5e-30 134.8 183 55.2
TAR362G0919 Trochodendron aralioides HOM05D005884 ORTHO05D007282 9.8e-30 134.4 143 58.7
vmacro14762 Vaccinium macrocarpon HOM05D005884 ORTHO05D007282 1.3e-29 134.0 171 53.8
GSVIVG01028583001 Vitis vinifera HOM05D005884 ORTHO05D007282 2.8e-29 132.9 140 58.6
CAN.G122.4 Capsicum annuum HOM05D005884 ORTHO05D007282 3.7e-29 132.5 92 77.2
TWI18G1166 Tripterygium wilfordii HOM05D005884 ORTHO05D007282 3.7e-29 132.5 152 59.9
arahy.Tifrunner.gnm1.ann1.Q3DN0U Arachis hypogaea HOM05D005884 ORTHO05D007282 4.9e-29 132.1 189 53.4
Sopen09g024260 Solanum pennellii HOM05D005884 ORTHO05D007282 4.9e-29 132.1 126 61.9
Hma1.2p1_0351F.1_g132860 Hydrangea macrophylla HOM05D005884 ORTHO05D007282 6.3e-29 131.7 178 54.5
COL.COLO4_10043 Corchorus olitorius HOM05D003123 ORTHO05D007282 8.3e-29 131.3 174 52.3
Glyma.03G080200 Glycine max HOM05D005884 ORTHO05D007282 1.1e-28 131.0 164 55.5
MD05G1177500 Malus domestica HOM05D005884 ORTHO05D007282 1.1e-28 131.0 135 61.5
Phvul.010G014200 Phaseolus vulgaris HOM05D005884 ORTHO05D007282 1.4e-28 130.6 167 56.3
Ca_20129_v3 Cicer arietinum L. HOM05D005884 ORTHO05D007282 1.8e-28 130.2 141 61.0
Glyma.18G149300 Glycine max HOM05D005884 ORTHO05D007282 2.4e-28 129.8 174 53.4
Solyc09g061440.4 Solanum lycopersicum HOM05D005884 ORTHO05D007282 2.4e-28 129.8 126 60.3
Manes.12G041200 Manihot esculenta HOM05D005884 ORTHO05D007282 4.1e-28 129.0 112 65.2
QL02p021928 Quercus lobata HOM05D005884 ORTHO05D007282 4.1e-28 129.0 202 47.5
Sc05g0002430 Simmondsia chinensis HOM05D005884 ORTHO05D007282 4.1e-28 129.0 159 56.0
Hund18350 Selenicereus undatus HOM05D005884 ORTHO05D007282 7.0e-28 128.3 191 50.3
Sabra02G0183600 Salix brachista HOM05D005884 ORTHO05D007282 9.2e-28 127.9 178 50.6
TWI36G0226 Tripterygium wilfordii HOM05D005884 ORTHO05D007282 9.2e-28 127.9 173 54.3
Lalb_Chr07g0194041 Lupinus albus HOM05D005884 ORTHO05D007282 1.2e-27 127.5 169 55.6
PGSC0003DMG400028009 Solanum tuberosum HOM05D005884 ORTHO05D007282 1.2e-27 127.5 152 55.3
Lj2A1133T33 Lonicera japonica HOM05D005884 ORTHO05D007282 1.6e-27 127.1 124 64.5
DCAR_018555 Daucus carota HOM05D005884 ORTHO05D007282 2.0e-27 126.7 113 63.7
Psat7g243200 Pisum sativum HOM05D005884 ORTHO05D007282 5.9e-27 125.2 209 48.8
Aqoxy2G03761 Aquilegia oxysepala HOM05D005884 ORTHO05D007282 7.8e-27 124.8 142 57.0
MSTRG.18383 Avicennia marina HOM05D005884 ORTHO05D007282 7.8e-27 124.8 105 68.6
Cpa.g.sc8.170 Carica papaya HOM05D005884 ORTHO05D007282 7.8e-27 124.8 166 51.2
TAR633G1722 Trochodendron aralioides HOM05D005884 ORTHO05D007282 7.8e-27 124.8 128 60.2
AUR62008873 Chenopodium quinoa HOM05D005884 ORTHO05D007282 3.8e-26 122.5 105 70.5
Medtr4g017880 Medicago truncatula HOM05D005884 ORTHO05D007282 8.6e-26 121.3 186 50.0
Prupe.8G204400 Prunus persica HOM05D005884 ORTHO05D007282 1.1e-25 120.9 99 70.7
arahy.Tifrunner.gnm1.ann1.C60K2U Arachis hypogaea HOM05D005884 ORTHO05D007282 1.9e-25 120.2 188 50.5
AUR62031836 Chenopodium quinoa HOM05D005884 ORTHO05D007282 1.9e-25 120.2 121 62.8
FvH4_2g19250 Fragaria vesca HOM05D005884 ORTHO05D007282 2.5e-25 119.8 128 60.9
FAN24G3425 Fragaria x ananassa HOM05D005884 ORTHO05D007282 2.5e-25 119.8 128 60.9
RcHm_v2.0_Chr6g0285061 Rosa chinensis HOM05D005884 ORTHO05D007282 4.3e-25 119.0 85 74.1
BcaB03g16138 Brassica carinata HOM05D005884 ORTHO05D007282 7.3e-25 118.2 116 62.1
Migut.D00525 Erythranthe guttata HOM05D005884 ORTHO05D007282 7.3e-25 118.2 122 58.2
FAN27G0062 Fragaria x ananassa HOM05D005884 ORTHO05D007282 9.5e-25 117.9 156 52.6
FAN15G1921 Fragaria x ananassa HOM05D005884 ORTHO05D007282 1.2e-24 117.5 165 50.9
PSO017G2163 Papaver somniferum HOM05D005884 ORTHO05D007282 1.2e-24 117.5 122 61.5
FAN15G1595 Fragaria x ananassa HOM05D005884 ORTHO05D007282 2.1e-24 116.7 165 50.3
EL10Ac7g17785 Beta vulgaris HOM05D005884 ORTHO05D007282 4.7e-24 115.5 185 47.0
PSO063G4085 Papaver somniferum HOM05D005884 ORTHO05D007282 8.0e-24 114.8 201 45.3
Migut.N02263 Erythranthe guttata HOM05D005884 ORTHO05D007282 1.8e-23 113.6 91 68.1
HPP92_022492 Vanilla planifolia HOM05D005884 ORTHO05D007282 2.3e-23 113.2 113 58.4
Ah.08g213990 Amaranthus hybridus HOM05D005884 ORTHO05D007282 3.0e-23 112.8 133 58.6
CANSAT01G0442 Cannabis sativa HOM05D005884 ORTHO05D007282 8.9e-23 111.3 200 45.5
Sp7g10660 Schrenkiella parvula HOM05D005884 ORTHO05D007282 8.9e-23 111.3 203 45.3
Gorai.009G365800 Gossypium raimondii HOM05D005884 ORTHO05D007282 1.2e-22 110.9 128 56.2
A04p08870 Brassica napus HOM05D005884 ORTHO05D007282 2.6e-22 109.8 152 52.0
BraA04t16580Z Brassica rapa HOM05D005884 ORTHO05D007282 2.6e-22 109.8 95 67.4
BcaC02g09439 Brassica carinata HOM05D005884 ORTHO05D007282 4.4e-22 109.0 95 67.4
BolC4t25837H Brassica oleracea HOM05D005884 ORTHO05D007282 4.4e-22 109.0 95 67.4
Carub.0007s2947 Capsella rubella HOM05D005884 ORTHO05D007282 5.8e-22 108.6 164 45.7
CsaV3_7G025830 Cucumis sativus L. HOM05D005884 ORTHO05D007282 7.5e-22 108.2 162 48.8
Cfa002560 Carpinus fangiana HOM05D005884 ORTHO05D007282 1.3e-21 107.5 131 53.4
Haze_24787 Corylus avellana HOM05D005884 ORTHO05D007282 1.7e-21 107.1 131 53.4
ATR0736G055 Amborella trichopoda HOM05D005884 ORTHO05D007282 2.2e-21 106.7 123 55.3
SalBow4G1286 Salvia bowleyana HOM05D005884 ORTHO05D007282 2.2e-21 106.7 188 47.9
Thhalv10026263m.g Eutrema salsugineum HOM05D005884 ORTHO05D007282 2.9e-21 106.3 137 52.6
MBI07_g23671_MAGBIO Magnolia biondii HOM05D005884 ORTHO05D007282 4.9e-21 105.5 177 42.9
Sed0001531 Sechium edule HOM05D005884 ORTHO05D007282 4.9e-21 105.5 174 45.4
CDE02G3372 Ceratophyllum demersum HOM05D005884 ORTHO05D007282 1.1e-20 104.4 137 51.1
MELO3C012764.2 Cucumis melo HOM05D005884 ORTHO05D007282 1.4e-20 104.0 196 43.4
ClCG09G009110 Citrullus lanatus HOM05D005884 ORTHO05D007282 2.4e-20 103.2 162 45.7
SEGI_25444 Sequoiadendron giganteum HOM05D005884 ORTHO05D007282 2.4e-20 103.2 109 56.0
Os04g0513000 Oryza sativa ssp. japonica HOM05D005884 ORTHO05D007282 5.4e-20 102.1 76 71.1
Zm00001eb426500 Zea mays HOM05D005884 ORTHO05D007282 7.0e-20 101.7 126 54.0
SGA_v2.0_scaffold8G04650 Striga asiatica HOM05D005884 ORTHO05D007282 9.2e-20 101.3 163 46.6
Gohir.A09G200610 Gossypium hirsutum HOM05D005884 ORTHO05D007282 2.0e-19 100.1 117 54.7
TPR.G8219 Trifolium pratense HOM05D005884 ORTHO05D007282 3.5e-19 99.4 199 43.7
MD10G1165900 Malus domestica HOM05D005884 ORTHO05D007282 4.6e-19 99.0 132 51.5
C04p42740 Brassica napus HOM05D005884 ORTHO05D007282 1.0e-18 97.8 95 62.1
MSTRG.17548 Avicennia marina HOM05D005884 ORTHO05D007282 5.0e-18 95.5 126 54.0
unitig_22.g6325 Utricularia gibba HOM05D005884 ORTHO05D007282 6.6e-18 95.1 127 49.6
VMungo0331G1358 Vigna mungo HOM05D005884 ORTHO05D007282 2.5e-17 93.2 117 52.1
TAR194G0001 Trochodendron aralioides HOM05D005884 ORTHO05D004773 4.3e-17 92.4 92 64.1
MBI10_g44186_MAGBIO Magnolia biondii HOM05D005884 ORTHO05D007282 9.5e-17 91.3 118 50.8
THA.LOC104804605 Tarenaya hassleriana HOM05D005884 ORTHO05D007282 6.2e-16 88.6 116 51.7
AT4G13200 Arabidopsis thaliana HOM05D005884 ORTHO05D007282 8.0e-16 88.2 120 50.8
CARHR218670 Cardamine hirsuta HOM05D005884 ORTHO05D007282 1.8e-15 87.0 116 49.1
Mapoly0028s0026 Marchantia polymorpha HOM05D005884 ORTHO05D007282 6.8e-15 85.1 102 52.9
MBI06_g14323_MAGBIO Magnolia biondii HOM05D005884 ORTHO05D007282 3.4e-14 82.8 83 57.8
AL9U10790 Arabidopsis lyrata HOM05D005884 ORTHO05D007282 1.7e-13 80.5 149 40.9
Aa31LG9G4610 Aethionema arabicum HOM05D005884 ORTHO05D007282 4.9e-13 79.0 167 39.5
THA.LOC104808781 Tarenaya hassleriana HOM05D005884 ORTHO05D007282 1.1e-12 77.8 139 46.8
Atru.chr3.3178 Acer truncatum HOM05D005884 ORTHO05D007282 1.2e-11 74.3 155 38.7
AagrBONN_evm.TU.Sc2ySwM_228.3174 Anthoceros agrestis HOM05D005884 ORTHO05D007282 1.2e-11 74.3 105 49.5
SalBow2G0198 Salvia bowleyana HOM05D005884 ORTHO05D007282 1.2e-11 74.3 120 43.3
Sed0008993 Sechium edule HOM05D005884 ORTHO05D007282 1.0e-10 71.2 116 45.7
MCO02G464 Micromonas commoda HOM05D005884 ORTHO05D007282 3.9e-10 69.3 114 43.9
Gohir.A03G143925 Gossypium hirsutum HOM05D005884 ORTHO05D007282 6.6e-10 68.6 99 50.5
Gorai.001G128300 Gossypium raimondii HOM05D005884 ORTHO05D007282 6.6e-10 68.6 99 50.5
Gorai.001G116800 Gossypium raimondii HOM05D005884 ORTHO05D007282 8.6e-10 68.2 97 51.5
Gorai.002G226800 Gossypium raimondii HOM05D005884 ORTHO05D007282 8.6e-10 68.2 97 51.5
Pp3c5_25810 Physcomitrium patens HOM05D005884 ORTHO05D007282 3.3e-09 66.2 117 39.3


User provided reference genes

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