Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.H00781 Eucalyptus grandis HOM05D007399 ORTHO05D009341 8.6e-114 413.7 212 100.0
Manes.13G046300 Manihot esculenta HOM05D007399 ORTHO05D009341 2.1e-43 179.9 219 49.3
QL09p052198 Quercus lobata HOM05D007399 ORTHO05D009341 5.7e-41 171.8 220 48.2
Thecc.01G222700 Theobroma cacao HOM05D007399 ORTHO05D009341 4.8e-40 168.7 226 47.8
Haze_24850 Corylus avellana HOM05D007399 ORTHO05D009341 9.1e-39 164.5 183 51.9
Gohir.D11G145400 Gossypium hirsutum HOM05D007399 ORTHO05D009341 1.7e-37 160.2 223 44.8
Gohir.A11G139200 Gossypium hirsutum HOM05D007399 ORTHO05D009341 2.2e-37 159.8 223 44.4
PGR083G1511 Punica granatum HOM05D007399 ORTHO05D009341 8.5e-37 157.9 213 45.5
Gorai.007G155900 Gossypium raimondii HOM05D007399 ORTHO05D009341 1.1e-36 157.5 230 43.5
MD05G1173200 Malus domestica HOM05D007399 ORTHO05D009341 4.2e-36 155.6 221 44.3
RcHm_v2.0_Chr6g0284361 Rosa chinensis HOM05D007399 ORTHO05D009341 4.2e-36 155.6 224 45.1
FAN27G2185 Fragaria x ananassa HOM05D007399 ORTHO05D009341 5.5e-36 155.2 223 45.7
Dinv19187 Davidia involucrata HOM05D007399 ORTHO05D009341 7.2e-36 154.8 229 43.7
ECA248G2789 Erigeron canadensis HOM05D007399 ORTHO05D009341 7.2e-36 154.8 214 43.9
Prupe.8G200700 Prunus persica HOM05D007399 ORTHO05D009341 7.2e-36 154.8 221 43.0
FvH4_2g18740 Fragaria vesca HOM05D007399 ORTHO05D009341 9.4e-36 154.5 223 44.8
FAN15G3119 Fragaria x ananassa HOM05D007399 ORTHO05D009341 1.6e-35 153.7 222 45.9
Phvul.010G020400 Phaseolus vulgaris HOM05D007399 ORTHO05D009341 8.0e-35 151.4 222 41.4
Glyma.16G101000 Glycine max HOM05D007399 ORTHO05D009341 1.4e-34 150.6 212 42.0
COL.COLO4_15647 Corchorus olitorius HOM05D007399 ORTHO05D009341 5.2e-34 148.7 219 47.0
Ciclev10022115m.g Citrus clementina HOM05D007399 ORTHO05D009341 6.7e-34 148.3 219 42.9
Oeu037382.1 Olea europaea HOM05D007399 ORTHO05D009341 6.7e-34 148.3 186 46.8
AUR62001112 Chenopodium quinoa HOM05D007399 ORTHO05D009341 1.5e-33 147.1 203 46.3
HanXRQChr01g0015211 Helianthus annuus HOM05D007399 ORTHO05D009341 2.6e-33 146.4 209 44.0
Duzib133G1013 Durio zibethinus HOM05D007399 ORTHO05D009341 3.3e-33 146.0 183 49.2
Cc01_g16850 Coffea canephora HOM05D007399 ORTHO05D009341 4.4e-33 145.6 219 42.9
Lsat_1_v5_gn_5_180581 Lactuca sativa HOM05D007399 ORTHO05D009341 4.4e-33 145.6 222 40.5
GSVIVG01003279001 Vitis vinifera HOM05D007399 ORTHO05D009341 1.3e-32 144.1 235 40.0
Medtr8g013040 Medicago truncatula HOM05D007399 ORTHO05D009341 1.7e-32 143.7 214 42.5
Nitab4.5_0000045g0320 Nicotiana tabacum HOM05D007399 ORTHO05D009341 2.2e-32 143.3 218 43.6
Sabra02G0185900 Salix brachista HOM05D007399 ORTHO05D009341 2.2e-32 143.3 205 45.4
Nitab4.5_0000345g0070 Nicotiana tabacum HOM05D007399 ORTHO05D009341 3.7e-32 142.5 222 44.1
Potri.002G244400 Populus trichocarpa HOM05D007399 ORTHO05D009341 3.7e-32 142.5 190 47.4
Hund05568 Selenicereus undatus HOM05D007399 ORTHO05D009341 6.3e-32 141.7 225 40.0
Peaxi162Scf00398g00810 Petunia axillaris HOM05D007399 ORTHO05D009341 8.2e-32 141.4 223 43.5
Actinidia09475 Actinidia chinensis HOM05D007399 ORTHO05D009341 1.1e-31 141.0 195 43.6
ClCG09G008880 Citrullus lanatus HOM05D007399 ORTHO05D009341 1.4e-31 140.6 190 46.8
Ah.08g214480 Amaranthus hybridus HOM05D007399 ORTHO05D009341 1.8e-31 140.2 217 41.0
FAN24G1833 Fragaria x ananassa HOM05D007399 ORTHO05D009341 2.4e-31 139.8 218 43.1
VMungo0331G1622 Vigna mungo HOM05D007399 ORTHO05D009341 5.3e-31 138.7 213 40.4
QL09p053453 Quercus lobata HOM05D007399 ORTHO05D009341 7.0e-31 138.3 187 47.6
Rhsim01G0254900 Rhododendron simsii HOM05D007399 ORTHO05D009341 1.2e-30 137.5 101 67.3
BraA05t22833Z Brassica rapa HOM05D007399 ORTHO05D009341 2.0e-30 136.7 214 41.6
Nn1g07919 Nelumbo nucifera HOM05D007399 ORTHO05D009341 2.7e-30 136.3 105 63.8
AUR62008936 Chenopodium quinoa HOM05D007399 ORTHO05D009341 3.5e-30 136.0 189 47.6
BcaC05g29751 Brassica carinata HOM05D007399 ORTHO05D009341 7.7e-30 134.8 212 40.6
Cpa.g.sc8.134 Carica papaya HOM05D007399 ORTHO05D009341 7.7e-30 134.8 137 56.2
A05p41060 Brassica napus HOM05D007399 ORTHO05D009341 2.9e-29 132.9 214 41.1
C05p60230 Brassica napus HOM05D007399 ORTHO05D009341 3.8e-29 132.5 214 41.1
BolC5t34673H Brassica oleracea HOM05D007399 ORTHO05D009341 3.8e-29 132.5 214 40.7
Oeu037384.1 Olea europaea HOM05D007399 ORTHO05D009341 3.8e-29 132.5 104 64.4
Lj2A1128G40 Lonicera japonica HOM05D007399 ORTHO05D009341 5.0e-29 132.1 200 41.0
BcaC05g29843 Brassica carinata HOM05D007399 ORTHO05D009341 6.5e-29 131.7 214 40.7
Psat4g199960 Pisum sativum HOM05D007399 ORTHO05D009341 6.5e-29 131.7 216 40.3
Cfa002599 Carpinus fangiana HOM05D007399 ORTHO05D009341 8.5e-29 131.3 212 41.0
Lj3g0000647 Lotus japonicus HOM05D007399 ORTHO05D009341 8.5e-29 131.3 212 39.6
TPR.G17137 Trifolium pratense HOM05D007399 ORTHO05D009341 1.5e-28 130.6 217 40.1
MELO3C021053.2 Cucumis melo HOM05D007399 ORTHO05D009341 3.2e-28 129.4 217 40.6
CiPaw.03G147600 Carya illinoinensis HOM05D007399 ORTHO05D009341 5.5e-28 128.6 187 41.7
TWI18G0746 Tripterygium wilfordii HOM05D007399 ORTHO05D009341 7.2e-28 128.3 223 40.4
QL09p053062 Quercus lobata HOM05D007399 ORTHO05D009341 1.2e-27 127.5 145 51.7
Lalb_Chr12g0209951 Lupinus albus HOM05D007399 ORTHO05D009341 1.6e-27 127.1 205 40.0
Aa31LG5G17710 Aethionema arabicum HOM05D007399 ORTHO05D009341 4.7e-27 125.6 223 37.2
arahy.Tifrunner.gnm1.ann1.5JJB2W Arachis hypogaea HOM05D007399 ORTHO05D009341 4.7e-27 125.6 191 41.4
Migut.D02494 Erythranthe guttata HOM05D007399 ORTHO05D009341 4.7e-27 125.6 216 39.8
THA.LOC104802666 Tarenaya hassleriana HOM05D007399 ORTHO05D009341 8.0e-27 124.8 228 39.9
AL3G18400 Arabidopsis lyrata HOM05D007399 ORTHO05D009341 3.0e-26 122.9 207 38.2
CsaV3_7G026010 Cucumis sativus L. HOM05D007399 ORTHO05D009341 4.0e-26 122.5 217 39.6
EL10Ac7g17870 Beta vulgaris HOM05D007399 ORTHO05D009341 6.8e-26 121.7 97 58.8
SalBow6G3187 Salvia bowleyana HOM05D007399 ORTHO05D009341 6.8e-26 121.7 207 36.7
SalBow6G3685 Salvia bowleyana HOM05D007399 ORTHO05D009341 6.8e-26 121.7 207 36.7
Atru.chr6.1505 Acer truncatum HOM05D007399 ORTHO05D009341 8.8e-26 121.3 100 61.0
TAR362G0473 Trochodendron aralioides HOM05D007399 ORTHO05D009341 8.8e-26 121.3 221 38.0
AT3G07150 Arabidopsis thaliana HOM05D007399 ORTHO05D009341 1.5e-25 120.6 208 39.4
Sed0009642 Sechium edule HOM05D007399 ORTHO05D009341 9.8e-25 117.9 227 35.7
CAN.G3.2 Capsicum annuum HOM05D007399 ORTHO05D009341 1.3e-24 117.5 215 40.0
PSO170G3887 Papaver somniferum HOM05D007399 ORTHO05D009341 2.2e-24 116.7 194 38.7
arahy.Tifrunner.gnm1.ann1.YE6SLX Arachis hypogaea HOM05D007399 ORTHO05D009341 2.8e-24 116.3 228 37.3
PGSC0003DMG401023104 Solanum tuberosum HOM05D007399 ORTHO05D009341 6.3e-24 115.2 214 39.3
Thhalv10022223m.g Eutrema salsugineum HOM05D007399 ORTHO05D009341 8.3e-24 114.8 178 41.0
Sopen09g023130 Solanum pennellii HOM05D007399 ORTHO05D009341 1.1e-23 114.4 218 39.0
Solyc09g059950.3 Solanum lycopersicum HOM05D007399 ORTHO05D009341 1.4e-23 114.0 225 39.1
PSO357G0666 Papaver somniferum HOM05D007399 ORTHO05D009341 2.4e-23 113.2 197 37.1
Sc24g0003500 Simmondsia chinensis HOM05D007399 ORTHO05D009341 7.0e-23 111.7 104 58.7
CSS0020487 Camellia sinensis var. sinensis HOM05D007399 ORTHO05D009341 9.1e-23 111.3 97 59.8
CARHR081750 Cardamine hirsuta HOM05D007399 ORTHO05D009341 1.6e-22 110.5 179 40.2
Sp3g06090 Schrenkiella parvula HOM05D007399 ORTHO05D009341 2.0e-22 110.2 206 38.8
CANSAT01G1231 Cannabis sativa HOM05D007399 ORTHO05D009341 4.5e-22 109.0 104 52.9
CANSAT01G2134 Cannabis sativa HOM05D007399 ORTHO05D009341 5.9e-22 108.6 99 53.5
CDE06G2632 Ceratophyllum demersum HOM05D007399 ORTHO05D009341 7.7e-22 108.2 89 62.9
Carub.0003s0667 Capsella rubella HOM05D007399 ORTHO05D009341 1.0e-21 107.8 144 45.1
CANSAT01G0413 Cannabis sativa HOM05D007399 ORTHO05D009341 2.2e-21 106.7 143 42.7
DCAR_000523 Daucus carota HOM05D007399 ORTHO05D009341 3.8e-21 105.9 182 37.4
Actinidia23717 Actinidia chinensis HOM05D007399 ORTHO05D009341 9.4e-20 101.3 223 34.1
CANSAT01G2481 Cannabis sativa HOM05D007399 ORTHO05D009341 2.1e-19 100.1 108 50.0
SHI28622 Sapria himalayana HOM05D000002 ORTHO05D000001 4.7e-19 99.0 97 47.4
SEGI_10803 Sequoiadendron giganteum HOM05D007399 ORTHO05D009341 3.7e-16 89.4 92 45.7
Hund20426 Selenicereus undatus HOM05D007399 ORTHO05D009341 4.1e-15 85.9 79 53.2
Os01g0918400 Oryza sativa ssp. japonica HOM05D007399 ORTHO05D009341 2.7e-14 83.2 89 49.4
HPP92_011779 Vanilla planifolia HOM05D007399 ORTHO05D009341 6.6e-13 78.6 201 34.8
Zm00001eb364650 Zea mays HOM05D007399 ORTHO05D009341 6.6e-13 78.6 90 46.7
ATR0609G108 Amborella trichopoda HOM05D007399 ORTHO05D009341 8.6e-13 78.2 107 45.8
Aqoxy5G00011 Aquilegia oxysepala HOM05D007399 ORTHO05D009341 2.9e-08 63.2 183 31.1


User provided reference genes

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