Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.H00730 Eucalyptus grandis HOM05D004954 ORTHO05D006267 0.0e+00 1196.8 617 100.0
PGR044G2625 Punica granatum HOM05D004954 ORTHO05D006267 0.0e+00 1082.8 614 88.4
Duzib211G0600 Durio zibethinus HOM05D004954 ORTHO05D006267 3.2e-310 1067.8 618 88.3
Thecc.01G211600 Theobroma cacao HOM05D004954 ORTHO05D006267 3.5e-309 1064.3 618 88.2
CSS0025127 Camellia sinensis var. sinensis HOM05D004954 ORTHO05D006267 3.3e-307 1057.7 618 87.2
CiPaw.13G054900 Carya illinoinensis HOM05D004954 ORTHO05D006267 7.4e-307 1056.6 618 87.7
QL09p046153 Quercus lobata HOM05D004954 ORTHO05D006267 4.8e-306 1053.9 617 87.8
Gohir.D07G166900 Gossypium hirsutum HOM05D004954 ORTHO05D006267 3.1e-305 1051.2 618 86.9
Gorai.N003600 Gossypium raimondii HOM05D004954 ORTHO05D006267 5.3e-305 1050.4 618 86.9
MD10G1152500 Malus domestica HOM05D004954 ORTHO05D006267 6.9e-305 1050.0 617 86.1
CANSAT01G1324 Cannabis sativa HOM05D004954 ORTHO05D006267 2.6e-304 1048.1 618 86.1
Dinv10429 Davidia involucrata HOM05D004954 ORTHO05D006267 4.5e-304 1047.3 617 86.4
Prupe.8G191000 Prunus persica HOM05D004954 ORTHO05D006267 4.5e-304 1047.3 618 86.4
Actinidia34548 Actinidia chinensis HOM05D004954 ORTHO05D006267 7.1e-302 1040.0 617 84.9
Gohir.A07G159500 Gossypium hirsutum HOM05D004954 ORTHO05D006267 9.3e-302 1039.6 618 86.1
Rhsim13G0052400 Rhododendron simsii HOM05D004954 ORTHO05D006267 1.2e-301 1039.3 641 83.3
MELO3C012723.2 Cucumis melo HOM05D004954 ORTHO05D006267 1.8e-300 1035.4 617 84.6
TWI18G0293 Tripterygium wilfordii HOM05D004954 ORTHO05D006267 1.8e-300 1035.4 618 85.1
CsaV3_7G026900 Cucumis sativus L. HOM05D004954 ORTHO05D006267 2.3e-300 1035.0 614 84.7
RcHm_v2.0_Chr6g0282881 Rosa chinensis HOM05D004954 ORTHO05D006267 3.9e-300 1034.2 617 84.8
Lj1C100T5 Lonicera japonica HOM05D004954 ORTHO05D006267 8.7e-300 1033.1 616 86.0
Sed0007567 Sechium edule HOM05D004954 ORTHO05D006267 8.7e-300 1033.1 617 84.6
Atru.chr5.2285 Acer truncatum HOM05D004954 ORTHO05D006267 1.9e-299 1031.9 618 85.3
Ciclev10004559m.g Citrus clementina HOM05D004954 ORTHO05D006267 2.5e-299 1031.6 618 85.3
FAN24G2804 Fragaria x ananassa HOM05D004954 ORTHO05D006267 2.5e-299 1031.6 624 84.0
Cc01_g16190 Coffea canephora HOM05D004954 ORTHO05D006267 3.1e-297 1024.6 616 84.6
Dinv28815 Davidia involucrata HOM05D004954 ORTHO05D006267 4.0e-297 1024.2 618 84.5
ECA248G3210 Erigeron canadensis HOM05D004954 ORTHO05D006267 4.0e-297 1024.2 618 84.8
FAN27G0710 Fragaria x ananassa HOM05D004954 ORTHO05D006267 5.3e-297 1023.8 628 83.3
Potri.014G191100 Populus trichocarpa HOM05D004954 ORTHO05D006267 1.5e-296 1022.3 617 84.4
ClCG09G008140 Citrullus lanatus HOM05D004954 ORTHO05D006267 1.4e-294 1015.8 617 83.6
Actinidia23789 Actinidia chinensis HOM05D004954 ORTHO05D006267 2.5e-294 1015.0 656 80.6
HanXRQChr01g0007231 Helianthus annuus HOM05D004954 ORTHO05D006267 2.5e-294 1015.0 618 83.3
THA.LOC104818994 Tarenaya hassleriana HOM05D004954 ORTHO05D006267 7.9e-293 1010.0 617 82.3
SalBow6G4493 Salvia bowleyana HOM05D004954 ORTHO05D006267 1.0e-292 1009.6 617 82.7
CSS0003762 Camellia sinensis var. sinensis HOM05D004954 ORTHO05D006267 1.1e-291 1006.1 619 84.2
Lalb_Chr19g0124251 Lupinus albus HOM05D004954 ORTHO05D006267 3.7e-290 1001.1 617 82.7
MSTRG.21308 Avicennia marina HOM05D004954 ORTHO05D006267 4.8e-290 1000.7 618 82.2
Haze_25215 Corylus avellana HOM05D004954 ORTHO05D006267 1.5e-288 995.7 684 76.9
DCAR_012691 Daucus carota HOM05D004954 ORTHO05D006267 2.0e-288 995.3 621 82.1
Oeu003633.1 Olea europaea HOM05D004954 ORTHO05D006267 4.2e-286 987.6 617 81.0
vmacro21304 Vaccinium macrocarpon HOM05D004954 ORTHO05D006267 9.4e-286 986.5 753 70.9
A06p39130 Brassica napus HOM05D004954 ORTHO05D006267 2.7e-285 984.9 616 80.7
C07p39210 Brassica napus HOM05D004954 ORTHO05D006267 1.0e-284 983.0 616 80.4
BolC7t44441H Brassica oleracea HOM05D004954 ORTHO05D006267 2.3e-284 981.9 616 80.5
TPR.G29775 Trifolium pratense HOM05D004954 ORTHO05D006267 3.0e-284 981.5 623 81.1
Thhalv10003836m.g Eutrema salsugineum HOM05D004954 ORTHO05D006267 3.9e-284 981.1 616 80.7
arahy.Tifrunner.gnm1.ann1.4YG7MF Arachis hypogaea HOM05D004954 ORTHO05D006267 2.0e-283 978.8 618 80.7
arahy.Tifrunner.gnm1.ann1.E22JQ7 Arachis hypogaea HOM05D004954 ORTHO05D006267 2.0e-283 978.8 618 80.7
Glyma.17G145700 Glycine max HOM05D004954 ORTHO05D006267 2.0e-283 978.8 619 80.8
AT5G48520 Arabidopsis thaliana HOM05D004954 ORTHO05D006267 4.3e-283 977.6 616 80.2
VMungo0251G2039 Vigna mungo HOM05D004954 ORTHO05D006267 4.3e-283 977.6 618 80.9
Phvul.003G003500 Phaseolus vulgaris HOM05D004954 ORTHO05D006267 1.3e-282 976.1 618 80.7
Ah.11g051040 Amaranthus hybridus HOM05D004954 ORTHO05D006267 2.8e-282 974.9 644 77.3
Nn8g39913 Nelumbo nucifera HOM05D004954 ORTHO05D006267 1.8e-281 972.2 616 80.5
Carub.0008s0810 Capsella rubella HOM05D004954 ORTHO05D006267 3.1e-281 971.5 616 79.9
EL10Ac5g10627 Beta vulgaris HOM05D004954 ORTHO05D006267 5.3e-281 970.7 609 80.1
Lj2g0006494 Lotus japonicus HOM05D004954 ORTHO05D006267 5.3e-281 970.7 617 80.7
Sp2g18880 Schrenkiella parvula HOM05D004954 ORTHO05D006267 6.9e-281 970.3 616 79.7
PSO170G3087 Papaver somniferum HOM05D004954 ORTHO05D006267 2.0e-280 968.8 613 79.3
PSO063G7187 Papaver somniferum HOM05D004954 ORTHO05D006267 5.9e-280 967.2 613 79.0
BraA06t26827Z Brassica rapa HOM05D004954 ORTHO05D006267 2.9e-279 964.9 649 76.6
Medtr1g038570 Medicago truncatula HOM05D004954 ORTHO05D006267 5.0e-279 964.1 622 79.7
Hund09467 Selenicereus undatus HOM05D004954 ORTHO05D006267 6.1e-277 957.2 610 79.5
CAN.G874.27 Capsicum annuum HOM05D004954 ORTHO05D006267 2.0e-275 952.2 617 78.3
BcaC06g30786 Brassica carinata HOM05D004954 ORTHO05D006267 3.7e-274 948.0 616 78.2
DCAR_018627 Daucus carota HOM05D004954 ORTHO05D006267 4.5e-272 941.0 618 77.8
Aqoxy7G02924 Aquilegia oxysepala HOM05D004954 ORTHO05D006267 7.7e-272 940.3 614 78.2
Sopen06g034480 Solanum pennellii HOM05D004954 ORTHO05D006267 1.0e-271 939.9 614 77.5
unitig_37.g12142 Utricularia gibba HOM05D004954 ORTHO05D006267 1.0e-271 939.9 617 77.1
Migut.D00727 Erythranthe guttata HOM05D004954 ORTHO05D006267 2.2e-271 938.7 614 78.3
MBI18_g30537_MAGBIO Magnolia biondii HOM05D004954 ORTHO05D006267 2.2e-271 938.7 629 76.2
Solyc06g083090.4 Solanum lycopersicum HOM05D004954 ORTHO05D006267 3.8e-271 937.9 614 77.2
Manes.13G054100 Manihot esculenta HOM05D004954 ORTHO05D006267 7.2e-270 933.7 541 86.5
SGA_v2.0_scaffold29G12103 Striga asiatica HOM05D004954 ORTHO05D006267 4.7e-269 931.0 574 81.5
ATR0824G007 Amborella trichopoda HOM05D004954 ORTHO05D006267 1.8e-265 919.1 616 75.0
Nitab4.5_0011983g0020 Nicotiana tabacum HOM05D004954 ORTHO05D006267 2.2e-263 912.1 614 76.2
Peaxi162Scf01242g00120 Petunia axillaris HOM05D004954 ORTHO05D006267 3.8e-263 911.4 617 76.2
AUR62008123 Chenopodium quinoa HOM05D004954 ORTHO05D006267 1.2e-261 906.4 633 75.5
Nitab4.5_0002463g0060 Nicotiana tabacum HOM05D004954 ORTHO05D006267 1.2e-261 906.4 616 75.8
Aa31sc420G20 Aethionema arabicum HOM05D004954 ORTHO05D006267 1.5e-259 899.4 574 79.3
AUR62028702 Chenopodium quinoa HOM05D004954 ORTHO05D006267 1.5e-259 899.4 617 76.3
Sopen06g034490 Solanum pennellii HOM05D004954 ORTHO05D006267 6.3e-258 894.0 599 75.6
Solyc06g083100.2 Solanum lycopersicum HOM05D004954 ORTHO05D006267 3.5e-256 888.3 601 75.2
HPP92_017515 Vanilla planifolia HOM05D004954 ORTHO05D006267 8.5e-255 883.6 615 72.8
Cfa002884 Carpinus fangiana HOM05D004954 ORTHO05D006267 2.7e-253 878.6 516 85.3
TAR375G0531 Trochodendron aralioides HOM05D004954 ORTHO05D006267 8.0e-253 877.1 639 71.7
FvH4_2g17860 Fragaria vesca HOM05D004954 ORTHO05D006267 1.5e-251 872.8 516 84.3
Ca_12404_v3 Cicer arietinum L. HOM05D004954 ORTHO05D006267 1.6e-248 862.8 623 73.5
Psat6g025280 Pisum sativum HOM05D004954 ORTHO05D006267 4.5e-248 861.3 575 78.3
CDE04G1241 Ceratophyllum demersum HOM05D004954 ORTHO05D006267 5.2e-244 847.8 616 71.1
Os06g0186500 Oryza sativa ssp. japonica HOM05D004954 ORTHO05D006267 4.4e-243 844.7 616 70.0
Sabra14G0144200 Salix brachista HOM05D004954 ORTHO05D006267 7.0e-241 837.4 513 84.0
Lsat_1_v5_gn_5_178381 Lactuca sativa HOM05D004954 ORTHO05D006267 8.6e-223 777.3 566 73.3
Pp3c20_5680 Physcomitrium patens HOM05D004954 ORTHO05D006267 1.5e-219 766.5 615 61.1
Atru.chr12.963 Acer truncatum HOM05D004954 ORTHO05D006267 1.7e-218 763.1 446 86.3
Sc17g0001680 Simmondsia chinensis HOM05D004954 ORTHO05D006267 2.7e-216 755.7 468 80.6
FAN15G2379 Fragaria x ananassa HOM05D004954 ORTHO05D006267 6.6e-215 751.1 557 71.3
SMO367G0402 Selaginella moellendorffii HOM05D004954 ORTHO05D006267 1.4e-212 743.4 619 60.3
Mapoly0098s0023 Marchantia polymorpha HOM05D004954 ORTHO05D006267 5.3e-204 714.9 614 59.6
AagrBONN_evm.TU.Sc2ySwM_344.252 Anthoceros agrestis HOM05D004954 ORTHO05D006267 2.4e-188 662.9 649 52.7
Cpa.g.sc8.76 Carica papaya HOM05D004954 ORTHO05D006267 8.7e-175 617.8 361 88.1
Os07g0185700 Oryza sativa ssp. japonica HOM05D004954 ORTHO05D006267 2.0e-166 590.1 616 51.0
COL.COLO4_03294 Corchorus olitorius HOM05D004954 ORTHO05D006267 4.8e-165 585.5 342 88.9
GSVIVG01006234001 Vitis vinifera HOM05D004954 ORTHO05D006267 1.2e-163 580.9 494 66.0
CARHR183510 Cardamine hirsuta HOM05D004954 ORTHO05D006267 6.5e-162 575.1 360 82.2
Zm00001eb301770 Zea mays HOM05D004954 ORTHO05D006267 1.7e-157 560.5 616 48.1
arahy.Tifrunner.gnm1.ann1.R4R8P3 Arachis hypogaea HOM05D004954 ORTHO05D006267 1.3e-149 534.3 393 73.3
Zm00001eb278340 Zea mays HOM05D004954 ORTHO05D006267 1.4e-143 514.2 364 72.0
CBR_g32699 Chara braunii HOM05D004954 ORTHO05D006267 1.3e-125 454.5 511 46.2
SMO302G0009 Selaginella moellendorffii HOM05D004954 ORTHO05D006267 4.9e-125 452.6 597 45.6
MD05G1162300 Malus domestica HOM05D004954 ORTHO05D006267 1.2e-115 421.4 374 64.7
vmacro21300 Vaccinium macrocarpon HOM05D004954 ORTHO05D006267 1.3e-114 417.9 282 79.1
MD05G1161600 Malus domestica HOM05D004954 ORTHO05D006267 5.8e-102 375.9 457 52.1
GSVIVG01002254001 Vitis vinifera HOM05D004954 ORTHO05D006267 1.2e-78 298.5 175 84.6
COL.COLO4_03295 Corchorus olitorius HOM05D004954 ORTHO05D006267 1.3e-77 295.0 171 86.5
SEGI_36119 Sequoiadendron giganteum HOM05D004954 ORTHO05D006267 9.3e-68 262.3 186 67.2
FAN15G2003 Fragaria x ananassa HOM05D004954 ORTHO05D006267 1.2e-62 245.4 152 84.2
Sc17g0001690 Simmondsia chinensis HOM05D004954 ORTHO05D006267 2.3e-58 231.1 144 83.3
FAN15G2507 Fragaria x ananassa HOM05D004954 ORTHO05D006267 6.7e-58 229.6 134 85.1
Cpa.g.sc8.77 Carica papaya HOM05D004954 ORTHO05D006267 6.5e-53 213.0 117 86.3
Atru.chr12.964 Acer truncatum HOM05D004954 ORTHO05D006267 1.6e-51 208.4 151 70.9
MD05G1161700 Malus domestica HOM05D004954 ORTHO05D006267 3.3e-49 200.7 122 82.8
SEGI_30399 Sequoiadendron giganteum HOM05D004954 ORTHO05D006267 2.0e-46 191.4 135 71.1
Sabra14G0144300 Salix brachista HOM05D004954 ORTHO05D006267 3.2e-44 184.1 106 82.1
MBI18_g37244_MAGBIO Magnolia biondii HOM05D004954 ORTHO05D006267 3.9e-42 177.2 105 77.1
VMungo0647G2582 Vigna mungo HOM05D004954 ORTHO05D006267 2.0e-41 174.9 105 86.7
Ca_12408_v3 Cicer arietinum L. HOM05D004954 ORTHO05D006267 7.0e-39 166.4 178 52.8
MD05G1160200 Malus domestica HOM05D004954 ORTHO05D006267 3.5e-30 137.5 86 81.4
VMungo0647G1109 Vigna mungo HOM05D004954 ORTHO05D006267 6.5e-29 133.3 100 72.0
Ca_12409_v3 Cicer arietinum L. HOM05D004954 ORTHO05D006267 2.1e-27 128.3 74 89.2
CBR_g49514 Chara braunii HOM05D000019 ORTHO05D001702 4.7e-27 127.1 106 55.7
SEGI_32998 Sequoiadendron giganteum HOM05D004954 ORTHO05D006267 1.4e-23 115.5 84 71.4
MD05G1162200 Malus domestica HOM05D004954 ORTHO05D006267 4.1e-23 114.0 58 86.2
QL09p053445 Quercus lobata HOM05D004954 ORTHO05D030058 7.0e-23 113.2 117 63.2
Ciclev10018232m.g Citrus clementina HOM05D004954 ORTHO05D006267 2.2e-21 108.2 76 73.7
PGSC0003DMG400008807 Solanum tuberosum HOM05D004954 ORTHO05D006267 3.2e-20 104.4 59 72.9
PGSC0003DMG400020114 Solanum tuberosum HOM05D004954 ORTHO05D006267 3.2e-20 104.4 59 72.9
VMungo0464G0043 Vigna mungo HOM05D004954 ORTHO05D006267 3.2e-20 104.4 59 76.3
VMungo0720G1677 Vigna mungo HOM05D002055 ORTHO05D002120 7.2e-20 103.2 104 47.1
Cfa002883 Carpinus fangiana HOM05D020463 ORTHO05D022255 2.0e-17 95.1 54 87.0
Glyma.09G284100 Glycine max HOM05D004954 ORTHO05D006267 1.3e-16 92.4 50 84.0
Hma1.2p1_0066F.1_g035760 Hydrangea macrophylla HOM05D004954 ORTHO05D006267 7.7e-14 83.2 55 65.5
TAR375G0464 Trochodendron aralioides HOM05D004954 ORTHO05D006267 1.6e-11 75.5 44 79.5
Medtr3g114845 Medicago truncatula HOM05D004954 ORTHO05D006267 6.1e-11 73.6 44 63.6
CSS0000571 Camellia sinensis var. sinensis HOM05D004954 ORTHO05D014145 1.0e-10 72.8 48 81.2
MD05G1162500 Malus domestica HOM05D004954 ORTHO05D006267 4.0e-10 70.9 80 47.5
SEGI_31941 Sequoiadendron giganteum HOM05D004954 ORTHO05D006267 9.8e-09 66.2 38 76.3
QL09p053081 Quercus lobata HOM05D002786 ORTHO05D030058 3.7e-08 64.3 110 45.5
Hma1.2p1_0717F.1_g208260 Hydrangea macrophylla HOM05D007286 ORTHO05D008955 4.6e-06 57.4 34 79.4


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