Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.H00725 Eucalyptus grandis HOM05D006407 ORTHO05D008079 1.0e-227 793.1 413 100.0
PGR083G0415 Punica granatum HOM05D006407 ORTHO05D008079 1.1e-160 570.5 413 77.5
Cpa.g.sc8.72 Carica papaya HOM05D006407 ORTHO05D008079 2.2e-158 562.8 353 83.0
Thecc.01G211000 Theobroma cacao HOM05D006407 ORTHO05D008079 3.8e-158 562.0 349 85.4
Dinv28811 Davidia involucrata HOM05D006407 ORTHO05D008079 1.1e-157 560.5 352 82.4
Gorai.N003300 Gossypium raimondii HOM05D006407 ORTHO05D008079 1.6e-156 556.6 346 84.4
CiPaw.14G043600 Carya illinoinensis HOM05D006407 ORTHO05D008079 3.0e-155 552.4 413 74.3
Ciclev10015489m.g Citrus clementina HOM05D006407 ORTHO05D008079 8.8e-155 550.8 381 76.6
QL09p046404 Quercus lobata HOM05D006407 ORTHO05D008079 8.8e-155 550.8 403 74.7
Haze_03500 Corylus avellana HOM05D006407 ORTHO05D008079 5.7e-154 548.1 395 74.7
Gohir.A07G159200 Gossypium hirsutum HOM05D006407 ORTHO05D008079 9.7e-154 547.4 346 83.2
Sed0008140 Sechium edule HOM05D006407 ORTHO05D008079 2.2e-153 546.2 353 78.8
Ah.11g051020 Amaranthus hybridus HOM05D006407 ORTHO05D008079 3.7e-153 545.4 393 74.3
Manes.12G054200 Manihot esculenta HOM05D006407 ORTHO05D008079 6.3e-153 544.7 366 79.2
THA.LOC104802645 Tarenaya hassleriana HOM05D006407 ORTHO05D008079 5.3e-152 541.6 347 81.3
Actinidia30017 Actinidia chinensis HOM05D006407 ORTHO05D008079 9.1e-152 540.8 349 81.9
Cfa010568 Carpinus fangiana HOM05D006407 ORTHO05D008079 1.2e-151 540.4 411 72.5
TWI18G0256 Tripterygium wilfordii HOM05D006407 ORTHO05D008079 1.6e-151 540.0 418 72.2
BcaB04g19579 Brassica carinata HOM05D006407 ORTHO05D008079 3.5e-151 538.9 368 76.6
AT5G48470 Arabidopsis thaliana HOM05D006407 ORTHO05D008079 5.9e-151 538.1 369 77.5
Sc17g0001660 Simmondsia chinensis HOM05D006407 ORTHO05D008079 7.7e-151 537.7 345 81.4
ClCG09G008210 Citrullus lanatus HOM05D006407 ORTHO05D008079 1.0e-150 537.3 350 77.4
Carub.0008s0805 Capsella rubella HOM05D006407 ORTHO05D008079 1.3e-150 537.0 409 72.9
CANSAT01G1280 Cannabis sativa HOM05D006407 ORTHO05D008079 1.7e-150 536.6 407 72.5
CARHR183610 Cardamine hirsuta HOM05D006407 ORTHO05D008079 1.7e-150 536.6 368 76.9
Aa31sc527G10 Aethionema arabicum HOM05D006407 ORTHO05D008079 2.9e-150 535.8 346 80.9
CsaV3_7G026830 Cucumis sativus L. HOM05D006407 ORTHO05D008079 2.9e-150 535.8 350 77.1
CSS0030734 Camellia sinensis var. sinensis HOM05D006407 ORTHO05D008079 5.0e-150 535.0 361 78.7
TAR636G1997 Trochodendron aralioides HOM05D006407 ORTHO05D008079 1.1e-149 533.9 345 79.4
BcaC04g23774 Brassica carinata HOM05D006407 ORTHO05D008079 1.9e-149 533.1 368 76.4
BolC9t53411H Brassica oleracea HOM05D006407 ORTHO05D008079 1.9e-149 533.1 368 76.4
C09p04840 Brassica napus HOM05D006407 ORTHO05D008079 2.5e-149 532.7 368 76.1
CSS0036527 Camellia sinensis var. sinensis HOM05D006407 ORTHO05D008079 3.2e-149 532.3 361 78.4
TWI36G1400 Tripterygium wilfordii HOM05D006407 ORTHO05D008079 3.2e-149 532.3 422 70.6
RcHm_v2.0_Chr6g0282821 Rosa chinensis HOM05D006407 ORTHO05D008079 4.2e-149 531.9 415 72.3
AL8G21320 Arabidopsis lyrata HOM05D006407 ORTHO05D008079 5.5e-149 531.6 410 72.0
Thhalv10004357m.g Eutrema salsugineum HOM05D006407 ORTHO05D008079 5.5e-149 531.6 347 79.5
GSVIVG01006226001 Vitis vinifera HOM05D006407 ORTHO05D008079 9.4e-149 530.8 342 80.7
A09p04530 Brassica napus HOM05D006407 ORTHO05D008079 1.2e-148 530.4 368 75.5
BraA09t36088Z Brassica rapa HOM05D006407 ORTHO05D008079 1.2e-148 530.4 346 79.2
Potri.002G251400 Populus trichocarpa HOM05D006407 ORTHO05D008079 1.6e-148 530.0 346 80.1
Hma1.2p1_0161F.1_g071410 Hydrangea macrophylla HOM05D006407 ORTHO05D008079 3.6e-148 528.9 346 78.9
Aqoxy2G03962 Aquilegia oxysepala HOM05D006407 ORTHO05D008079 4.7e-148 528.5 346 80.1
FvH4_2g17800 Fragaria vesca HOM05D006407 ORTHO05D008079 1.8e-147 526.6 409 72.9
Prupe.8G190300 Prunus persica HOM05D006407 ORTHO05D008079 4.0e-147 525.4 417 69.5
FAN24G2889 Fragaria x ananassa HOM05D006407 ORTHO05D008079 5.2e-147 525.0 409 72.6
Psat6g036520 Pisum sativum HOM05D006407 ORTHO05D008079 8.8e-147 524.2 344 80.2
FAN15G1719 Fragaria x ananassa HOM05D006407 ORTHO05D008079 1.5e-146 523.5 409 71.6
FAN27G2095 Fragaria x ananassa HOM05D006407 ORTHO05D008079 1.5e-146 523.5 403 72.7
FAN27G3088 Fragaria x ananassa HOM05D006407 ORTHO05D008079 1.5e-146 523.5 403 72.7
PSO017G7241 Papaver somniferum HOM05D006407 ORTHO05D008079 2.6e-146 522.7 344 79.4
MSTRG.18495 Avicennia marina HOM05D006407 ORTHO05D008079 6.3e-145 518.1 354 76.6
Sopen09g019480 Solanum pennellii HOM05D006407 ORTHO05D008079 6.3e-145 518.1 345 77.7
Peaxi162Scf00335g00087 Petunia axillaris HOM05D006407 ORTHO05D008079 1.1e-144 517.3 388 71.4
Sp2g18840 Schrenkiella parvula HOM05D006407 ORTHO05D008079 1.1e-144 517.3 317 83.3
Hund02795 Selenicereus undatus HOM05D006407 ORTHO05D008079 2.4e-144 516.2 349 77.7
Oeu057833.1 Olea europaea HOM05D006407 ORTHO05D008079 5.3e-144 515.0 321 81.6
PGSC0003DMG400013943 Solanum tuberosum HOM05D006407 ORTHO05D008079 7.0e-144 514.6 345 76.8
AUR62008121 Chenopodium quinoa HOM05D006407 ORTHO05D008079 5.9e-143 511.5 435 67.4
Cc01_g16130 Coffea canephora HOM05D006407 ORTHO05D008079 5.9e-143 511.5 349 75.9
Solyc09g056160.4 Solanum lycopersicum HOM05D006407 ORTHO05D008079 1.7e-142 510.0 345 77.1
PSO675G1275 Papaver somniferum HOM05D006407 ORTHO05D008079 3.8e-142 508.8 416 68.8
MD10G1151900 Malus domestica HOM05D006407 ORTHO05D008079 1.1e-141 507.3 351 75.2
Rhsim13G0052700 Rhododendron simsii HOM05D006407 ORTHO05D008079 1.5e-141 506.9 331 78.2
COL.COLO4_26571 Corchorus olitorius HOM05D006407 ORTHO05D008079 2.5e-141 506.1 350 78.3
EL10Ac5g10625 Beta vulgaris HOM05D006407 ORTHO05D008079 4.2e-141 505.4 332 78.6
Medtr1g007490 Medicago truncatula HOM05D006407 ORTHO05D008079 5.5e-141 505.0 378 72.5
Gohir.D07G167200 Gossypium hirsutum HOM05D006407 ORTHO05D008079 1.2e-140 503.8 346 78.9
ECA247G2281 Erigeron canadensis HOM05D006407 ORTHO05D008079 2.1e-140 503.1 353 75.9
vmacro02816 Vaccinium macrocarpon HOM05D006407 ORTHO05D008079 2.1e-140 503.1 393 69.2
Lj1g0005258 Lotus japonicus HOM05D006407 ORTHO05D008079 3.6e-140 502.3 344 78.5
HanXRQChr08g0231421 Helianthus annuus HOM05D006407 ORTHO05D008079 1.5e-138 496.9 352 75.3
Lalb_Chr07g0194511 Lupinus albus HOM05D006407 ORTHO05D008079 1.5e-138 496.9 350 75.4
Lj1C101T0 Lonicera japonica HOM05D006407 ORTHO05D008079 9.8e-138 494.2 344 76.5
Lsat_1_v5_gn_9_16300 Lactuca sativa HOM05D006407 ORTHO05D008079 8.3e-137 491.1 398 69.1
Migut.D00736 Erythranthe guttata HOM05D006407 ORTHO05D008079 1.4e-136 490.3 303 82.8
Glyma.16G083300 Glycine max HOM05D006407 ORTHO05D008079 1.2e-135 487.3 348 73.0
Glyma.03G089700 Glycine max HOM05D006407 ORTHO05D008079 4.5e-135 485.3 360 71.4
arahy.Tifrunner.gnm1.ann1.FHDW0K Arachis hypogaea HOM05D006407 ORTHO05D008079 1.7e-134 483.4 344 73.8
arahy.Tifrunner.gnm1.ann1.Q8L9VW Arachis hypogaea HOM05D006407 ORTHO05D008079 1.7e-134 483.4 344 73.8
Ca_12772_v3 Cicer arietinum L. HOM05D006407 ORTHO05D008079 6.5e-134 481.5 293 84.0
Phvul.008G108300 Phaseolus vulgaris HOM05D006407 ORTHO05D008079 2.5e-133 479.6 351 70.9
HPP92_024258 Vanilla planifolia HOM05D006407 ORTHO05D008079 9.4e-133 477.6 352 72.7
ATR0686G167 Amborella trichopoda HOM05D006407 ORTHO05D008079 1.6e-132 476.9 350 70.0
Zm00001eb169280 Zea mays HOM05D006407 ORTHO05D008079 7.5e-130 468.0 318 73.6
Nitab4.5_0000038g0130 Nicotiana tabacum HOM05D006407 ORTHO05D008079 3.7e-129 465.7 360 70.6
Nitab4.5_0003859g0020 Nicotiana tabacum HOM05D001236 ORTHO05D001090 8.3e-129 464.5 309 78.3
unitig_64.g29771 Utricularia gibba HOM05D006407 ORTHO05D008079 8.3e-129 464.5 315 75.2
Atru.chr6.3545 Acer truncatum HOM05D006407 ORTHO05D008079 5.0e-126 455.3 311 78.5
Sabra02G0191100 Salix brachista HOM05D006407 ORTHO05D008079 1.4e-123 447.2 326 73.0
SalBow6G2639 Salvia bowleyana HOM05D006407 ORTHO05D008079 1.4e-123 447.2 284 79.9
SGA_v2.0_scaffold29G12072 Striga asiatica HOM05D006407 ORTHO05D008079 3.4e-122 442.6 387 63.8
VMungo1383G2551 Vigna mungo HOM05D006407 ORTHO05D008079 2.2e-113 413.3 377 61.3
Os11g0425300 Oryza sativa ssp. japonica HOM05D006407 ORTHO05D008079 1.7e-110 403.7 285 72.3
SEGI_39839 Sequoiadendron giganteum HOM05D006407 ORTHO05D008079 1.9e-104 383.6 335 60.3
CDE09G0438 Ceratophyllum demersum HOM05D006407 ORTHO05D008079 2.3e-99 366.7 239 79.1
Duzib138G1048 Durio zibethinus HOM05D006407 ORTHO05D008079 9.0e-83 311.6 440 49.8
unitig_62.g23866 Utricularia gibba HOM05D006407 ORTHO05D008079 1.4e-80 304.3 287 59.9
HPP92_024262 Vanilla planifolia HOM05D006407 ORTHO05D008079 2.4e-80 303.5 198 76.8
Mapoly0125s0038 Marchantia polymorpha HOM05D006407 ORTHO05D008079 5.4e-80 302.4 332 47.9
BolC7t44437H Brassica oleracea HOM05D006407 ORTHO05D008079 7.9e-79 298.5 295 63.1
Nn1g08257 Nelumbo nucifera HOM05D006407 ORTHO05D008079 1.7e-78 297.4 220 72.3
SMO367G1011 Selaginella moellendorffii HOM05D006407 ORTHO05D008079 1.1e-77 294.7 313 50.2
Pp3c19_21450 Physcomitrium patens HOM05D006407 ORTHO05D008079 6.2e-76 288.9 325 47.4
C07p39170 Brassica napus HOM05D006407 ORTHO05D008079 2.0e-74 283.9 282 61.7
MBI11_g07407_MAGBIO Magnolia biondii HOM05D006407 ORTHO05D003073 4.6e-71 272.7 900 29.1
AagrBONN_evm.TU.Sc2ySwM_368.2294 Anthoceros agrestis HOM05D006407 ORTHO05D008079 3.3e-69 266.5 247 55.9
BcaC06g30794 Brassica carinata HOM05D006407 ORTHO05D008079 4.5e-66 256.1 475 39.6
Nn1g08232 Nelumbo nucifera HOM05D006407 ORTHO05D008079 1.7e-65 254.2 157 81.5
AUR62028699 Chenopodium quinoa HOM05D006407 ORTHO05D008079 6.7e-54 215.7 142 78.9
DCAR_004768 Daucus carota HOM05D006407 ORTHO05D008079 1.6e-47 194.5 157 69.4
BraA06t26831Z Brassica rapa HOM05D006407 ORTHO05D008079 5.0e-41 172.9 124 73.4
Migut.D00733 Erythranthe guttata HOM05D006407 ORTHO05D008079 2.5e-40 170.6 105 82.9
CBR_g12604 Chara braunii HOM05D001724 ORTHO05D007284 1.6e-34 151.4 269 35.7
A06p39160 Brassica napus HOM05D006407 ORTHO05D008079 5.0e-33 146.4 177 50.3
CDE02G0544 Ceratophyllum demersum HOM05D006407 ORTHO05D008079 1.5e-24 118.2 82 72.0
MCO11G451 Micromonas commoda HOM05D006407 ORTHO05D008079 2.8e-15 87.4 144 35.4
Lsat_1_v5_gn_9_60420 Lactuca sativa HOM05D001780 ORTHO05D008079 2.6e-13 80.9 46 82.6
Cre09.g393800 Chlamydomonas reinhardtii HOM05D006407 ORTHO05D008079 5.7e-13 79.7 273 28.9
arahy.Tifrunner.gnm1.ann1.91BFZF Arachis hypogaea HOM05D006407 ORTHO05D008079 1.7e-12 78.2 78 53.8
Oeu032606.1 Olea europaea HOM05D006407 ORTHO05D008079 2.8e-12 77.4 48 79.2
MD05G1159200 Malus domestica HOM05D006407 ORTHO05D008079 1.8e-11 74.7 49 73.5
arahy.Tifrunner.gnm1.ann1.6HQ4SR Arachis hypogaea HOM05D006407 ORTHO05D008079 1.1e-08 65.5 71 52.1
MD05G1159400 Malus domestica HOM05D006407 ORTHO05D008079 3.6e-07 60.5 66 50.0


User provided reference genes

Program Settings