Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.H00681 Eucalyptus grandis HOM05D003822 ORTHO05D004484 1.7e-139 499.6 306 100.0
Gorai.007G162100 Gossypium raimondii HOM05D003822 ORTHO05D004484 2.4e-93 346.3 309 68.6
Hma1.2p1_0635F.1_g193140 Hydrangea macrophylla HOM05D003822 ORTHO05D004484 3.2e-93 345.9 320 67.8
Gohir.D11G153200 Gossypium hirsutum HOM05D003822 ORTHO05D004484 7.1e-93 344.7 309 68.3
Hma1.2p1_2403F.1_g321420 Hydrangea macrophylla HOM05D003822 ORTHO05D004484 1.1e-90 337.4 324 66.4
Gohir.A11G145000 Gossypium hirsutum HOM05D003822 ORTHO05D004484 2.5e-90 336.3 308 67.5
TAR633G2284 Trochodendron aralioides HOM05D003822 ORTHO05D004484 5.6e-90 335.1 294 74.8
COL.COLO4_29926 Corchorus olitorius HOM05D003822 ORTHO05D004484 6.2e-89 331.6 315 66.0
VMungo1080G0920 Vigna mungo HOM05D003822 ORTHO05D004484 1.1e-88 330.9 304 67.8
Peaxi162Scf00995g00322 Petunia axillaris HOM05D003822 ORTHO05D004484 1.7e-86 323.6 303 67.7
SGA_v2.0_scaffold77G25327 Striga asiatica HOM05D003822 ORTHO05D004484 2.2e-86 323.2 301 64.1
TPR.G6564 Trifolium pratense HOM05D003822 ORTHO05D004484 1.4e-85 320.5 315 66.3
QL10p052081 Quercus lobata HOM05D003822 ORTHO05D004484 1.9e-85 320.1 310 70.0
Thecc.01G205200 Theobroma cacao HOM05D003822 ORTHO05D004484 5.4e-85 318.5 324 65.1
Glyma.13G346400 Glycine max HOM05D003822 ORTHO05D004484 1.2e-84 317.4 311 66.9
Glyma.15G027800 Glycine max HOM05D003822 ORTHO05D004484 4.6e-84 315.5 310 67.1
vmacro14674 Vaccinium macrocarpon HOM05D003822 ORTHO05D004484 4.6e-84 315.5 300 68.3
Duzib211G0255 Durio zibethinus HOM05D003822 ORTHO05D004484 6.0e-84 315.1 308 67.9
FAN08G2486 Fragaria x ananassa HOM05D003822 ORTHO05D004484 1.3e-83 313.9 312 64.1
Oeu013421.2 Olea europaea HOM05D003822 ORTHO05D004484 2.3e-83 313.2 306 70.3
Duzib133G0954 Durio zibethinus HOM05D003822 ORTHO05D004484 5.1e-83 312.0 310 68.1
TAR362G1102 Trochodendron aralioides HOM05D003822 ORTHO05D004484 5.1e-83 312.0 302 66.2
Solyc06g007700.4 Solanum lycopersicum HOM05D003822 ORTHO05D004484 6.6e-83 311.6 310 65.5
TWI36G1391 Tripterygium wilfordii HOM05D003822 ORTHO05D004484 2.5e-82 309.7 303 65.0
TWI36G1709 Tripterygium wilfordii HOM05D003822 ORTHO05D004484 2.5e-82 309.7 303 65.0
Ciclev10016105m.g Citrus clementina HOM05D003822 ORTHO05D004484 4.3e-82 308.9 313 71.6
Manes.13G057600 Manihot esculenta HOM05D003822 ORTHO05D004484 4.3e-82 308.9 304 68.4
Nn7g37555 Nelumbo nucifera HOM05D003822 ORTHO05D004484 7.3e-82 308.1 307 63.8
Actinidia23132 Actinidia chinensis HOM05D003822 ORTHO05D004484 9.6e-82 307.8 306 60.8
Haze_01421 Corylus avellana HOM05D003822 ORTHO05D004484 1.3e-81 307.4 298 71.8
THA.LOC104822456 Tarenaya hassleriana HOM05D003822 ORTHO05D004484 1.3e-81 307.4 312 64.1
Eucgr.A00039 Eucalyptus grandis HOM05D003822 ORTHO05D004484 1.6e-81 307.0 309 63.1
Prupe.1G200400 Prunus persica HOM05D003822 ORTHO05D004484 1.6e-81 307.0 311 67.5
Sc19g0002790 Simmondsia chinensis HOM05D003822 ORTHO05D004484 1.6e-81 307.0 292 65.8
TWI18G0659 Tripterygium wilfordii HOM05D003822 ORTHO05D004484 2.8e-81 306.2 305 67.9
Cfa015215 Carpinus fangiana HOM05D003822 ORTHO05D004484 4.8e-81 305.4 305 69.8
Cc02_g30690 Coffea canephora HOM05D003822 ORTHO05D004484 8.1e-81 304.7 303 68.6
Nn1g09539 Nelumbo nucifera HOM05D003822 ORTHO05D004484 4.0e-80 302.4 302 67.5
FAN18G3379 Fragaria x ananassa HOM05D003822 ORTHO05D004484 1.2e-79 300.8 325 65.2
Nitab4.5_0002641g0020 Nicotiana tabacum HOM05D003822 ORTHO05D004484 1.5e-79 300.4 319 63.9
MELO3C017788.2 Cucumis melo HOM05D003822 ORTHO05D004484 2.6e-79 299.7 300 69.7
Glyma.11G125400 Glycine max HOM05D003822 ORTHO05D004484 2.6e-79 299.7 301 61.1
arahy.Tifrunner.gnm1.ann1.0NAL6S Arachis hypogaea HOM05D003822 ORTHO05D004484 3.4e-79 299.3 324 67.0
Ca_01239_v3 Cicer arietinum L. HOM05D003822 ORTHO05D004484 5.8e-79 298.5 306 66.3
ECA236G4570 Erigeron canadensis HOM05D003822 ORTHO05D004484 7.6e-79 298.1 326 57.7
ECA248G1190 Erigeron canadensis HOM05D002050 ORTHO05D001949 7.6e-79 298.1 285 59.6
arahy.Tifrunner.gnm1.ann1.1KAH27 Arachis hypogaea HOM05D003822 ORTHO05D004484 9.9e-79 297.7 327 65.4
Potri.017G018400 Populus trichocarpa HOM05D003822 ORTHO05D004484 1.3e-78 297.4 305 68.5
unitig_22.g5196 Utricularia gibba HOM05D003822 ORTHO05D004484 1.3e-78 297.4 304 64.1
VMungo1127G1572 Vigna mungo HOM05D003822 ORTHO05D004484 1.7e-78 297.0 296 60.8
FAN04G1289 Fragaria x ananassa HOM05D003822 ORTHO05D004484 2.9e-78 296.2 318 65.1
CiPaw.01G173700 Carya illinoinensis HOM05D003822 ORTHO05D004484 4.9e-78 295.4 304 70.7
Lalb_Chr22g0352031 Lupinus albus HOM05D003822 ORTHO05D004484 4.9e-78 295.4 318 62.9
Lalb_Chr24g0396641 Lupinus albus HOM05D003822 ORTHO05D004484 6.4e-78 295.0 340 58.2
TAR365G1107 Trochodendron aralioides HOM05D003822 ORTHO05D004484 1.4e-77 293.9 286 69.6
MSTRG.17947 Avicennia marina HOM05D003822 ORTHO05D004484 5.4e-77 292.0 312 61.2
Nitab4.5_0003952g0050 Nicotiana tabacum HOM05D003822 ORTHO05D004484 5.4e-77 292.0 329 57.8
CiPaw.02G103400 Carya illinoinensis HOM05D003822 ORTHO05D004484 7.1e-77 291.6 307 68.1
AUR62002363 Chenopodium quinoa HOM05D003822 ORTHO05D004484 7.1e-77 291.6 298 68.1
Actinidia34522 Actinidia chinensis HOM05D003822 ORTHO05D004484 2.7e-76 289.7 326 58.0
Sabra17G0014400 Salix brachista HOM05D000455 ORTHO05D000434 2.7e-76 289.7 299 69.2
Phvul.005G155400 Phaseolus vulgaris HOM05D003822 ORTHO05D004484 7.9e-76 288.1 296 66.6
FvH4_5g32960 Fragaria vesca HOM05D003822 ORTHO05D004484 1.3e-75 287.3 327 63.3
Sabra14G0133100 Salix brachista HOM05D003822 ORTHO05D004484 1.3e-75 287.3 314 61.5
Ah.07g202460 Amaranthus hybridus HOM05D003822 ORTHO05D004484 2.3e-75 286.6 309 62.1
Ciclev10021425m.g Citrus clementina HOM05D003822 ORTHO05D004484 3.9e-75 285.8 306 69.0
Dinv28779 Davidia involucrata HOM05D003822 ORTHO05D004484 3.9e-75 285.8 290 66.9
Sabra07G0108500 Salix brachista HOM05D003822 ORTHO05D004484 8.7e-75 284.6 303 64.7
Sabra07G0120800 Salix brachista HOM05D003822 ORTHO05D004484 8.7e-75 284.6 303 64.7
Sed0021377 Sechium edule HOM05D003822 ORTHO05D004484 3.3e-74 282.7 304 66.4
RcHm_v2.0_Chr1g0340971 Rosa chinensis HOM05D003822 ORTHO05D004484 4.3e-74 282.3 312 58.3
Sopen06g002590 Solanum pennellii HOM05D003822 ORTHO05D004484 5.6e-74 282.0 318 61.6
Duzib138G1354 Durio zibethinus HOM05D003822 ORTHO05D004484 1.6e-73 280.4 307 67.4
HanXRQChr01g0010521 Helianthus annuus HOM05D003822 ORTHO05D004484 1.6e-73 280.4 302 63.6
Medtr2g099360 Medicago truncatula HOM05D003822 ORTHO05D004484 2.1e-73 280.0 344 55.5
Aqoxy2G04159 Aquilegia oxysepala HOM05D003822 ORTHO05D004484 2.8e-73 279.6 305 64.3
HanXRQChr10g0281191 Helianthus annuus HOM05D003822 ORTHO05D004484 3.7e-73 279.3 307 57.7
Atru.chr6.3488 Acer truncatum HOM05D003822 ORTHO05D004484 4.8e-73 278.9 316 67.7
MD04G1046700 Malus domestica HOM05D003822 ORTHO05D004484 4.8e-73 278.9 320 61.9
EL10Ac3g06027 Beta vulgaris HOM05D003822 ORTHO05D004484 8.1e-73 278.1 299 66.9
RcHm_v2.0_Chr7g0230961 Rosa chinensis HOM05D003822 ORTHO05D004484 1.4e-72 277.3 323 62.8
Thhalv10021215m.g Eutrema salsugineum HOM05D003822 ORTHO05D004484 5.3e-72 275.4 310 61.6
Lj3g0026330 Lotus japonicus HOM05D003822 ORTHO05D004484 1.5e-71 273.9 312 67.6
PGSC0003DMG400020658 Solanum tuberosum HOM05D003822 ORTHO05D004484 1.5e-71 273.9 311 62.7
THA.LOC104819024 Tarenaya hassleriana HOM05D003822 ORTHO05D004484 5.8e-71 271.9 309 62.5
PGR083G0513 Punica granatum HOM05D003822 ORTHO05D004484 2.2e-70 270.0 307 63.5
Hund03185 Selenicereus undatus HOM05D003822 ORTHO05D004484 2.9e-70 269.6 298 61.4
Carub.0003s0711 Capsella rubella HOM05D003822 ORTHO05D004484 3.8e-70 269.2 312 65.7
Peaxi162Scf00372g00722 Petunia axillaris HOM05D003822 ORTHO05D004484 3.8e-70 269.2 312 62.5
MBI02_g24302_MAGBIO Magnolia biondii HOM05D003822 ORTHO05D004484 8.4e-70 268.1 314 62.4
Sabra17G0002300 Salix brachista HOM05D000455 ORTHO05D000434 8.4e-70 268.1 342 59.1
PSO017G3256 Papaver somniferum HOM05D003822 ORTHO05D004484 1.4e-69 267.3 322 61.2
Sed0005976 Sechium edule HOM05D003822 ORTHO05D004484 1.9e-69 266.9 298 66.8
Cpa.g.sc8.23 Carica papaya HOM05D003822 ORTHO05D004484 2.5e-69 266.5 309 60.5
Potri.014G197200 Populus trichocarpa HOM05D003822 ORTHO05D004484 2.5e-69 266.5 310 66.5
PSO837G0022 Papaver somniferum HOM05D003822 ORTHO05D004484 3.2e-69 266.2 322 61.2
AT3G07560 Arabidopsis thaliana HOM05D003822 ORTHO05D004484 5.5e-69 265.4 323 57.0
Manes.12G057507 Manihot esculenta HOM05D003822 ORTHO05D004484 1.6e-68 263.8 294 62.6
Manes.12G057905 Manihot esculenta HOM05D003822 ORTHO05D004484 1.6e-68 263.8 294 62.6
CANSAT11G1915 Cannabis sativa HOM05D003822 ORTHO05D004484 2.1e-68 263.5 317 67.2
CANSAT56G4141 Cannabis sativa HOM05D003822 ORTHO05D004484 2.1e-68 263.5 325 65.2
AL3G18900 Arabidopsis lyrata HOM05D003822 ORTHO05D004484 2.7e-68 263.1 314 58.9
PGR102G0947 Punica granatum HOM05D003822 ORTHO05D004484 2.7e-68 263.1 303 59.1
CsaV3_4G002560 Cucumis sativus L. HOM05D003822 ORTHO05D004484 3.5e-68 262.7 304 67.4
Lsat_1_v5_gn_8_98601 Lactuca sativa HOM05D003822 ORTHO05D004484 3.5e-68 262.7 310 63.5
CSS0026869 Camellia sinensis var. sinensis HOM05D003822 ORTHO05D004484 1.3e-67 260.8 301 64.5
CAN.G181.49 Capsicum annuum HOM05D003822 ORTHO05D004484 1.3e-67 260.8 312 62.5
Lj3g0024368 Lotus japonicus HOM05D003822 ORTHO05D004484 1.8e-67 260.4 296 64.2
Sp3g06480 Schrenkiella parvula HOM05D003822 ORTHO05D004484 3.0e-67 259.6 308 61.7
Manes.12G058903 Manihot esculenta HOM05D003822 ORTHO05D004484 7.4e-66 255.0 306 59.5
MD00G1127600 Malus domestica HOM05D003822 ORTHO05D004484 1.3e-65 254.2 297 61.3
BraA05t22796Z Brassica rapa HOM05D003822 ORTHO05D004484 2.1e-65 253.4 319 56.7
A05p40650 Brassica napus HOM05D003822 ORTHO05D004484 6.2e-65 251.9 312 57.7
CDE05G3137 Ceratophyllum demersum HOM05D003822 ORTHO05D004484 6.2e-65 251.9 296 56.1
HPP92_015668 Vanilla planifolia HOM05D003822 ORTHO05D004484 6.2e-65 251.9 304 56.2
ClCG07G011660 Citrullus lanatus HOM05D003822 ORTHO05D004484 1.8e-64 250.4 393 52.4
Aa31LG5G18100 Aethionema arabicum HOM05D003822 ORTHO05D004484 6.9e-64 248.4 328 54.0
SGA_v2.0_scaffold95G28678 Striga asiatica HOM05D003822 ORTHO05D004484 2.0e-63 246.9 233 68.7
BcaB03g14694 Brassica carinata HOM05D003822 ORTHO05D004484 2.6e-63 246.5 320 58.4
C05p59760 Brassica napus HOM05D003822 ORTHO05D004484 1.4e-61 240.7 316 51.9
Manes.11G127100 Manihot esculenta HOM05D003822 ORTHO05D004484 3.2e-61 239.6 262 59.9
C03p42940 Brassica napus HOM05D003822 ORTHO05D004484 4.2e-61 239.2 331 55.6
CDE02G4798 Ceratophyllum demersum HOM05D003822 ORTHO05D004484 1.2e-60 237.7 312 51.0
BcaC01g04277 Brassica carinata HOM05D003822 ORTHO05D004484 2.1e-60 236.9 329 55.6
Zm00001eb117520 Zea mays HOM05D003822 ORTHO05D004484 4.6e-60 235.7 306 54.2
A03p35330 Brassica napus HOM05D003822 ORTHO05D004484 3.0e-59 233.0 333 55.3
ATR0752G090 Amborella trichopoda HOM05D003822 ORTHO05D004484 6.7e-59 231.9 296 56.4
AUR62023822 Chenopodium quinoa HOM05D003822 ORTHO05D004484 6.7e-59 231.9 297 53.5
Os07g0152800 Oryza sativa ssp. japonica HOM05D003822 ORTHO05D004484 6.7e-59 231.9 306 54.9
BolC5t34630H Brassica oleracea HOM05D003822 ORTHO05D004484 8.7e-59 231.5 323 52.0
Migut.N00690 Erythranthe guttata HOM05D003822 ORTHO05D004484 3.3e-58 229.6 314 63.1
Zm00001eb059960 Zea mays HOM05D003822 ORTHO05D004484 2.2e-57 226.9 299 51.8
Os03g0786000 Oryza sativa ssp. japonica HOM05D003822 ORTHO05D004484 2.8e-57 226.5 298 56.0
BolC3t16562H Brassica oleracea HOM05D003822 ORTHO05D004484 5.3e-56 222.2 324 55.2
BcaB04g21287 Brassica carinata HOM05D003822 ORTHO05D004484 9.0e-56 221.5 303 52.1
BcaC05g29550 Brassica carinata HOM05D003822 ORTHO05D004484 5.0e-54 215.7 301 54.5
Lsat_1_v5_gn_5_175601 Lactuca sativa HOM05D003822 ORTHO05D004484 6.1e-52 208.8 290 55.5
SEGI_01562 Sequoiadendron giganteum HOM05D003822 ORTHO05D004484 7.9e-52 208.4 331 44.4
CSS0006211 Camellia sinensis var. sinensis HOM05D003822 ORTHO05D004484 2.3e-51 206.8 234 61.1
Oeu020438.1 Olea europaea HOM05D003822 ORTHO05D004484 6.7e-51 205.3 217 71.4
Gorai.N001500 Gossypium raimondii HOM05D003822 ORTHO05D004484 3.3e-50 203.0 309 52.8
SEGI_07594 Sequoiadendron giganteum HOM05D003822 ORTHO05D004484 1.3e-49 201.1 322 45.3
PGSC0003DMG400020552 Solanum tuberosum HOM05D003822 ORTHO05D004484 2.8e-49 199.9 132 74.2
Actinidia11655 Actinidia chinensis HOM05D003822 ORTHO05D004484 2.4e-48 196.8 223 65.0
MBI18_g24478_MAGBIO Magnolia biondii HOM05D003822 ORTHO05D004484 2.2e-46 190.3 282 52.1
Phvul.011G052000 Phaseolus vulgaris HOM05D003822 ORTHO05D004484 2.9e-46 189.9 127 72.4
Psat5g291600 Pisum sativum HOM05D003822 ORTHO05D004484 6.1e-44 182.2 260 56.5
Lj2C1109G11 Lonicera japonica HOM05D003822 ORTHO05D004484 6.7e-43 178.7 308 48.4
BolC1t05546H Brassica oleracea HOM05D003822 ORTHO05D004484 1.1e-40 171.4 249 54.6
BraA01t04376Z Brassica rapa HOM05D003822 ORTHO05D004484 2.6e-39 166.8 135 63.7
MSTRG.12733 Avicennia marina HOM05D003822 ORTHO05D004484 1.9e-37 160.6 214 56.5
SMO146G0020 Selaginella moellendorffii HOM05D003822 ORTHO05D004484 6.1e-36 155.6 325 44.6
Manes.12G058104 Manihot esculenta HOM05D003822 ORTHO05D004484 3.9e-35 152.9 101 78.2
unitig_8.g3681 Utricularia gibba HOM05D003822 ORTHO05D004484 6.7e-35 152.1 106 73.6
Pp3c11_19790 Physcomitrium patens HOM05D003822 ORTHO05D004484 2.9e-30 136.7 315 46.7
Mapoly0080s0067 Marchantia polymorpha HOM05D003822 ORTHO05D004484 8.5e-30 135.2 333 47.1
CARHR082240 Cardamine hirsuta HOM05D003822 ORTHO05D004484 1.9e-29 134.0 204 65.2
AagrBONN_evm.TU.Sc2ySwM_368.3329 Anthoceros agrestis HOM05D003822 ORTHO05D004484 7.2e-29 132.1 303 44.2
CBR_g38951 Chara braunii HOM05D003822 ORTHO05D004484 9.4e-29 131.7 339 44.0
Eucgr.B03613 Eucalyptus grandis HOM05D003822 ORTHO05D004484 3.0e-27 126.7 68 94.1
FAN01G1095 Fragaria x ananassa HOM05D003822 ORTHO05D004484 4.0e-27 126.3 222 53.6
MSTRG.12731 Avicennia marina HOM05D003822 ORTHO05D004484 1.5e-26 124.4 99 62.6
CSS0030404 Camellia sinensis var. sinensis HOM05D003822 ORTHO05D004484 2.6e-26 123.6 88 69.3
Oeu020439.1 Olea europaea HOM05D003822 ORTHO05D004484 2.2e-25 120.6 80 72.5
Gohir.A07G157900 Gossypium hirsutum HOM05D003822 ORTHO05D004484 4.8e-25 119.4 107 61.7
Eucgr.C02476 Eucalyptus grandis HOM05D003822 ORTHO05D004484 6.3e-25 119.0 63 93.7
FAN06G0586 Fragaria x ananassa HOM05D003822 ORTHO05D004484 2.7e-23 113.6 151 62.3
Thecc.04G171800 Theobroma cacao HOM05D003822 ORTHO05D004484 1.5e-21 107.8 77 68.8
Atru.chr4.1339 Acer truncatum HOM05D003822 ORTHO05D004484 2.5e-21 107.1 101 61.4
Hma1.2p1_0161F.1_g071790 Hydrangea macrophylla HOM05D003822 ORTHO05D004484 1.4e-19 101.3 152 44.1
FvH4_7g08180 Fragaria vesca HOM05D003822 ORTHO05D046505 1.8e-19 100.9 87 62.1
FAN10G3558 Fragaria x ananassa HOM05D003822 ORTHO05D046505 4.4e-18 96.3 328 31.7
CARHR082220 Cardamine hirsuta HOM05D003822 ORTHO05D004484 1.2e-15 88.2 110 47.3
Cre13.g574700 Chlamydomonas reinhardtii HOM05D003822 ORTHO05D004484 1.0e-14 85.1 64 60.9
MCO15G241 Micromonas commoda HOM05D003822 ORTHO05D004484 1.5e-13 81.3 294 42.9
SEGI_02285 Sequoiadendron giganteum HOM05D003822 ORTHO05D004484 1.2e-12 78.2 91 51.6
FAN01G2016 Fragaria x ananassa HOM05D003822 ORTHO05D004484 3.6e-12 76.6 44 84.1
SEGI_40649 Sequoiadendron giganteum HOM05D003822 ORTHO05D004484 1.8e-11 74.3 99 49.5
FAN06G2565 Fragaria x ananassa HOM05D003822 ORTHO05D001690 6.3e-09 65.9 86 46.5
Zm00001eb392350 Zea mays HOM05D000367 ORTHO05D001438 1.0e-06 58.5 44 70.5
ATR0737G020 Amborella trichopoda HOM05D003822 ORTHO05D004484 1.3e-06 58.2 76 46.1
CBR_g50337 Chara braunii HOM05D003822 ORTHO05D004484 1.3e-06 58.2 271 45.0
SEGI_24544 Sequoiadendron giganteum HOM05D003822 ORTHO05D004484 1.7e-06 57.8 97 45.4
SEGI_25865 Sequoiadendron giganteum HOM05D000010 ORTHO05D004484 1.7e-06 57.8 79 46.8


User provided reference genes

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