Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.H00675 Eucalyptus grandis HOM05D006993 ORTHO05D008336 2.0e-91 339.3 204 100.0
Atru.chr6.3467 Acer truncatum HOM05D006993 ORTHO05D008336 3.7e-53 212.2 212 64.2
Ciclev10016771m.g Citrus clementina HOM05D006993 ORTHO05D008336 6.2e-53 211.5 198 62.1
PGR083G2302 Punica granatum HOM05D006993 ORTHO05D008336 1.1e-52 210.7 211 71.1
CiPaw.13G058900 Carya illinoinensis HOM05D006993 ORTHO05D008336 3.4e-51 205.7 217 60.8
Manes.13G058300 Manihot esculenta HOM05D006993 ORTHO05D008336 3.4e-51 205.7 201 58.7
Oeu013422.3 Olea europaea HOM05D006993 ORTHO05D008336 3.4e-51 205.7 205 58.0
Oeu049571.1 Olea europaea HOM05D006993 ORTHO05D008336 5.8e-51 204.9 203 63.5
GSVIVG01006115001 Vitis vinifera HOM05D006993 ORTHO05D008336 5.8e-51 204.9 161 67.7
Thecc.01G203600 Theobroma cacao HOM05D006993 ORTHO05D008336 7.6e-51 204.5 225 56.9
Lj3g0006688 Lotus japonicus HOM05D006993 ORTHO05D008336 6.5e-50 201.4 215 59.1
DCAR_018599 Daucus carota HOM05D000190 ORTHO05D008336 8.4e-50 201.1 162 71.6
CSS0002802 Camellia sinensis var. sinensis HOM05D006993 ORTHO05D008336 1.4e-49 200.3 209 67.0
Actinidia23138 Actinidia chinensis HOM05D006993 ORTHO05D008336 3.2e-49 199.1 201 56.7
Cc01_g15720 Coffea canephora HOM05D006993 ORTHO05D008336 3.2e-49 199.1 215 60.9
TAR626G0971 Trochodendron aralioides HOM05D006993 ORTHO05D008336 4.2e-49 198.7 161 66.5
Duzib138G1606 Durio zibethinus HOM05D006993 ORTHO05D008336 5.5e-49 198.4 221 60.6
Gohir.A11G146100 Gossypium hirsutum HOM05D006993 ORTHO05D008336 7.1e-49 198.0 213 56.3
Gorai.007G162900 Gossypium raimondii HOM05D006993 ORTHO05D008336 7.1e-49 198.0 213 56.3
QL09p044784 Quercus lobata HOM05D006993 ORTHO05D008336 1.6e-48 196.8 184 60.9
CSS0028614 Camellia sinensis var. sinensis HOM05D006993 ORTHO05D008336 2.1e-48 196.4 209 67.0
TWI18G0796 Tripterygium wilfordii HOM05D006993 ORTHO05D008336 3.5e-48 195.7 211 59.7
CSS0020795 Camellia sinensis var. sinensis HOM05D006993 ORTHO05D008336 1.8e-47 193.4 194 57.2
ATR0751G064 Amborella trichopoda HOM05D006993 ORTHO05D008336 2.3e-47 193.0 157 61.8
MD00G1144800 Malus domestica HOM05D006993 ORTHO05D008336 3.0e-47 192.6 184 58.7
Aqoxy4G02329 Aquilegia oxysepala HOM05D006993 ORTHO05D008336 3.9e-47 192.2 168 67.9
COL.COLO4_19719 Corchorus olitorius HOM05D006993 ORTHO05D008336 3.9e-47 192.2 226 57.5
Duzib211G0651 Durio zibethinus HOM05D006993 ORTHO05D008336 5.1e-47 191.8 116 81.0
CANSAT11G1969 Cannabis sativa HOM05D006993 ORTHO05D008336 6.7e-47 191.4 208 54.3
Medtr8g028100 Medicago truncatula HOM05D006993 ORTHO05D008336 6.7e-47 191.4 215 54.9
FvH4_5g27060 Fragaria vesca HOM05D006993 ORTHO05D008336 8.7e-47 191.0 205 53.2
MD15G1141400 Malus domestica HOM05D006993 ORTHO05D008336 8.7e-47 191.0 114 79.8
Cpa.g.sc8.8 Carica papaya HOM05D006993 ORTHO05D008336 1.5e-46 190.3 204 61.8
Potri.014G172800 Populus trichocarpa HOM05D006993 ORTHO05D008336 1.5e-46 190.3 207 56.5
FAN13G2105 Fragaria x ananassa HOM05D006993 ORTHO05D008336 2.5e-46 189.5 205 62.4
Prupe.5G011000 Prunus persica HOM05D006993 ORTHO05D008336 3.3e-46 189.1 161 60.9
PSO675G6922 Papaver somniferum HOM05D006993 ORTHO05D008336 5.7e-46 188.3 155 59.4
arahy.Tifrunner.gnm1.ann1.RC1IE0 Arachis hypogaea HOM05D006993 ORTHO05D008336 7.4e-46 188.0 220 62.3
TPR.G5057 Trifolium pratense HOM05D006993 ORTHO05D008336 7.4e-46 188.0 215 54.0
Cfa010616 Carpinus fangiana HOM05D006993 ORTHO05D008336 9.6e-46 187.6 157 68.8
CDE03G0427 Ceratophyllum demersum HOM05D006993 ORTHO05D008336 1.6e-45 186.8 162 64.8
Glyma.16G028500 Glycine max HOM05D006993 ORTHO05D008336 1.6e-45 186.8 214 61.2
Gohir.D07G168900 Gossypium hirsutum HOM05D006993 ORTHO05D008336 2.1e-45 186.4 204 55.4
CSS0001652 Camellia sinensis var. sinensis HOM05D006993 ORTHO05D008336 2.8e-45 186.0 196 57.1
FAN08G3673 Fragaria x ananassa HOM05D006993 ORTHO05D008336 2.8e-45 186.0 205 52.2
Nitab4.5_0009028g0040 Nicotiana tabacum HOM05D006993 ORTHO05D008336 3.7e-45 185.7 173 68.2
FAN18G3928 Fragaria x ananassa HOM05D006993 ORTHO05D008336 4.8e-45 185.3 162 61.7
Ca_23580_v3 Cicer arietinum L. HOM05D006993 ORTHO05D008336 6.3e-45 184.9 215 64.7
Nn1g08444 Nelumbo nucifera HOM05D006993 ORTHO05D008336 8.2e-45 184.5 109 82.6
FAN04G3061 Fragaria x ananassa HOM05D006993 ORTHO05D008336 1.1e-44 184.1 205 61.0
CsaV3_5G035360 Cucumis sativus L. HOM05D006993 ORTHO05D008336 1.8e-44 183.3 200 53.0
Peaxi162Scf12724g00016 Petunia axillaris HOM05D006993 ORTHO05D008336 1.8e-44 183.3 218 58.7
Rhsim13G0056200 Rhododendron simsii HOM05D006570 ORTHO05D008193 2.4e-44 183.0 162 71.6
CDE06G2320 Ceratophyllum demersum HOM05D006993 ORTHO05D008336 3.1e-44 182.6 162 61.1
Lalb_Chr17g0342261 Lupinus albus HOM05D006993 ORTHO05D008336 4.1e-44 182.2 217 50.7
MBI15_g35689_MAGBIO Magnolia biondii HOM05D006993 ORTHO05D008336 4.1e-44 182.2 116 76.7
RcHm_v2.0_Chr7g0218061 Rosa chinensis HOM05D006993 ORTHO05D008336 5.3e-44 181.8 197 62.9
PSO541G2665 Papaver somniferum HOM05D006993 ORTHO05D008336 6.9e-44 181.4 162 56.2
Potri.002G217400 Populus trichocarpa HOM05D006993 ORTHO05D008336 9.0e-44 181.0 201 56.7
VMungo0331G1491 Vigna mungo HOM05D006993 ORTHO05D008336 9.0e-44 181.0 217 59.4
Gorai.N000700 Gossypium raimondii HOM05D006993 ORTHO05D008336 1.2e-43 180.6 110 80.0
Lj2A1109T68 Lonicera japonica HOM05D006993 ORTHO05D008336 1.5e-43 180.3 116 74.1
Sabra14G0132300 Salix brachista HOM05D006993 ORTHO05D008336 1.5e-43 180.3 207 53.6
Solyc09g018890.3 Solanum lycopersicum HOM05D006993 ORTHO05D008336 1.5e-43 180.3 200 54.0
Sopen09g012650 Solanum pennellii HOM05D006993 ORTHO05D008336 1.5e-43 180.3 200 57.5
Aa31sc249G30 Aethionema arabicum HOM05D006993 ORTHO05D008336 5.9e-43 178.3 206 52.4
Sed0005772 Sechium edule HOM05D006993 ORTHO05D008336 1.0e-42 177.6 186 54.8
MSTRG.18520 Avicennia marina HOM05D006993 ORTHO05D008336 1.3e-42 177.2 203 52.2
Migut.D00756 Erythranthe guttata HOM05D006993 ORTHO05D008336 1.3e-42 177.2 196 52.6
PGSC0003DMG400020288 Solanum tuberosum HOM05D006993 ORTHO05D008336 1.3e-42 177.2 209 59.8
Sp3g23040 Schrenkiella parvula HOM05D006993 ORTHO05D008336 1.7e-42 176.8 112 73.2
vmacro02850 Vaccinium macrocarpon HOM05D006993 ORTHO05D008336 1.7e-42 176.8 200 51.0
BcaB06g26751 Brassica carinata HOM05D006993 ORTHO05D008336 2.9e-42 176.0 112 74.1
CAN.G3.14 Capsicum annuum HOM05D006993 ORTHO05D008336 2.9e-42 176.0 212 61.8
CARHR101970 Cardamine hirsuta HOM05D006993 ORTHO05D008336 3.8e-42 175.6 112 74.1
Thhalv10002670m.g Eutrema salsugineum HOM05D006993 ORTHO05D008336 3.8e-42 175.6 112 73.2
Glyma.07G059600 Glycine max HOM05D006993 ORTHO05D008336 3.8e-42 175.6 218 56.4
MELO3C012348.2 Cucumis melo HOM05D006993 ORTHO05D008336 5.0e-42 175.3 200 52.5
Lsat_1_v5_gn_9_15700 Lactuca sativa HOM05D006993 ORTHO05D008336 1.1e-41 174.1 177 52.5
AT2G04039 Arabidopsis thaliana HOM05D006993 ORTHO05D008336 1.9e-41 173.3 112 74.1
Duzib133G0497 Durio zibethinus HOM05D006993 ORTHO05D008336 9.3e-41 171.0 108 77.8
A07p06910 Brassica napus HOM05D006993 ORTHO05D008336 1.6e-40 170.2 194 51.0
BraA07t28482Z Brassica rapa HOM05D006993 ORTHO05D008336 1.6e-40 170.2 194 51.0
Phvul.010G110000 Phaseolus vulgaris HOM05D006993 ORTHO05D008336 1.6e-40 170.2 212 58.0
AUR62028621 Chenopodium quinoa HOM05D006993 ORTHO05D008336 2.1e-40 169.9 169 60.4
AL3G41710 Arabidopsis lyrata HOM05D006993 ORTHO05D008336 2.7e-40 169.5 202 51.0
BcaC06g35821 Brassica carinata HOM05D006993 ORTHO05D008336 2.7e-40 169.5 195 50.3
BolC7t41517H Brassica oleracea HOM05D006993 ORTHO05D008336 2.7e-40 169.5 195 50.3
Zm00001eb327210 Zea mays HOM05D006993 ORTHO05D008336 3.6e-40 169.1 169 57.4
C07p10500 Brassica napus HOM05D006993 ORTHO05D008336 4.6e-40 168.7 195 50.3
EL10Ac5g10566 Beta vulgaris HOM05D006993 ORTHO05D008336 7.9e-40 167.9 190 56.3
AUR62008046 Chenopodium quinoa HOM05D006993 ORTHO05D008336 1.0e-39 167.5 153 63.4
Zm00001eb108910 Zea mays HOM05D006993 ORTHO05D008336 1.3e-39 167.2 171 50.9
Carub.0003s2586 Capsella rubella HOM05D006993 ORTHO05D008336 2.3e-39 166.4 106 76.4
Os07g0607800 Oryza sativa ssp. japonica HOM05D006993 ORTHO05D008336 3.0e-39 166.0 106 68.9
SalBow2G0576 Salvia bowleyana HOM05D006993 ORTHO05D008336 3.0e-39 166.0 114 69.3
HanXRQChr08g0230791 Helianthus annuus HOM05D006993 ORTHO05D008336 1.1e-38 164.1 116 68.1
ECA247G3631 Erigeron canadensis HOM05D006993 ORTHO05D008336 5.7e-38 161.8 112 69.6
unitig_736.g22974 Utricularia gibba HOM05D006993 ORTHO05D008336 1.1e-36 157.5 113 68.1
Gohir.A07G162350 Gossypium hirsutum HOM05D006993 ORTHO05D008336 4.5e-35 152.1 116 68.1
SalBow6G6587 Salvia bowleyana HOM05D006993 ORTHO05D008336 5.5e-33 145.2 103 68.0
arahy.Tifrunner.gnm1.ann1.6DX8AG Arachis hypogaea HOM05D006993 ORTHO05D008336 7.2e-33 144.8 88 79.5
Nitab4.5_0005967g0020 Nicotiana tabacum HOM05D006993 ORTHO05D008336 3.6e-32 142.5 213 52.1
Ah.11g050660 Amaranthus hybridus HOM05D006993 ORTHO05D008336 4.6e-32 142.1 238 45.8
TWI36G0749 Tripterygium wilfordii HOM05D006993 ORTHO05D008336 4.6e-32 142.1 116 64.7
SalBow2G2967 Salvia bowleyana HOM05D006993 ORTHO05D008336 7.4e-30 134.8 205 44.9
ClCG05G021810 Citrullus lanatus HOM05D006993 ORTHO05D008336 2.6e-27 126.3 116 58.6
AagrBONN_evm.TU.Sc2ySwM_344.1609 Anthoceros agrestis HOM05D006993 ORTHO05D008336 2.1e-24 116.7 112 48.2
Pp3c2_17900 Physcomitrium patens HOM05D006993 ORTHO05D008336 2.3e-23 113.2 110 48.2
SMO111G0038 Selaginella moellendorffii HOM05D006993 ORTHO05D008336 2.0e-22 110.2 101 49.5
Mapoly0043s0057 Marchantia polymorpha HOM05D006993 ORTHO05D008336 3.3e-22 109.4 111 47.7
Psat4g158880 Pisum sativum HOM05D006993 ORTHO05D008336 3.5e-19 99.4 168 43.5
Ca_23571_v3 Cicer arietinum L. HOM05D006993 ORTHO05D008336 1.1e-17 94.4 164 59.1
CBR_g51823 Chara braunii HOM05D006993 ORTHO05D008336 1.7e-13 80.5 72 52.8
Haze_03547 Corylus avellana HOM05D006993 ORTHO05D008336 2.5e-09 66.6 147 47.6
Gohir.D11G152300 Gossypium hirsutum HOM05D006993 ORTHO05D008336 1.6e-08 63.9 142 39.4
THA.LOC104815380 Tarenaya hassleriana HOM05D006993 ORTHO05D008336 3.4e-06 56.2 143 49.0


User provided reference genes

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