Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.H00663 Eucalyptus grandis HOM05D006666 ORTHO05D008276 2.2e-106 389.0 201 100.0
Haze_18405 Corylus avellana HOM05D006666 ORTHO05D008276 3.9e-31 139.0 110 68.2
Cfa017808 Carpinus fangiana HOM05D006666 ORTHO05D008276 2.5e-30 136.3 82 81.7
PGR083G1370 Punica granatum HOM05D006666 ORTHO05D008276 9.5e-30 134.4 154 55.2
PSO063G5885 Papaver somniferum HOM05D006666 ORTHO05D008276 6.2e-29 131.7 89 73.0
PSO782G1773 Papaver somniferum HOM05D006666 ORTHO05D008276 6.2e-29 131.7 89 73.0
TAR629G2781 Trochodendron aralioides HOM05D006666 ORTHO05D008276 1.1e-28 131.0 112 66.1
RcHm_v2.0_Chr7g0176901 Rosa chinensis HOM05D006666 ORTHO05D008276 6.8e-28 128.3 121 60.3
Prupe.5G245400 Prunus persica HOM05D006666 ORTHO05D008276 8.9e-28 127.9 89 74.2
Ah.15g090740 Amaranthus hybridus HOM05D006666 ORTHO05D008276 1.2e-27 127.5 80 72.5
CSS0032824 Camellia sinensis var. sinensis HOM05D006666 ORTHO05D008276 2.0e-27 126.7 80 76.2
Dinv09758 Davidia involucrata HOM05D006666 ORTHO05D008276 2.6e-27 126.3 95 67.4
CiPaw.16G075700 Carya illinoinensis HOM05D006666 ORTHO05D008276 3.4e-27 125.9 92 69.6
Glyma.20G216200 Glycine max HOM05D006666 ORTHO05D008276 3.4e-27 125.9 134 53.0
FvH4_5g18600 Fragaria vesca HOM05D006666 ORTHO05D008276 7.6e-27 124.8 110 62.7
FAN18G1406 Fragaria x ananassa HOM05D006666 ORTHO05D008276 7.6e-27 124.8 110 62.7
VMungo0720G1342 Vigna mungo HOM05D006666 ORTHO05D008276 7.6e-27 124.8 90 68.9
Glyma.10G174200 Glycine max HOM05D006666 ORTHO05D008276 2.2e-26 123.2 95 65.3
FAN13G2387 Fragaria x ananassa HOM05D006666 ORTHO05D008276 3.8e-26 122.5 110 61.8
MBI06_g22566_MAGBIO Magnolia biondii HOM05D006666 ORTHO05D008276 6.4e-26 121.7 105 61.9
AUR62037011 Chenopodium quinoa HOM05D006666 ORTHO05D008276 8.4e-26 121.3 80 71.2
FAN04G1657 Fragaria x ananassa HOM05D006666 ORTHO05D008276 8.4e-26 121.3 110 60.9
Lj5g0025802 Lotus japonicus HOM05D006666 ORTHO05D008276 1.1e-25 120.9 110 59.1
Sopen03g029740 Solanum pennellii HOM05D006666 ORTHO05D008276 1.1e-25 120.9 138 53.6
EL10Ac7g16891 Beta vulgaris HOM05D006666 ORTHO05D008276 1.9e-25 120.2 113 55.8
Ciclev10023646m.g Citrus clementina HOM05D006666 ORTHO05D008276 2.4e-25 119.8 90 67.8
FAN08G1977 Fragaria x ananassa HOM05D006666 ORTHO05D008276 2.4e-25 119.8 89 69.7
Lalb_Chr21g0311701 Lupinus albus HOM05D006666 ORTHO05D008276 2.4e-25 119.8 139 49.6
MD06G1241100 Malus domestica HOM05D006666 ORTHO05D008276 2.4e-25 119.8 132 53.8
Phvul.L006501 Phaseolus vulgaris HOM05D006666 ORTHO05D008276 2.4e-25 119.8 134 53.0
MD14G1247300 Malus domestica HOM05D006666 ORTHO05D008276 3.2e-25 119.4 82 70.7
PGSC0003DMG400015210 Solanum tuberosum HOM05D006666 ORTHO05D008276 4.2e-25 119.0 105 61.9
AUR62006207 Chenopodium quinoa HOM05D006666 ORTHO05D008276 5.4e-25 118.6 80 70.0
TWI81G0077 Tripterygium wilfordii HOM05D006666 ORTHO05D008276 5.4e-25 118.6 80 72.5
Atru.chr9.23 Acer truncatum HOM05D006666 ORTHO05D008276 7.1e-25 118.2 82 70.7
Ca_09926_v3 Cicer arietinum L. HOM05D006666 ORTHO05D008276 9.2e-25 117.9 107 59.8
Nitab4.5_0009307g0050 Nicotiana tabacum HOM05D006666 ORTHO05D008276 9.2e-25 117.9 105 61.9
Solyc03g019880.3 Solanum lycopersicum HOM05D006666 ORTHO05D008276 2.1e-24 116.7 105 61.0
THA.LOC104812606 Tarenaya hassleriana HOM05D006666 ORTHO05D008276 2.1e-24 116.7 130 53.1
MSTRG.11567 Avicennia marina HOM05D006666 ORTHO05D008276 3.5e-24 115.9 135 52.6
Hund06740 Selenicereus undatus HOM05D006666 ORTHO05D008276 3.5e-24 115.9 133 52.6
CAN.G861.22 Capsicum annuum HOM05D006666 ORTHO05D008276 6.0e-24 115.2 105 57.1
GSVIVG01024243001 Vitis vinifera HOM05D006666 ORTHO05D008276 6.0e-24 115.2 85 71.8
Os04g0528100 Oryza sativa ssp. japonica HOM05D006666 ORTHO05D008276 7.8e-24 114.8 140 52.1
Potri.004G066900 Populus trichocarpa HOM05D006666 ORTHO05D008276 1.0e-23 114.4 75 76.0
MELO3C001965.2 Cucumis melo HOM05D006666 ORTHO05D008276 1.3e-23 114.0 116 54.3
Nn4g25066 Nelumbo nucifera HOM05D006666 ORTHO05D008276 1.3e-23 114.0 84 65.5
vmacro17828 Vaccinium macrocarpon HOM05D006666 ORTHO05D008276 1.3e-23 114.0 80 72.5
Sc10g0008660 Simmondsia chinensis HOM05D006666 ORTHO05D008276 2.3e-23 113.2 135 51.9
TPR.G8870 Trifolium pratense HOM05D006666 ORTHO05D008276 3.9e-23 112.5 80 68.8
Actinidia02653 Actinidia chinensis HOM05D006666 ORTHO05D008276 5.1e-23 112.1 80 71.2
CARHR027620 Cardamine hirsuta HOM05D006666 ORTHO05D008276 5.1e-23 112.1 79 70.9
Medtr1g077550 Medicago truncatula HOM05D006666 ORTHO05D008276 5.1e-23 112.1 137 51.8
Nitab4.5_0008182g0010 Nicotiana tabacum HOM05D006666 ORTHO05D008276 5.1e-23 112.1 83 69.9
AT1G28150 Arabidopsis thaliana HOM05D006666 ORTHO05D008276 6.6e-23 111.7 75 70.7
Hma1.2p1_0816F.1_g222970 Hydrangea macrophylla HOM05D006666 ORTHO05D008276 6.6e-23 111.7 82 69.5
Thecc.03G072200 Theobroma cacao HOM05D006666 ORTHO05D008276 8.7e-23 111.3 80 71.2
Lsat_1_v5_gn_8_1660 Lactuca sativa HOM05D006666 ORTHO05D008276 1.1e-22 110.9 86 65.1
AL1G41680 Arabidopsis lyrata HOM05D006666 ORTHO05D008276 1.5e-22 110.5 75 69.3
ClCG04G012450 Citrullus lanatus HOM05D006666 ORTHO05D008276 1.5e-22 110.5 116 51.7
Peaxi162Scf00171g00030 Petunia axillaris HOM05D006666 ORTHO05D008276 1.5e-22 110.5 83 66.3
Psat6g054440 Pisum sativum HOM05D006666 ORTHO05D008276 1.5e-22 110.5 144 52.8
CDE06G1954 Ceratophyllum demersum HOM05D006666 ORTHO05D008276 1.9e-22 110.2 102 55.9
SalBow5G0154 Salvia bowleyana HOM05D006666 ORTHO05D008276 1.9e-22 110.2 83 69.9
Sp1g24340 Schrenkiella parvula HOM05D006666 ORTHO05D008276 1.9e-22 110.2 75 70.7
SGA_v2.0_scaffold25G10726 Striga asiatica HOM05D006666 ORTHO05D008276 1.9e-22 110.2 104 58.7
BcaC05g26820 Brassica carinata HOM05D006666 ORTHO05D008276 2.5e-22 109.8 76 72.4
C05p26900 Brassica napus HOM05D006666 ORTHO05D008276 2.5e-22 109.8 76 72.4
BolC5t31408H Brassica oleracea HOM05D006666 ORTHO05D008276 2.5e-22 109.8 76 72.4
Cc00_g07700 Coffea canephora HOM05D006666 ORTHO05D008276 2.5e-22 109.8 137 50.4
ATR0124G047 Amborella trichopoda HOM05D006666 ORTHO05D008276 3.3e-22 109.4 76 72.4
HPP92_021068 Vanilla planifolia HOM05D006666 ORTHO05D008276 3.3e-22 109.4 108 61.1
Manes.02G219900 Manihot esculenta HOM05D006666 ORTHO05D008276 4.3e-22 109.0 75 72.0
Duzib205G1681 Durio zibethinus HOM05D006666 ORTHO05D008276 5.6e-22 108.6 80 68.8
Thhalv10009115m.g Eutrema salsugineum HOM05D006666 ORTHO05D008276 5.6e-22 108.6 76 69.7
Carub.0001s2658 Capsella rubella HOM05D006666 ORTHO05D008276 7.3e-22 108.2 115 50.4
Gohir.A07G062700 Gossypium hirsutum HOM05D006666 ORTHO05D008276 9.6e-22 107.8 80 67.5
Gorai.001G070900 Gossypium raimondii HOM05D006666 ORTHO05D008276 9.6e-22 107.8 80 67.5
Sed0024015 Sechium edule HOM05D006666 ORTHO05D008276 9.6e-22 107.8 82 64.6
BcaC06g35338 Brassica carinata HOM05D006666 ORTHO05D008276 1.6e-21 107.1 79 64.6
C07p17240 Brassica napus HOM05D006666 ORTHO05D008276 1.6e-21 107.1 79 64.6
BolC7t42228H Brassica oleracea HOM05D006666 ORTHO05D008276 1.6e-21 107.1 79 64.6
BraA09t39302Z Brassica rapa HOM05D006666 ORTHO05D008276 1.6e-21 107.1 76 71.1
BraA07t28933Z Brassica rapa HOM05D006666 ORTHO05D008276 2.1e-21 106.7 75 66.7
Rhsim08G0006200 Rhododendron simsii HOM05D006666 ORTHO05D008276 2.8e-21 106.3 73 75.3
A07p11450 Brassica napus HOM05D006666 ORTHO05D008276 3.6e-21 105.9 75 66.7
Migut.O00284 Erythranthe guttata HOM05D006666 ORTHO05D008276 3.6e-21 105.9 81 69.1
HanXRQChr05g0141151 Helianthus annuus HOM05D006666 ORTHO05D008276 3.6e-21 105.9 80 67.5
Aa31sc45G80 Aethionema arabicum HOM05D006666 ORTHO05D008276 4.7e-21 105.5 75 70.7
A09p37900 Brassica napus HOM05D006666 ORTHO05D008276 4.7e-21 105.5 76 69.7
CDE04G3444 Ceratophyllum demersum HOM05D006666 ORTHO05D008276 6.2e-21 105.1 91 60.4
BcaB03g13950 Brassica carinata HOM05D006666 ORTHO05D008276 1.1e-20 104.4 75 66.7
Gohir.D07G067300 Gossypium hirsutum HOM05D006666 ORTHO05D008276 1.1e-20 104.4 80 66.2
SalBow1G4610 Salvia bowleyana HOM05D006666 ORTHO05D008276 1.1e-20 104.4 76 69.7
CsaV3_1G005250 Cucumis sativus L. HOM05D006666 ORTHO05D008276 1.8e-20 103.6 91 58.2
ECA233G5286 Erigeron canadensis HOM05D006666 ORTHO05D008276 3.1e-20 102.8 73 68.5
arahy.Tifrunner.gnm1.ann1.UGS5Z8 Arachis hypogaea HOM05D006666 ORTHO05D008276 1.5e-19 100.5 145 46.2
SEGI_19522 Sequoiadendron giganteum HOM05D006666 ORTHO05D008276 2.6e-19 99.8 85 57.6
DCAR_011403 Daucus carota HOM05D006666 ORTHO05D008276 5.8e-19 98.6 80 58.8
unitig_749.g13724 Utricularia gibba HOM05D006666 ORTHO05D008276 9.9e-19 97.8 133 48.1
Sabra04G0044800 Salix brachista HOM05D006666 ORTHO05D008276 6.4e-18 95.1 64 75.0
Sabra11G0106200 Salix brachista HOM05D006666 ORTHO05D008276 6.4e-18 95.1 64 75.0
Sabra17G0092500 Salix brachista HOM05D006666 ORTHO05D008276 6.4e-18 95.1 64 75.0
QL10p036089 Quercus lobata HOM05D006666 ORTHO05D008276 1.1e-17 94.4 71 64.8
COL.COLO4_25502 Corchorus olitorius HOM05D006666 ORTHO05D008276 1.4e-17 94.0 61 80.3
Aqoxy3G04334 Aquilegia oxysepala HOM05D006666 ORTHO05D008276 5.4e-17 92.0 91 56.0
QL10p036477 Quercus lobata HOM05D006666 ORTHO05D008276 9.3e-17 91.3 61 68.9
AagrBONN_evm.TU.Sc2ySwM_344.686 Anthoceros agrestis HOM05D006666 ORTHO05D008276 1.6e-16 90.5 84 58.3
Mapoly0096s0047 Marchantia polymorpha HOM05D006666 ORTHO05D008276 2.3e-15 86.7 76 53.9
Oeu038394.2 Olea europaea HOM05D006666 ORTHO05D008276 3.0e-15 86.3 64 70.3
Pp3c19_21970 Physcomitrium patens HOM05D006666 ORTHO05D008276 1.1e-14 84.3 74 50.0
SMO143G0007 Selaginella moellendorffii HOM05D006666 ORTHO05D008276 5.6e-14 82.0 78 50.0
COL.COLO4_37022 Corchorus olitorius HOM05D006666 ORTHO05D008276 4.0e-12 75.9 53 77.4
Hma1.2p1_0816F.1_g222980 Hydrangea macrophylla HOM05D006666 ORTHO05D008276 3.8e-10 69.3 58 63.8
MCO08G267 Micromonas commoda HOM05D006666 ORTHO05D008276 4.9e-10 68.9 74 50.0
PRCOL_00004364 Prasinoderma coloniale HOM05D006666 ORTHO05D008276 1.6e-08 63.9 47 55.3
Cre03.g203800 Chlamydomonas reinhardtii HOM05D006666 ORTHO05D008276 1.9e-06 57.0 43 53.5


User provided reference genes

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