Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.H00565 Eucalyptus grandis HOM05D007316 ORTHO05D009393 3.7e-111 404.8 196 100.0
QL09p023249 Quercus lobata HOM05D007316 ORTHO05D009393 1.5e-24 117.1 90 66.7
QL09p015786 Quercus lobata HOM05D007316 ORTHO05D009393 4.5e-24 115.5 63 82.5
THA.LOC104813939 Tarenaya hassleriana HOM05D007316 ORTHO05D009393 5.8e-24 115.2 64 82.8
QL02p030600 Quercus lobata HOM05D007316 ORTHO05D009393 1.0e-23 114.4 63 82.5
Manes.17G057300 Manihot esculenta HOM05D007316 ORTHO05D009393 4.9e-23 112.1 64 79.7
Hma1.2p1_0157F.1_g069460 Hydrangea macrophylla HOM05D007316 ORTHO05D009393 6.5e-23 111.7 64 82.8
GSVIVG01029768001 Vitis vinifera HOM05D007316 ORTHO05D009393 6.5e-23 111.7 64 81.2
Sp5g28140 Schrenkiella parvula HOM05D007316 ORTHO05D009393 8.4e-23 111.3 64 78.1
A07p29930 Brassica napus HOM05D007316 ORTHO05D009393 1.1e-22 110.9 64 78.1
C06p34200 Brassica napus HOM05D007316 ORTHO05D009393 1.1e-22 110.9 64 78.1
BolC6t38541H Brassica oleracea HOM05D007316 ORTHO05D009393 1.1e-22 110.9 64 78.1
BraA07t30632Z Brassica rapa HOM05D007316 ORTHO05D009393 1.1e-22 110.9 64 78.1
Duzib128G0483 Durio zibethinus HOM05D007316 ORTHO05D009393 1.1e-22 110.9 64 78.1
Duzib106G1284 Durio zibethinus HOM05D007316 ORTHO05D009393 1.9e-22 110.2 64 78.1
Aa31LG4G3460 Aethionema arabicum HOM05D007316 ORTHO05D009393 2.5e-22 109.8 64 78.1
Thecc.05G261200 Theobroma cacao HOM05D007316 ORTHO05D009393 4.2e-22 109.0 64 78.1
Phvul.001G220400 Phaseolus vulgaris HOM05D007316 ORTHO05D009393 5.5e-22 108.6 64 78.1
RcHm_v2.0_Chr4g0387941 Rosa chinensis HOM05D007316 ORTHO05D009393 5.5e-22 108.6 64 73.4
Ciclev10023234m.g Citrus clementina HOM05D007316 ORTHO05D009393 7.1e-22 108.2 64 79.7
Gohir.D13G105800 Gossypium hirsutum HOM05D007316 ORTHO05D009393 1.2e-21 107.5 64 76.6
Potri.004G058400 Populus trichocarpa HOM05D007316 ORTHO05D009393 1.6e-21 107.1 64 78.1
RcHm_v2.0_Chr4g0385941 Rosa chinensis HOM05D007316 ORTHO05D009393 1.6e-21 107.1 64 71.9
Ca_09261_v3 Cicer arietinum L. HOM05D007316 ORTHO05D009393 2.1e-21 106.7 64 76.6
Potri.011G067800 Populus trichocarpa HOM05D007316 ORTHO05D009393 2.1e-21 106.7 64 76.6
RcHm_v2.0_Chr4g0387841 Rosa chinensis HOM05D007316 ORTHO05D009393 2.1e-21 106.7 64 71.9
FvH4_4g00490 Fragaria vesca HOM05D007316 ORTHO05D009393 2.7e-21 106.3 64 71.9
FAN12G3999 Fragaria x ananassa HOM05D007316 ORTHO05D009393 2.7e-21 106.3 64 71.9
FAN17G1024 Fragaria x ananassa HOM05D007316 ORTHO05D009393 2.7e-21 106.3 64 71.9
FAN22G1131 Fragaria x ananassa HOM05D007316 ORTHO05D009393 2.7e-21 106.3 64 71.9
AL2G32940 Arabidopsis lyrata HOM05D007316 ORTHO05D009393 3.5e-21 105.9 64 75.0
AT1G73177 Arabidopsis thaliana HOM05D007316 ORTHO05D009393 3.5e-21 105.9 64 75.0
CSS0015421 Camellia sinensis var. sinensis HOM05D007316 ORTHO05D009393 3.5e-21 105.9 62 75.8
Glyma.19G223500 Glycine max HOM05D007316 ORTHO05D009393 4.6e-21 105.5 64 76.6
CARHR066170 Cardamine hirsuta HOM05D007316 ORTHO05D009393 6.0e-21 105.1 64 75.0
CSS0014503 Camellia sinensis var. sinensis HOM05D007316 ORTHO05D009393 7.9e-21 104.8 62 74.2
CSS0021979 Camellia sinensis var. sinensis HOM05D007316 ORTHO05D009393 7.9e-21 104.8 62 74.2
CsaV3_2G036390 Cucumis sativus L. HOM05D007316 ORTHO05D009393 7.9e-21 104.8 64 78.1
Medtr7g111090 Medicago truncatula HOM05D007316 ORTHO05D009393 1.0e-20 104.4 64 75.0
Sed0015703 Sechium edule HOM05D007316 ORTHO05D009393 1.0e-20 104.4 64 76.6
Carub.0002s1996 Capsella rubella HOM05D007316 ORTHO05D009393 1.3e-20 104.0 64 73.4
CANSAT56G2903 Cannabis sativa HOM05D007316 ORTHO05D009393 1.8e-20 103.6 64 75.0
ClCG09G016900 Citrullus lanatus HOM05D007316 ORTHO05D009393 1.8e-20 103.6 64 76.6
Glyma.03G226500 Glycine max HOM05D007316 ORTHO05D009393 1.8e-20 103.6 64 75.0
Psat3g015560 Pisum sativum HOM05D007316 ORTHO05D009393 1.8e-20 103.6 64 71.9
Atru.chr12.1494 Acer truncatum HOM05D007316 ORTHO05D009393 2.3e-20 103.2 64 78.1
MELO3C021892.2 Cucumis melo HOM05D007316 ORTHO05D009393 2.3e-20 103.2 64 76.6
Cpa.g.sc233.10 Carica papaya HOM05D007316 ORTHO05D009393 3.9e-20 102.4 65 76.9
Peaxi162Scf00071g00128 Petunia axillaris HOM05D007316 ORTHO05D009393 3.9e-20 102.4 61 75.4
Prupe.3G122600 Prunus persica HOM05D007316 ORTHO05D009393 3.9e-20 102.4 64 75.0
Cc02_g36870 Coffea canephora HOM05D007316 ORTHO05D009393 5.1e-20 102.1 65 75.4
PGR119G2118 Punica granatum HOM05D007316 ORTHO05D009393 5.1e-20 102.1 64 76.6
SalBow3G1440 Salvia bowleyana HOM05D007316 ORTHO05D009393 6.7e-20 101.7 64 73.4
arahy.Tifrunner.gnm1.ann1.AE1MMP Arachis hypogaea HOM05D007316 ORTHO05D009393 8.7e-20 101.3 64 71.9
arahy.Tifrunner.gnm1.ann1.CUXT1U Arachis hypogaea HOM05D007316 ORTHO05D009393 8.7e-20 101.3 64 71.9
CSS0022236 Camellia sinensis var. sinensis HOM05D007316 ORTHO05D009393 1.1e-19 100.9 62 74.2
Migut.B00683 Erythranthe guttata HOM05D007316 ORTHO05D009393 1.5e-19 100.5 64 70.3
Migut.B00911 Erythranthe guttata HOM05D007316 ORTHO05D009393 1.5e-19 100.5 64 70.3
BcaC08g45665 Brassica carinata HOM05D007316 ORTHO05D009393 1.9e-19 100.1 79 63.3
Cfa016046 Carpinus fangiana HOM05D007316 ORTHO05D009393 1.9e-19 100.1 64 71.9
Lj1g0006735 Lotus japonicus HOM05D007316 ORTHO05D009393 1.9e-19 100.1 63 68.3
MD09G1239400 Malus domestica HOM05D007316 ORTHO05D009393 2.5e-19 99.8 60 75.0
Sopen08g002530 Solanum pennellii HOM05D007316 ORTHO05D009393 3.3e-19 99.4 62 75.8
HanXRQChr07g0193721 Helianthus annuus HOM05D007316 ORTHO05D009393 4.3e-19 99.0 60 75.0
COL.COLO4_20544 Corchorus olitorius HOM05D007316 ORTHO05D009393 5.7e-19 98.6 65 70.8
PGSC0003DMG400026307 Solanum tuberosum HOM05D007316 ORTHO05D009393 5.7e-19 98.6 62 74.2
TWI23G0494 Tripterygium wilfordii HOM05D007316 ORTHO05D009393 9.7e-19 97.8 64 65.6
Lsat_1_v5_gn_9_84180 Lactuca sativa HOM05D007316 ORTHO05D009393 2.2e-18 96.7 60 71.7
Lalb_Chr04g0260251 Lupinus albus HOM05D007316 ORTHO05D009393 2.8e-18 96.3 62 74.2
Aqoxy7G02856 Aquilegia oxysepala HOM05D007316 ORTHO05D009393 1.4e-17 94.0 66 63.6
Os07g0633800 Oryza sativa ssp. japonica HOM05D007316 ORTHO05D009393 1.9e-14 83.6 70 55.7
ECA236G4186 Erigeron canadensis HOM05D007316 ORTHO05D009393 7.2e-14 81.6 61 62.3
TAR362G0014 Trochodendron aralioides HOM05D007316 ORTHO05D009393 2.7e-13 79.7 43 83.7
CiPaw.05G216300 Carya illinoinensis HOM05D007316 ORTHO05D009393 1.0e-12 77.8 55 67.3
Thhalv10019421m.g Eutrema salsugineum HOM05D007316 ORTHO05D009393 2.3e-12 76.6 59 61.0
GSVIVG01026029001 Vitis vinifera HOM05D007316 ORTHO05D009393 1.5e-11 73.9 44 72.7
Oeu034759.1 Olea europaea HOM05D007316 ORTHO05D009393 5.7e-11 72.0 44 72.7
Nn7g37509 Nelumbo nucifera HOM05D007316 ORTHO05D009393 9.7e-11 71.2 42 73.8
vmacro19806 Vaccinium macrocarpon HOM05D007316 ORTHO05D009393 9.7e-11 71.2 43 76.7
CSS0028514 Camellia sinensis var. sinensis HOM05D007316 ORTHO05D009393 1.3e-10 70.9 47 63.8
CSS0044918 Camellia sinensis var. sinensis HOM05D007316 ORTHO05D009393 1.3e-10 70.9 45 66.7
CSS0047183 Camellia sinensis var. sinensis HOM05D007316 ORTHO05D009393 1.3e-10 70.9 45 66.7
MBI18_g28941_MAGBIO Magnolia biondii HOM05D000032 ORTHO05D004701 1.7e-10 70.5 49 65.3
Gorai.013G118500 Gossypium raimondii HOM05D007316 ORTHO05D009393 2.2e-10 70.1 64 57.8
CSS0008863 Camellia sinensis var. sinensis HOM05D007316 ORTHO05D009393 2.8e-10 69.7 49 63.3
CSS0044079 Camellia sinensis var. sinensis HOM05D007316 ORTHO05D009393 2.8e-10 69.7 49 63.3
Actinidia11709 Actinidia chinensis HOM05D007316 ORTHO05D009393 4.8e-10 68.9 34 88.2
Gohir.A13G102600 Gossypium hirsutum HOM05D007316 ORTHO05D009393 6.3e-10 68.6 64 57.8
CSS0021742 Camellia sinensis var. sinensis HOM05D007316 ORTHO05D009393 8.2e-10 68.2 48 62.5
CSS0047605 Camellia sinensis var. sinensis HOM05D007316 ORTHO05D009393 8.2e-10 68.2 47 61.7
CSS0025187 Camellia sinensis var. sinensis HOM05D007316 ORTHO05D009393 1.1e-09 67.8 45 62.2
Mapoly0010s0075 Marchantia polymorpha HOM05D007316 ORTHO05D009393 1.1e-09 67.8 66 50.0
EL10Ac8g18312 Beta vulgaris HOM05D007316 ORTHO05D009393 2.6e-08 63.2 43 67.4
Ah.09g230190 Amaranthus hybridus HOM05D007316 ORTHO05D009393 7.7e-08 61.6 43 65.1
AUR62021328 Chenopodium quinoa HOM05D007316 ORTHO05D009393 1.0e-07 61.2 43 62.8
Rhsim05G0117300 Rhododendron simsii HOM05D007316 ORTHO05D009393 2.9e-07 59.7 64 51.6
RhsimUnG0015700 Rhododendron simsii HOM05D007316 ORTHO05D009393 2.9e-07 59.7 64 51.6
CAN.G530.4 Capsicum annuum HOM05D007316 ORTHO05D009393 3.8e-07 59.3 38 68.4
MCO03G596 Micromonas commoda HOM05D007316 ORTHO05D009393 8.5e-07 58.2 65 38.5
Solyc08g006570.4 Solanum lycopersicum HOM05D007316 ORTHO05D009393 1.9e-06 57.0 35 71.4
unitig_749.g14119 Utricularia gibba HOM05D007316 ORTHO05D009393 5.5e-06 55.5 75 41.3


User provided reference genes

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