Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.H00332 Eucalyptus grandis HOM05D006282 ORTHO05D007460 1.8e-37 158.7 77 100.0
Eucgr.H00330 Eucalyptus grandis HOM05D006282 ORTHO05D007460 5.0e-19 97.4 78 67.9
Gorai.005G124500 Gossypium raimondii HOM05D006282 ORTHO05D007460 6.5e-11 70.5 70 45.7
Gohir.A02G091500 Gossypium hirsutum HOM05D006282 ORTHO05D007460 1.1e-10 69.7 70 44.3
COL.COLO4_10135 Corchorus olitorius HOM05D006282 ORTHO05D007460 1.4e-10 69.3 70 45.7
Gohir.D02G109100 Gossypium hirsutum HOM05D006282 ORTHO05D007460 3.2e-10 68.2 64 48.4
Atru.chr4.1364 Acer truncatum HOM05D006282 ORTHO05D007460 1.2e-09 66.2 60 55.0
Gohir.D10G124600 Gossypium hirsutum HOM05D006282 ORTHO05D007460 1.2e-09 66.2 70 47.1
Gorai.011G137700 Gossypium raimondii HOM05D006282 ORTHO05D007460 1.2e-09 66.2 70 47.1
Rhsim02G0083100 Rhododendron simsii HOM05D006282 ORTHO05D007460 1.2e-09 66.2 60 56.7
Ciclev10023163m.g Citrus clementina HOM05D006282 ORTHO05D007460 1.6e-09 65.9 72 45.8
Manes.04G048673 Manihot esculenta HOM05D006282 ORTHO05D007460 1.6e-09 65.9 67 55.2
Thecc.04G169400 Theobroma cacao HOM05D006282 ORTHO05D007460 1.6e-09 65.9 67 49.3
Gohir.A10G141900 Gossypium hirsutum HOM05D006282 ORTHO05D007460 2.1e-09 65.5 70 45.7
Manes.04G046449 Manihot esculenta HOM05D006282 ORTHO05D007460 3.6e-09 64.7 67 53.7
Ciclev10023861m.g Citrus clementina HOM05D006282 ORTHO05D007460 6.1e-09 63.9 72 45.8
CiPaw.01G172200 Carya illinoinensis HOM05D006282 ORTHO05D007460 7.9e-09 63.5 77 45.5
CiPaw.01G172100 Carya illinoinensis HOM05D006282 ORTHO05D007460 1.4e-08 62.8 77 45.5
CiPaw.01G172600 Carya illinoinensis HOM05D006282 ORTHO05D007460 2.3e-08 62.0 77 45.5
Nn1g09678 Nelumbo nucifera HOM05D006282 ORTHO05D007460 2.3e-08 62.0 69 49.3
Manes.11G128100 Manihot esculenta HOM05D006282 ORTHO05D007460 3.9e-08 61.2 67 46.3
Thecc.04G169300 Theobroma cacao HOM05D006282 ORTHO05D007460 3.9e-08 61.2 70 45.7
Prupe.1G203400 Prunus persica HOM05D006282 ORTHO05D007460 5.1e-08 60.8 68 44.1
QL10p053002 Quercus lobata HOM05D006282 ORTHO05D007460 1.1e-07 59.7 66 43.9
CiPaw.01G172500 Carya illinoinensis HOM05D006282 ORTHO05D007460 3.3e-07 58.2 77 42.9
QL10p052968 Quercus lobata HOM05D006282 ORTHO05D007460 3.3e-07 58.2 66 43.9
Manes.04G047561 Manihot esculenta HOM05D006282 ORTHO05D007460 4.4e-07 57.8 67 47.8
Cfa015245 Carpinus fangiana HOM05D006282 ORTHO05D007460 7.4e-07 57.0 77 42.9
ClCG07G015130 Citrullus lanatus HOM05D002360 ORTHO05D006971 7.4e-07 57.0 70 44.3
MELO3C017773.2 Cucumis melo HOM05D006282 ORTHO05D007460 7.4e-07 57.0 70 45.7
Cfa015244 Carpinus fangiana HOM05D006282 ORTHO05D007460 9.7e-07 56.6 67 47.8
QL10p052996 Quercus lobata HOM05D006282 ORTHO05D007460 9.7e-07 56.6 66 42.4
Cfa015249 Carpinus fangiana HOM05D006282 ORTHO05D007460 1.3e-06 56.2 67 47.8
Cfa015251 Carpinus fangiana HOM05D006282 ORTHO05D007460 1.3e-06 56.2 78 46.2
CiPaw.05G255000 Carya illinoinensis HOM05D006282 ORTHO05D007460 1.7e-06 55.8 66 47.0
Hma1.2p1_0324F.1_g125760 Hydrangea macrophylla HOM05D006282 ORTHO05D007460 1.7e-06 55.8 67 43.3
QL10p052979 Quercus lobata HOM05D006282 ORTHO05D007460 1.7e-06 55.8 66 42.4
TAR362G0908 Trochodendron aralioides HOM05D006282 ORTHO05D007460 1.7e-06 55.8 61 47.5
Cfa015231 Carpinus fangiana HOM05D006282 ORTHO05D007460 2.2e-06 55.5 67 49.3
CsaV3_4G002680 Cucumis sativus L. HOM05D006282 ORTHO05D007460 2.2e-06 55.5 68 45.6
Cfa015252 Carpinus fangiana HOM05D006282 ORTHO05D007460 2.8e-06 55.1 67 46.3
CiPaw.01G033300 Carya illinoinensis HOM05D006282 ORTHO05D007460 2.8e-06 55.1 66 47.0
Glyma.11G124700 Glycine max HOM05D006282 ORTHO05D007460 2.8e-06 55.1 71 42.3
Glyma.12G049300 Glycine max HOM05D006282 ORTHO05D007460 2.8e-06 55.1 70 44.3
Hma1.2p1_0807F.1_g221500 Hydrangea macrophylla HOM05D006282 ORTHO05D007460 3.7e-06 54.7 67 43.3
Manes.04G045337 Manihot esculenta HOM05D006282 ORTHO05D007460 3.7e-06 54.7 66 48.5
QL10p053038 Quercus lobata HOM05D006282 ORTHO05D007460 3.7e-06 54.7 66 42.4
QL10p053061 Quercus lobata HOM05D006282 ORTHO05D007460 3.7e-06 54.7 68 42.6
TWI63G0935 Tripterygium wilfordii HOM05D006282 ORTHO05D007460 3.7e-06 54.7 79 41.8
CiPaw.01G201300 Carya illinoinensis HOM05D006282 ORTHO05D007460 6.3e-06 53.9 66 47.0
Prupe.1G203300 Prunus persica HOM05D006282 ORTHO05D007460 6.3e-06 53.9 74 41.9
Hma1.2p1_3261F.1_g334650 Hydrangea macrophylla HOM05D006282 ORTHO05D007460 8.2e-06 53.5 67 44.8


User provided reference genes

Program Settings