Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.H00330 Eucalyptus grandis HOM05D006282 ORTHO05D007460 4.2e-34 147.5 78 100.0
Eucgr.H00332 Eucalyptus grandis HOM05D006282 ORTHO05D007460 3.3e-18 94.7 78 67.9
COL.COLO4_10135 Corchorus olitorius HOM05D006282 ORTHO05D007460 4.6e-12 74.3 71 53.5
CiPaw.01G172100 Carya illinoinensis HOM05D006282 ORTHO05D007460 2.9e-11 71.6 77 50.6
CiPaw.01G172600 Carya illinoinensis HOM05D006282 ORTHO05D007460 2.9e-11 71.6 77 51.9
Gorai.005G124500 Gossypium raimondii HOM05D006282 ORTHO05D007460 6.6e-11 70.5 71 52.1
CiPaw.01G172200 Carya illinoinensis HOM05D006282 ORTHO05D007460 8.6e-11 70.1 77 49.4
Hma1.2p1_0324F.1_g125760 Hydrangea macrophylla HOM05D006282 ORTHO05D007460 8.6e-11 70.1 68 51.5
Gohir.A02G091500 Gossypium hirsutum HOM05D006282 ORTHO05D007460 1.1e-10 69.7 71 50.7
Manes.11G128100 Manihot esculenta HOM05D006282 ORTHO05D007460 1.1e-10 69.7 68 54.4
Thecc.04G169300 Theobroma cacao HOM05D006282 ORTHO05D007460 1.1e-10 69.7 71 50.7
Gohir.D02G109100 Gossypium hirsutum HOM05D006282 ORTHO05D007460 1.5e-10 69.3 71 53.5
Hma1.2p1_0807F.1_g221500 Hydrangea macrophylla HOM05D006282 ORTHO05D007460 1.9e-10 68.9 68 51.5
Thecc.04G169400 Theobroma cacao HOM05D006282 ORTHO05D007460 1.9e-10 68.9 68 54.4
CiPaw.01G172500 Carya illinoinensis HOM05D006282 ORTHO05D007460 4.3e-10 67.8 77 49.4
Nn1g09678 Nelumbo nucifera HOM05D006282 ORTHO05D007460 5.6e-10 67.4 70 54.3
Ciclev10023163m.g Citrus clementina HOM05D006282 ORTHO05D007460 2.1e-09 65.5 72 47.2
Gohir.D10G124600 Gossypium hirsutum HOM05D006282 ORTHO05D007460 2.8e-09 65.1 71 47.9
Gorai.011G137700 Gossypium raimondii HOM05D006282 ORTHO05D007460 2.8e-09 65.1 71 47.9
Atru.chr4.1364 Acer truncatum HOM05D006282 ORTHO05D007460 4.7e-09 64.3 61 57.4
Gohir.A10G141900 Gossypium hirsutum HOM05D006282 ORTHO05D007460 4.7e-09 64.3 71 46.5
Hma1.2p1_3261F.1_g334650 Hydrangea macrophylla HOM05D006282 ORTHO05D007460 4.7e-09 64.3 68 51.5
Ciclev10023861m.g Citrus clementina HOM05D006282 ORTHO05D007460 6.2e-09 63.9 72 47.2
Prupe.1G203300 Prunus persica HOM05D006282 ORTHO05D007460 8.0e-09 63.5 74 52.7
Cc00_g15290 Coffea canephora HOM05D006282 ORTHO05D007460 1.4e-08 62.8 79 48.1
Lalb_Chr08g0233621 Lupinus albus HOM05D006282 ORTHO05D007460 1.4e-08 62.8 71 54.9
Glyma.12G049300 Glycine max HOM05D006282 ORTHO05D007460 1.8e-08 62.4 71 52.1
Manes.04G048673 Manihot esculenta HOM05D006282 ORTHO05D007460 1.8e-08 62.4 68 52.9
Cfa015244 Carpinus fangiana HOM05D006282 ORTHO05D007460 2.3e-08 62.0 68 52.9
TWI63G0935 Tripterygium wilfordii HOM05D006282 ORTHO05D007460 2.3e-08 62.0 79 49.4
Cfa015249 Carpinus fangiana HOM05D006282 ORTHO05D007460 3.1e-08 61.6 68 52.9
Cfa015245 Carpinus fangiana HOM05D006282 ORTHO05D007460 4.0e-08 61.2 78 47.4
Glyma.11G124700 Glycine max HOM05D006282 ORTHO05D007460 4.0e-08 61.2 72 50.0
Lalb_Chr11g0073031 Lupinus albus HOM05D006282 ORTHO05D007460 4.0e-08 61.2 71 53.5
Oeu034174.1 Olea europaea HOM05D006282 ORTHO05D007460 4.0e-08 61.2 71 40.8
Phvul.011G051600 Phaseolus vulgaris HOM05D006282 ORTHO05D007460 5.2e-08 60.8 71 53.5
Potri.016G099600 Populus trichocarpa HOM05D006282 ORTHO05D007460 5.2e-08 60.8 77 50.6
Prupe.1G203400 Prunus persica HOM05D006282 ORTHO05D007460 5.2e-08 60.8 68 48.5
Cfa015252 Carpinus fangiana HOM05D006282 ORTHO05D007460 6.8e-08 60.5 68 50.0
Cc03_g13680 Coffea canephora HOM05D006282 ORTHO05D007460 6.8e-08 60.5 79 48.1
MELO3C017773.2 Cucumis melo HOM05D006282 ORTHO05D007460 6.8e-08 60.5 71 50.7
Manes.04G045337 Manihot esculenta HOM05D006282 ORTHO05D007460 6.8e-08 60.5 67 53.7
Oeu020810.1 Olea europaea HOM05D006282 ORTHO05D007460 6.8e-08 60.5 68 44.1
Cfa015251 Carpinus fangiana HOM05D006282 ORTHO05D007460 8.9e-08 60.1 79 48.1
Gohir.D10G124500 Gossypium hirsutum HOM05D006282 ORTHO05D007460 8.9e-08 60.1 71 43.7
Cc00_g15280 Coffea canephora HOM05D006282 ORTHO05D007460 1.2e-07 59.7 79 48.1
Cc00_g33840 Coffea canephora HOM05D006282 ORTHO05D007460 1.2e-07 59.7 79 48.1
CsaV3_4G002680 Cucumis sativus L. HOM05D006282 ORTHO05D007460 1.2e-07 59.7 69 50.7
Gohir.A10G142000 Gossypium hirsutum HOM05D006282 ORTHO05D007460 1.2e-07 59.7 71 43.7
arahy.Tifrunner.gnm1.ann1.HGL526 Arachis hypogaea HOM05D006282 ORTHO05D007460 1.5e-07 59.3 47 68.1
Gorai.011G137600 Gossypium raimondii HOM05D006282 ORTHO05D007460 1.5e-07 59.3 71 43.7
Cfa015231 Carpinus fangiana HOM05D006282 ORTHO05D007460 2.0e-07 58.9 68 52.9
QL10p052970 Quercus lobata HOM05D006282 ORTHO05D007460 2.0e-07 58.9 67 50.7
CiPaw.02G102700 Carya illinoinensis HOM05D006282 ORTHO05D007460 2.6e-07 58.5 73 54.8
Manes.04G046449 Manihot esculenta HOM05D006282 ORTHO05D007460 2.6e-07 58.5 68 51.5
Manes.04G047561 Manihot esculenta HOM05D006282 ORTHO05D007460 2.6e-07 58.5 68 48.5
CiPaw.05G255000 Carya illinoinensis HOM05D006282 ORTHO05D007460 3.4e-07 58.2 69 49.3
Rhsim02G0083100 Rhododendron simsii HOM05D006282 ORTHO05D007460 4.4e-07 57.8 62 51.6
Cfa015253 Carpinus fangiana HOM05D006282 ORTHO05D007460 5.8e-07 57.4 78 43.6
ClCG07G015130 Citrullus lanatus HOM05D002360 ORTHO05D006971 5.8e-07 57.4 71 46.5
QL10p053002 Quercus lobata HOM05D006282 ORTHO05D007460 5.8e-07 57.4 67 44.8
QL10p053038 Quercus lobata HOM05D006282 ORTHO05D007460 5.8e-07 57.4 67 47.8
Sed0024901 Sechium edule HOM05D006282 ORTHO05D007460 5.8e-07 57.4 72 50.0
CiPaw.02G102800 Carya illinoinensis HOM05D006282 ORTHO05D007460 9.8e-07 56.6 68 45.6
QL10p053061 Quercus lobata HOM05D006282 ORTHO05D007460 9.8e-07 56.6 68 48.5
MBI07_g38402_MAGBIO Magnolia biondii HOM05D006282 ORTHO05D007460 1.3e-06 56.2 78 46.2
Oeu016604.1 Olea europaea HOM05D006282 ORTHO05D007460 1.3e-06 56.2 68 44.1
QL10p052968 Quercus lobata HOM05D006282 ORTHO05D007460 2.2e-06 55.5 67 43.3
Cfa015254 Carpinus fangiana HOM05D006282 ORTHO05D007460 2.9e-06 55.1 79 45.6
Migut.N03076 Erythranthe guttata HOM05D006282 ORTHO05D007460 2.9e-06 55.1 79 45.6
CiPaw.01G201300 Carya illinoinensis HOM05D006282 ORTHO05D007460 3.7e-06 54.7 69 47.8
QL10p052996 Quercus lobata HOM05D006282 ORTHO05D007460 3.7e-06 54.7 67 43.3
Cfa015248 Carpinus fangiana HOM05D006282 ORTHO05D007460 4.9e-06 54.3 68 47.1
Oeu023771.1 Olea europaea HOM05D006282 ORTHO05D007460 6.4e-06 53.9 78 41.0
QL10p052947 Quercus lobata HOM05D006282 ORTHO05D007460 6.4e-06 53.9 67 43.3
QL10p052979 Quercus lobata HOM05D006282 ORTHO05D007460 6.4e-06 53.9 67 43.3
Cfa015246 Carpinus fangiana HOM05D006282 ORTHO05D007460 8.3e-06 53.5 68 48.5
CiPaw.02G102600 Carya illinoinensis HOM05D006282 ORTHO05D007460 8.3e-06 53.5 70 47.1
Lsat_1_v5_gn_9_60260 Lactuca sativa HOM05D006282 ORTHO05D007460 8.3e-06 53.5 64 50.0
QL10p052886 Quercus lobata HOM05D006282 ORTHO05D007460 8.3e-06 53.5 67 44.8
QL10p052931 Quercus lobata HOM05D006282 ORTHO05D007460 8.3e-06 53.5 67 44.8


User provided reference genes

Program Settings