Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.H00160 Eucalyptus grandis HOM05D006638 ORTHO05D008246 2.2e-123 445.7 228 100.0
Haze_02520 Corylus avellana HOM05D006638 ORTHO05D008246 5.5e-74 281.6 178 78.1
QL04p037061 Quercus lobata HOM05D006638 ORTHO05D008246 7.2e-74 281.2 178 79.8
Dinv44116 Davidia involucrata HOM05D006638 ORTHO05D008246 1.6e-73 280.0 218 67.4
CiPaw.14G025400 Carya illinoinensis HOM05D006638 ORTHO05D008246 4.6e-73 278.5 178 79.8
ClCG05G000210 Citrullus lanatus HOM05D006638 ORTHO05D008246 7.9e-73 277.7 194 72.2
COL.COLO4_12484 Corchorus olitorius HOM05D006638 ORTHO05D008246 1.8e-72 276.6 179 76.0
Thecc.01G384300 Theobroma cacao HOM05D006638 ORTHO05D008246 2.3e-72 276.2 180 76.7
Ca_19858_v3 Cicer arietinum L. HOM05D006638 ORTHO05D008246 5.1e-72 275.0 178 75.8
Hma1.2p1_0001F.1_g001240 Hydrangea macrophylla HOM05D006638 ORTHO05D008246 5.1e-72 275.0 178 77.5
Lalb_Chr07g0190301 Lupinus albus HOM05D006638 ORTHO05D008246 5.1e-72 275.0 178 78.1
Sabra01G0171300 Salix brachista HOM05D006638 ORTHO05D008246 5.1e-72 275.0 178 79.2
Cpa.g.sc49.148 Carica papaya HOM05D006638 ORTHO05D008246 6.7e-72 274.6 203 69.0
EL10Ac1g00836 Beta vulgaris HOM05D006638 ORTHO05D008246 1.5e-71 273.5 209 70.8
FAN03G2254 Fragaria x ananassa HOM05D006638 ORTHO05D008246 2.0e-71 273.1 178 78.1
Nn2g12739 Nelumbo nucifera HOM05D006638 ORTHO05D008246 2.5e-71 272.7 178 78.1
CsaV3_3G007360 Cucumis sativus L. HOM05D006638 ORTHO05D008246 3.3e-71 272.3 192 72.4
Aqoxy7G00747 Aquilegia oxysepala HOM05D006638 ORTHO05D008246 4.3e-71 271.9 178 77.0
Duzib133G1291 Durio zibethinus HOM05D006638 ORTHO05D008246 4.3e-71 271.9 179 76.0
Glyma.03G033200 Glycine max HOM05D006638 ORTHO05D008246 9.7e-71 270.8 190 72.6
Potri.004G225600 Populus trichocarpa HOM05D006638 ORTHO05D008246 9.7e-71 270.8 178 78.7
arahy.Tifrunner.gnm1.ann1.WQW1G6 Arachis hypogaea HOM05D006638 ORTHO05D008246 1.3e-70 270.4 182 73.1
ECA234G0121 Erigeron canadensis HOM05D006638 ORTHO05D008246 1.3e-70 270.4 184 73.9
FvH4_7g11040 Fragaria vesca HOM05D006638 ORTHO05D008246 2.2e-70 269.6 178 77.0
FAN06G4764 Fragaria x ananassa HOM05D006638 ORTHO05D008246 2.2e-70 269.6 178 77.0
Lj3g0022109 Lotus japonicus HOM05D006638 ORTHO05D008246 2.2e-70 269.6 178 72.5
RcHm_v2.0_Chr1g0349031 Rosa chinensis HOM05D006638 ORTHO05D008246 2.8e-70 269.2 231 62.8
Psat0s3685g0120 Pisum sativum HOM05D006638 ORTHO05D008246 3.7e-70 268.9 178 73.6
Prupe.2G137100 Prunus persica HOM05D006638 ORTHO05D008246 4.8e-70 268.5 178 75.3
TAR636G0703 Trochodendron aralioides HOM05D006638 ORTHO05D008246 8.2e-70 267.7 178 77.0
FAN10G1288 Fragaria x ananassa HOM05D006638 ORTHO05D008246 1.4e-69 266.9 178 76.4
FAN10G2039 Fragaria x ananassa HOM05D006638 ORTHO05D008246 1.4e-69 266.9 178 76.4
Sc23g0003780 Simmondsia chinensis HOM05D006638 ORTHO05D008246 1.4e-69 266.9 178 78.1
HanXRQChr12g0384211 Helianthus annuus HOM05D006638 ORTHO05D008246 1.8e-69 266.5 182 72.0
PSO170G5140 Papaver somniferum HOM05D006638 ORTHO05D008246 1.8e-69 266.5 178 75.8
Atru.chr5.234 Acer truncatum HOM05D006638 ORTHO05D008246 2.4e-69 266.2 178 75.8
Gohir.A12G095100 Gossypium hirsutum HOM05D006638 ORTHO05D008246 2.4e-69 266.2 200 69.0
CANSAT56G0739 Cannabis sativa HOM05D006638 ORTHO05D008246 3.1e-69 265.8 177 75.1
Gorai.008G106400 Gossypium raimondii HOM05D006638 ORTHO05D008246 4.1e-69 265.4 193 71.0
GSVIVG01018156001 Vitis vinifera HOM05D006638 ORTHO05D008246 4.1e-69 265.4 177 75.7
SGA_v2.0_scaffold43G16517 Striga asiatica HOM05D006638 ORTHO05D008246 6.9e-69 264.6 182 74.2
DCAR_029874 Daucus carota HOM05D006638 ORTHO05D008246 9.1e-69 264.2 178 76.4
arahy.Tifrunner.gnm1.ann1.B645Y9 Arachis hypogaea HOM05D006638 ORTHO05D008246 1.2e-68 263.8 189 70.4
MD07G1114500 Malus domestica HOM05D006638 ORTHO05D008246 1.2e-68 263.8 178 74.7
Rhsim05G0215700 Rhododendron simsii HOM05D006638 ORTHO05D008246 1.2e-68 263.8 204 67.2
TWI23G0519 Tripterygium wilfordii HOM05D006638 ORTHO05D008246 1.2e-68 263.8 226 62.4
Atru.BG.68.p Acer truncatum HOM05D006638 ORTHO05D008246 2.0e-68 263.1 170 78.2
PGR142G0596 Punica granatum HOM05D006638 ORTHO05D008246 2.0e-68 263.1 265 58.1
Lsat_1_v5_gn_4_45501 Lactuca sativa HOM05D006638 ORTHO05D008246 3.4e-68 262.3 179 73.7
Sopen01g036620 Solanum pennellii HOM05D006638 ORTHO05D008246 4.5e-68 261.9 179 73.2
PGSC0003DMG400025975 Solanum tuberosum HOM05D006638 ORTHO05D008246 4.5e-68 261.9 179 73.2
SalBow1G6174 Salvia bowleyana HOM05D006638 ORTHO05D008246 7.7e-68 261.2 184 75.0
Solyc01g090880.3 Solanum lycopersicum HOM05D006638 ORTHO05D008246 1.0e-67 260.8 179 72.6
Nitab4.5_0011151g0010 Nicotiana tabacum HOM05D006638 ORTHO05D008246 1.7e-67 260.0 177 74.0
BcaC07g42567 Brassica carinata HOM05D006638 ORTHO05D008246 8.5e-67 257.7 178 71.9
BraA09t41748Z Brassica rapa HOM05D006638 ORTHO05D008246 8.5e-67 257.7 178 71.3
Medtr4g027430 Medicago truncatula HOM05D006638 ORTHO05D008246 8.5e-67 257.7 178 73.0
Migut.N01611 Erythranthe guttata HOM05D006638 ORTHO05D008246 1.1e-66 257.3 178 73.6
THA.LOC104809455 Tarenaya hassleriana HOM05D006638 ORTHO05D008246 2.5e-66 256.1 204 65.7
Nitab4.5_0000859g0190 Nicotiana tabacum HOM05D006638 ORTHO05D008246 4.2e-66 255.4 170 75.9
Hund17047 Selenicereus undatus HOM05D006638 ORTHO05D008246 4.2e-66 255.4 188 69.7
C08p47510 Brassica napus HOM05D006638 ORTHO05D008246 5.5e-66 255.0 178 70.8
CAN.G1872.5 Capsicum annuum HOM05D006638 ORTHO05D008246 5.5e-66 255.0 178 72.5
Ciclev10023836m.g Citrus clementina HOM05D006638 ORTHO05D008246 5.5e-66 255.0 179 73.2
MSTRG.4914 Avicennia marina HOM05D006638 ORTHO05D008246 7.2e-66 254.6 178 71.9
Lj1g0022300 Lotus japonicus HOM05D006638 ORTHO05D008246 7.2e-66 254.6 179 70.9
BcaC07g41715 Brassica carinata HOM05D006638 ORTHO05D008246 9.4e-66 254.2 178 70.8
Lj7A537T49 Lonicera japonica HOM05D006638 ORTHO05D008246 1.2e-65 253.8 178 73.0
unitig_748.g7114 Utricularia gibba HOM05D006638 ORTHO05D008246 1.2e-65 253.8 178 69.7
BolC8t52292H Brassica oleracea HOM05D006638 ORTHO05D008246 1.6e-65 253.4 177 71.2
Carub.0001s1192 Capsella rubella HOM05D006638 ORTHO05D008246 4.7e-65 251.9 179 69.3
Thhalv10008640m.g Eutrema salsugineum HOM05D006638 ORTHO05D008246 7.9e-65 251.1 178 69.7
CARHR012550 Cardamine hirsuta HOM05D006638 ORTHO05D008246 1.8e-64 250.0 178 69.7
Aa31LG1G2420 Aethionema arabicum HOM05D006638 ORTHO05D008246 8.8e-64 247.7 178 69.1
AT1G12244 Arabidopsis thaliana HOM05D006638 ORTHO05D008246 1.1e-63 247.3 179 68.2
AL1G23530 Arabidopsis lyrata HOM05D006638 ORTHO05D008246 2.0e-63 246.5 179 68.2
CDE02G4315 Ceratophyllum demersum HOM05D000218 ORTHO05D000125 1.1e-61 240.7 167 72.5
Cc02_g24450 Coffea canephora HOM05D006638 ORTHO05D008246 1.5e-60 236.9 173 72.8
HPP92_022319 Vanilla planifolia HOM05D006638 ORTHO05D008246 2.9e-59 232.6 170 71.2
MELO3C005958.2 Cucumis melo HOM05D006638 ORTHO05D008246 1.1e-58 230.7 288 48.6
HPP92_022327 Vanilla planifolia HOM05D006638 ORTHO05D008246 3.2e-58 229.2 170 70.0
VMungo0331G0589 Vigna mungo HOM05D006638 ORTHO05D008246 5.5e-58 228.4 178 66.3
TAR629G0886 Trochodendron aralioides HOM05D006638 ORTHO05D008246 1.0e-56 224.2 178 68.0
Peaxi162Scf00803g00218 Petunia axillaris HOM05D006638 ORTHO05D008246 6.7e-56 221.5 178 64.6
Sp1g10860 Schrenkiella parvula HOM05D006638 ORTHO05D008246 1.2e-52 210.7 178 63.5
Manes.17G011000 Manihot esculenta HOM05D006638 ORTHO05D008246 1.3e-51 207.2 147 76.2
Actinidia33482 Actinidia chinensis HOM05D006638 ORTHO05D008246 2.5e-50 203.0 181 64.1
Phvul.010G071600 Phaseolus vulgaris HOM05D006638 ORTHO05D008246 5.5e-50 201.8 123 80.5
Ah.01g003990 Amaranthus hybridus HOM05D006638 ORTHO05D008246 6.1e-49 198.4 138 76.1
CSS0044007 Camellia sinensis var. sinensis HOM05D006638 ORTHO05D008246 6.1e-49 198.4 214 53.7
Os10g0555200 Oryza sativa ssp. japonica HOM05D006638 ORTHO05D008246 6.1e-49 198.4 176 61.4
Gohir.D12G097700 Gossypium hirsutum HOM05D006638 ORTHO05D008246 1.4e-48 197.2 137 75.2
CSS0019813 Camellia sinensis var. sinensis HOM05D006638 ORTHO05D008246 1.8e-48 196.8 214 53.7
ATR0317G113 Amborella trichopoda HOM05D006638 ORTHO05D008246 4.4e-47 192.2 141 68.1
Sed0019776 Sechium edule HOM05D006638 ORTHO05D008246 4.8e-46 188.7 121 76.0
MBI04_g09497_MAGBIO Magnolia biondii HOM05D006638 ORTHO05D008246 2.2e-43 179.9 187 56.7
TPR.G27556 Trifolium pratense HOM05D006638 ORTHO05D008246 8.5e-43 177.9 123 71.5
Zm00001eb023510 Zea mays HOM05D006638 ORTHO05D008246 1.9e-42 176.8 150 65.3
Hma1.2p1_0001F.1_g001250 Hydrangea macrophylla HOM05D006638 ORTHO05D008246 4.7e-41 172.2 116 76.7
AagrBONN_evm.TU.Sc2ySwM_228.3890 Anthoceros agrestis HOM05D006638 ORTHO05D008246 4.4e-39 165.6 171 53.8
vmacro21035 Vaccinium macrocarpon HOM05D006638 ORTHO05D008246 2.8e-38 162.9 116 72.4
Oeu000021.1 Olea europaea HOM05D006638 ORTHO05D008246 7.0e-37 158.3 106 78.3
CSS0006996 Camellia sinensis var. sinensis HOM05D006638 ORTHO05D008246 9.1e-37 157.9 150 60.7
Mapoly0010s0011 Marchantia polymorpha HOM05D006638 ORTHO05D008246 1.2e-36 157.5 152 53.3
Medtr2g064690 Medicago truncatula HOM05D006638 ORTHO05D008246 2.3e-35 153.3 125 67.2
CSS0041268 Camellia sinensis var. sinensis HOM05D006638 ORTHO05D008246 7.2e-34 148.3 150 59.3
Pp3c1_23680 Physcomitrium patens HOM05D006638 ORTHO05D008246 2.1e-33 146.7 172 47.7
FAN01G0965 Fragaria x ananassa HOM05D006638 ORTHO05D008246 5.2e-32 142.1 98 75.5
Rhsim01G0151400 Rhododendron simsii HOM05D006638 ORTHO05D008246 3.4e-31 139.4 100 69.0
SMO340G0150 Selaginella moellendorffii HOM05D006638 ORTHO05D008246 6.1e-25 118.6 168 44.6
TPR.G4994 Trifolium pratense HOM05D006954 ORTHO05D008246 7.0e-21 105.1 87 57.5
Pp3c1_23620 Physcomitrium patens HOM05D006638 ORTHO05D008246 3.5e-20 102.8 146 42.5
CBR_g17705 Chara braunii HOM05D006638 ORTHO05D008246 6.8e-16 88.6 167 37.1
Lsat_1_v5_gn_6_51920 Lactuca sativa HOM05D006638 ORTHO05D008246 1.3e-14 84.3 71 59.2
Medtr2g064700 Medicago truncatula HOM05D006638 ORTHO05D008246 3.2e-13 79.7 43 81.4
vmacro21034 Vaccinium macrocarpon HOM05D006638 ORTHO05D008246 6.0e-12 75.5 43 79.1
Lsat_1_v5_gn_1_125220 Lactuca sativa HOM05D006638 ORTHO05D008246 1.6e-09 67.4 45 68.9
MELO3C033920.2 Cucumis melo HOM05D006638 ORTHO05D008246 6.2e-09 65.5 59 57.6
Medtr2g064670 Medicago truncatula HOM05D006638 ORTHO05D008246 5.2e-08 62.4 34 76.5
RcHm_v2.0_Chr1g0349061 Rosa chinensis HOM05D006638 ORTHO05D008246 2.0e-07 60.5 39 71.8
SEGI_24864 Sequoiadendron giganteum HOM05D006638 ORTHO05D008246 7.6e-07 58.5 50 56.0
Solyc12g035620.2 Solanum lycopersicum HOM05D006638 ORTHO05D008246 7.6e-07 58.5 43 62.8


User provided reference genes

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