Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.H00127 Eucalyptus grandis HOM05D006857 ORTHO05D008679 1.1e-235 819.7 445 100.0
Prupe.1G048100 Prunus persica HOM05D006857 ORTHO05D008679 2.9e-156 555.8 391 68.3
Cfa014781 Carpinus fangiana HOM05D006857 ORTHO05D008679 2.1e-154 549.7 391 67.5
CANSAT78G0655 Cannabis sativa HOM05D006857 ORTHO05D008679 1.2e-152 543.9 391 67.5
CSS0034732 Camellia sinensis var. sinensis HOM05D006857 ORTHO05D008679 1.5e-152 543.5 391 66.8
QL06p021004 Quercus lobata HOM05D006857 ORTHO05D008679 4.4e-152 542.0 391 66.5
PGR031G1141 Punica granatum HOM05D006857 ORTHO05D008679 1.3e-151 540.4 448 63.2
PGR031G1585 Punica granatum HOM05D006857 ORTHO05D008679 1.3e-151 540.4 448 63.2
CiPaw.02G107000 Carya illinoinensis HOM05D006857 ORTHO05D008679 2.2e-151 539.7 392 66.6
RcHm_v2.0_Chr4g0395361 Rosa chinensis HOM05D006857 ORTHO05D008679 2.0e-149 533.1 391 64.5
Thecc.04G264000 Theobroma cacao HOM05D006857 ORTHO05D008679 2.7e-149 532.7 389 63.8
MD16G1226200 Malus domestica HOM05D006857 ORTHO05D008679 7.8e-149 531.2 391 66.0
Manes.03G158900 Manihot esculenta HOM05D006857 ORTHO05D008679 3.9e-148 528.9 392 65.6
Actinidia35816 Actinidia chinensis HOM05D006857 ORTHO05D008679 1.1e-147 527.3 391 66.5
Nn1g02958 Nelumbo nucifera HOM05D006857 ORTHO05D008679 1.1e-147 527.3 391 65.0
FvH4_4g04570 Fragaria vesca HOM05D006857 ORTHO05D008679 4.3e-147 525.4 391 62.7
Cpa.g.sc44.1 Carica papaya HOM05D006857 ORTHO05D008679 5.6e-147 525.0 391 64.2
TWI09G0838 Tripterygium wilfordii HOM05D006857 ORTHO05D008679 7.3e-147 524.6 391 63.9
TAR362G0064 Trochodendron aralioides HOM05D006857 ORTHO05D008679 7.3e-147 524.6 392 65.6
Glyma.10G132600 Glycine max HOM05D006857 ORTHO05D008679 1.0e-145 520.8 443 57.6
vmacro08554 Vaccinium macrocarpon HOM05D006857 ORTHO05D008679 1.8e-145 520.0 391 66.5
MD07G1289900 Malus domestica HOM05D006857 ORTHO05D008679 4.0e-145 518.8 392 64.8
FAN17G2805 Fragaria x ananassa HOM05D006857 ORTHO05D008679 1.5e-144 516.9 384 62.8
Ciclev10005032m.g Citrus clementina HOM05D006857 ORTHO05D008679 2.0e-144 516.5 391 65.0
Duzib151G0230 Durio zibethinus HOM05D006857 ORTHO05D008679 3.4e-144 515.8 389 62.2
CsaV3_3G011690 Cucumis sativus L. HOM05D006857 ORTHO05D008679 5.8e-144 515.0 391 62.7
Rhsim04G0172300 Rhododendron simsii HOM05D006857 ORTHO05D008679 2.9e-143 512.7 388 65.7
Atru.chr4.1915 Acer truncatum HOM05D006857 ORTHO05D008679 1.1e-142 510.8 393 67.2
Lalb_Chr03g0036951 Lupinus albus HOM05D006857 ORTHO05D008679 1.1e-142 510.8 392 63.0
GSVIVG01027915001 Vitis vinifera HOM05D006857 ORTHO05D008679 1.1e-142 510.8 391 63.4
Medtr8g085480 Medicago truncatula HOM05D006857 ORTHO05D008679 1.4e-142 510.4 391 61.9
Lj6g0000537 Lotus japonicus HOM05D006857 ORTHO05D008679 2.7e-141 506.1 391 62.4
Nitab4.5_0000194g0200 Nicotiana tabacum HOM05D006857 ORTHO05D008679 3.5e-141 505.8 391 63.7
Haze_11458 Corylus avellana HOM05D006857 ORTHO05D008679 6.0e-141 505.0 343 70.8
Psat7g076560 Pisum sativum HOM05D006857 ORTHO05D008679 6.0e-141 505.0 391 61.4
Ca_17963_v3 Cicer arietinum L. HOM05D006857 ORTHO05D008679 1.0e-140 504.2 392 62.5
ClCG05G004000 Citrullus lanatus HOM05D006857 ORTHO05D008679 2.3e-140 503.1 388 62.4
Gorai.011G177900 Gossypium raimondii HOM05D006857 ORTHO05D008679 8.6e-140 501.1 391 60.6
Gohir.D10G158400 Gossypium hirsutum HOM05D006857 ORTHO05D008679 1.5e-139 500.4 391 60.6
Nitab4.5_0013063g0010 Nicotiana tabacum HOM05D006857 ORTHO05D008679 3.3e-139 499.2 391 63.2
MELO3C006377.2 Cucumis melo HOM05D006857 ORTHO05D008679 1.2e-138 497.3 404 59.9
arahy.Tifrunner.gnm1.ann1.I81STG Arachis hypogaea HOM05D006857 ORTHO05D008679 6.2e-138 495.0 390 60.8
Aqoxy2G03746 Aquilegia oxysepala HOM05D006857 ORTHO05D008679 8.0e-138 494.6 391 62.4
Sc19g0005530 Simmondsia chinensis HOM05D006857 ORTHO05D008679 8.0e-138 494.6 410 58.8
VMungo0720G0849 Vigna mungo HOM05D006857 ORTHO05D008679 1.1e-137 494.2 389 59.9
CAN.G524.29 Capsicum annuum HOM05D006857 ORTHO05D008679 1.8e-137 493.4 390 62.3
arahy.Tifrunner.gnm1.ann1.SJBM1Y Arachis hypogaea HOM05D006857 ORTHO05D008679 3.1e-137 492.7 389 60.7
COL.COLO4_15963 Corchorus olitorius HOM05D006857 ORTHO05D008679 5.2e-137 491.9 355 65.9
Solyc09g090690.4 Solanum lycopersicum HOM05D006857 ORTHO05D008679 8.9e-137 491.1 392 62.8
Sopen09g033630 Solanum pennellii HOM05D006857 ORTHO05D008679 1.2e-136 490.7 392 62.8
Hund20529 Selenicereus undatus HOM05D006857 ORTHO05D008679 2.0e-136 490.0 384 62.0
Aqoxy7G02302 Aquilegia oxysepala HOM05D006857 ORTHO05D008679 2.6e-136 489.6 391 61.9
Sabra08G0131200 Salix brachista HOM05D006857 ORTHO05D008679 9.8e-136 487.6 400 60.8
Aqoxy7G02465 Aquilegia oxysepala HOM05D006857 ORTHO05D008679 1.3e-135 487.3 391 61.9
PSO017G4333 Papaver somniferum HOM05D006857 ORTHO05D008679 6.4e-135 485.0 393 61.8
PGSC0003DMG400017145 Solanum tuberosum HOM05D006857 ORTHO05D008679 1.1e-134 484.2 392 62.0
PSO063G2784 Papaver somniferum HOM05D006857 ORTHO05D008679 1.9e-134 483.4 393 61.8
AUR62015271 Chenopodium quinoa HOM05D006857 ORTHO05D008679 2.4e-134 483.0 386 60.6
Cc03_g06310 Coffea canephora HOM05D006857 ORTHO05D008679 1.2e-133 480.7 391 60.6
Potri.008G171900 Populus trichocarpa HOM05D006857 ORTHO05D008679 1.0e-132 477.6 400 59.5
Hma1.2p1_0112F.1_g054740 Hydrangea macrophylla HOM05D006857 ORTHO05D008679 8.6e-132 474.6 362 64.4
EL10Ac3g06657 Beta vulgaris HOM05D006857 ORTHO05D008679 1.2e-130 470.7 387 59.2
Peaxi162Scf00153g01846 Petunia axillaris HOM05D006857 ORTHO05D008679 1.6e-130 470.3 393 60.6
Sed0022275 Sechium edule HOM05D006857 ORTHO05D008679 1.8e-129 466.8 347 64.6
Migut.G00555 Erythranthe guttata HOM05D006857 ORTHO05D008679 2.9e-127 459.5 390 57.4
HanXRQChr06g0182801 Helianthus annuus HOM05D006857 ORTHO05D008679 2.9e-127 459.5 391 58.3
AUR62018068 Chenopodium quinoa HOM05D006857 ORTHO05D008679 1.9e-126 456.8 366 60.9
Phvul.007G231500 Phaseolus vulgaris HOM05D006857 ORTHO05D008679 3.5e-125 452.6 360 59.7
Lj6C621T18 Lonicera japonica HOM05D006857 ORTHO05D008679 4.6e-125 452.2 488 50.6
DCAR_002298 Daucus carota HOM05D004684 ORTHO05D006904 7.8e-125 451.4 364 61.3
Ah.04g153670 Amaranthus hybridus HOM05D006857 ORTHO05D008679 3.9e-124 449.1 385 56.1
ECA234G1558 Erigeron canadensis HOM05D006857 ORTHO05D005985 1.5e-123 447.2 373 59.8
Lsat_1_v5_gn_2_41360 Lactuca sativa HOM05D006857 ORTHO05D008679 1.6e-122 443.7 392 57.7
Aa31LG9G4440 Aethionema arabicum HOM05D006857 ORTHO05D008679 6.8e-121 438.3 392 54.1
MSTRG.4172 Avicennia marina HOM05D006857 ORTHO05D008679 1.7e-119 433.7 375 57.6
ATR0787G032 Amborella trichopoda HOM05D006857 ORTHO05D008679 1.6e-117 427.2 401 54.9
THA.LOC104804575 Tarenaya hassleriana HOM05D006857 ORTHO05D008679 3.5e-117 426.0 391 54.2
Sp7g10880 Schrenkiella parvula HOM05D006857 ORTHO05D008679 3.9e-116 422.5 394 54.1
CARHR218870 Cardamine hirsuta HOM05D006857 ORTHO05D008679 1.5e-115 420.6 393 54.2
Carub.0007s2931 Capsella rubella HOM05D006857 ORTHO05D008679 1.3e-114 417.5 391 53.7
Oeu002936.2 Olea europaea HOM05D006857 ORTHO05D008679 8.1e-114 414.8 454 46.9
AT4G13330 Arabidopsis thaliana HOM05D006857 ORTHO05D008679 3.1e-113 412.9 395 54.2
C06p17330 Brassica napus HOM05D006857 ORTHO05D008679 9.0e-113 411.4 394 53.6
BolC6t36929H Brassica oleracea HOM05D006857 ORTHO05D008679 9.0e-113 411.4 394 53.6
SGA_v2.0_scaffold67G22686 Striga asiatica HOM05D006857 ORTHO05D008679 1.2e-112 411.0 395 52.7
A05p16520 Brassica napus HOM05D006857 ORTHO05D008679 2.0e-112 410.2 393 52.9
BraA05t20557Z Brassica rapa HOM05D006857 ORTHO05D008679 4.4e-112 409.1 393 52.9
AL9U10380 Arabidopsis lyrata HOM05D006857 ORTHO05D008679 9.9e-112 407.9 395 53.9
Thhalv10026810m.g Eutrema salsugineum HOM05D006857 ORTHO05D008679 1.3e-111 407.5 390 53.3
Dinv27112 Davidia involucrata HOM05D006857 ORTHO05D008679 9.3e-110 401.4 308 65.3
Os04g0510700 Oryza sativa ssp. japonica HOM05D006857 ORTHO05D008679 3.9e-108 396.0 395 52.2
SalBow3G1529 Salvia bowleyana HOM05D006857 ORTHO05D008679 2.5e-107 393.3 384 51.0
TPR.G11804 Trifolium pratense HOM05D006857 ORTHO05D008679 1.3e-106 391.0 306 60.8
Zm00001eb077400 Zea mays HOM05D006857 ORTHO05D008679 2.0e-104 383.6 389 49.9
CDE02G1483 Ceratophyllum demersum HOM05D006857 ORTHO05D008679 7.6e-96 355.1 396 47.0
MBI10_g35430_MAGBIO Magnolia biondii HOM05D006857 ORTHO05D008679 6.9e-81 305.4 293 54.9
SHI00774 Sapria himalayana HOM05D006857 ORTHO05D008679 1.3e-66 258.1 271 52.0
Pp3c15_24290 Physcomitrium patens HOM05D006857 ORTHO05D008679 2.8e-66 256.9 434 35.9
MBI10_g35433_MAGBIO Magnolia biondii HOM05D006857 ORTHO05D008679 9.1e-65 251.9 237 54.9
Mapoly0127s0023 Marchantia polymorpha HOM05D006857 ORTHO05D008679 1.2e-64 251.5 418 39.0
unitig_748.g8298 Utricularia gibba HOM05D006857 ORTHO05D008679 2.2e-55 220.7 215 48.8
BcaC08g44309 Brassica carinata HOM05D006857 ORTHO05D008679 9.8e-51 205.3 164 61.0
BcaC08g44310 Brassica carinata HOM05D006857 ORTHO05D008679 5.4e-49 199.5 220 47.7
CDE08G1596 Ceratophyllum demersum HOM05D006857 ORTHO05D008679 3.4e-43 180.3 183 49.7
FAN13G3085 Fragaria x ananassa HOM05D006857 ORTHO05D008679 1.6e-40 171.4 134 59.7
FvH4_5g26950 Fragaria vesca HOM05D006857 ORTHO05D008679 2.7e-40 170.6 113 67.3
unitig_748.g8297 Utricularia gibba HOM05D006857 ORTHO05D008679 2.5e-38 164.1 152 52.0
AagrBONN_evm.TU.Sc2ySwM_117.1189 Anthoceros agrestis HOM05D006857 ORTHO05D008679 1.4e-33 148.3 253 37.9
MBI10_g35434_MAGBIO Magnolia biondii HOM05D006857 ORTHO05D008679 5.0e-31 139.8 103 63.1
TPR.G25294 Trifolium pratense HOM05D006857 ORTHO05D008679 6.6e-23 112.8 111 48.6
SEGI_21065 Sequoiadendron giganteum HOM05D006857 ORTHO05D008679 3.0e-15 87.4 100 46.0
MD13G1221100 Malus domestica HOM05D006857 ORTHO05D008679 8.6e-15 85.9 98 49.0
SHI00775 Sapria himalayana HOM05D000105 ORTHO05D000023 3.7e-10 70.5 78 41.0
MCO07G483 Micromonas commoda HOM05D006857 ORTHO05D008679 4.9e-10 70.1 225 28.4
MCO09G143 Micromonas commoda HOM05D006857 ORTHO05D008679 5.4e-09 66.6 194 27.3
HanXRQChr11g0332551 Helianthus annuus HOM05D006857 ORTHO05D008679 4.3e-06 57.0 50 60.0


User provided reference genes

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