Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.H00100 Eucalyptus grandis HOM05D008849 ORTHO05D010556 8.5e-57 223.4 109 100.0
Eucgr.E01057 Eucalyptus grandis HOM05D008849 ORTHO05D010556 2.5e-48 195.3 109 86.2
Eucgr.H00101 Eucalyptus grandis HOM05D008849 ORTHO05D010556 3.5e-34 148.3 108 69.4
CiPaw.02G127100 Carya illinoinensis HOM05D008849 ORTHO05D010556 4.1e-19 98.2 105 43.8
Atru.chr4.1805 Acer truncatum HOM05D008849 ORTHO05D010556 5.4e-19 97.8 107 43.0
Ciclev10007007m.g Citrus clementina HOM05D008849 ORTHO05D010556 7.0e-19 97.4 104 47.1
FvH4_4g05650 Fragaria vesca HOM05D008849 ORTHO05D010556 9.2e-19 97.1 105 43.8
RcHm_v2.0_Chr4g0396831 Rosa chinensis HOM05D008849 ORTHO05D010556 9.2e-19 97.1 103 44.7
FAN17G1524 Fragaria x ananassa HOM05D008849 ORTHO05D010556 4.5e-18 94.7 105 43.8
Potri.003G175000 Populus trichocarpa HOM05D008849 ORTHO05D010556 1.3e-17 93.2 105 41.9
Potri.001G053200 Populus trichocarpa HOM05D008849 ORTHO05D010556 1.7e-17 92.8 105 42.9
Thecc.04G213000 Theobroma cacao HOM05D008849 ORTHO05D010556 8.6e-17 90.5 107 43.0
Sabra03G0128300 Salix brachista HOM05D008849 ORTHO05D010556 1.1e-16 90.1 105 41.0
QL11p022534 Quercus lobata HOM05D008849 ORTHO05D010556 2.5e-16 89.0 103 35.0
CiPaw.01G204700 Carya illinoinensis HOM05D008849 ORTHO05D010556 1.2e-15 86.7 105 39.0
Manes.15G049200 Manihot esculenta HOM05D008849 ORTHO05D010556 3.6e-15 85.1 106 37.7
Cfa014873 Carpinus fangiana HOM05D008849 ORTHO05D010556 2.3e-14 82.4 105 37.1
Gorai.011G162700 Gossypium raimondii HOM05D008849 ORTHO05D010556 3.0e-14 82.0 103 38.8
Gohir.A09G202100 Gossypium hirsutum HOM05D008849 ORTHO05D010556 1.2e-13 80.1 103 40.8
Gohir.A10G120800 Gossypium hirsutum HOM05D008849 ORTHO05D010556 1.5e-13 79.7 103 37.9
Gohir.D09G196100 Gossypium hirsutum HOM05D008849 ORTHO05D010556 3.4e-13 78.6 103 39.8
Gohir.D10G145500 Gossypium hirsutum HOM05D008849 ORTHO05D010556 3.4e-13 78.6 97 39.2
Gorai.006G219500 Gossypium raimondii HOM05D008849 ORTHO05D010556 3.4e-13 78.6 103 39.8
Rhsim09G0049000 Rhododendron simsii HOM05D004546 ORTHO05D005419 3.2e-11 72.0 88 37.5
GSVIVG01012794001 Vitis vinifera HOM05D008849 ORTHO05D010556 3.2e-11 72.0 103 33.0
FAN17G2089 Fragaria x ananassa HOM05D008849 ORTHO05D010556 4.1e-11 71.6 109 30.3
FvH4_4g05643 Fragaria vesca HOM05D008849 ORTHO05D010556 1.2e-10 70.1 108 30.6
COL.COLO4_26204 Corchorus olitorius HOM05D008849 ORTHO05D010556 1.6e-10 69.7 104 30.8
RhsimUnG0234900 Rhododendron simsii HOM05D004546 ORTHO05D005419 1.6e-10 69.7 93 33.3
Rhsim09G0048500 Rhododendron simsii HOM05D004546 ORTHO05D005419 3.5e-10 68.6 112 32.1
vmacro22823 Vaccinium macrocarpon HOM05D000256 ORTHO05D000119 3.0e-09 65.5 85 37.6
QL11p023932 Quercus lobata HOM05D008849 ORTHO05D010556 7.3e-08 60.8 87 36.8
Psat1g126640 Pisum sativum HOM05D014907 ORTHO05D010556 6.2e-07 57.8 54 37.0
Actinidia35944 Actinidia chinensis HOM05D008849 ORTHO05D010556 2.3e-06 55.8 84 31.0


User provided reference genes

Program Settings