Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.H00098 Eucalyptus grandis HOM05D006492 ORTHO05D008432 0.0e+00 1737.2 894 100.0
Haze_11549 Corylus avellana HOM05D006492 ORTHO05D008432 9.8e-268 927.2 896 55.2
Dinv38285 Davidia involucrata HOM05D006492 ORTHO05D008432 8.3e-267 924.1 892 55.3
Cfa014875 Carpinus fangiana HOM05D006492 ORTHO05D008432 2.9e-264 915.6 898 54.8
CSS0015325 Camellia sinensis var. sinensis HOM05D006492 ORTHO05D008432 3.5e-257 892.1 879 54.2
Potri.001G053000 Populus trichocarpa HOM05D006492 ORTHO05D008432 7.7e-257 891.0 900 53.8
QL05p063769 Quercus lobata HOM05D006492 ORTHO05D008432 2.3e-256 889.4 896 54.4
Potri.003G175300 Populus trichocarpa HOM05D006492 ORTHO05D008432 7.3e-255 884.4 896 53.6
PGR142G2376 Punica granatum HOM05D006492 ORTHO05D008432 2.8e-254 882.5 895 54.0
TAR365G0379 Trochodendron aralioides HOM05D006492 ORTHO05D008432 1.4e-253 880.2 905 54.4
TAR365G0557 Trochodendron aralioides HOM05D006492 ORTHO05D008432 3.4e-252 875.5 903 54.0
Thecc.04G212600 Theobroma cacao HOM05D006492 ORTHO05D008432 7.5e-252 874.4 895 52.3
Sabra01G0037500 Salix brachista HOM05D006492 ORTHO05D008432 9.2e-250 867.5 896 52.9
CiPaw.01G204100 Carya illinoinensis HOM05D006492 ORTHO05D008432 2.3e-248 862.8 897 53.3
Manes.15G049000 Manihot esculenta HOM05D006492 ORTHO05D008432 5.0e-248 861.7 895 52.0
Prupe.1G060300 Prunus persica HOM05D006492 ORTHO05D008432 2.8e-246 855.9 910 51.2
MD00G1101100 Malus domestica HOM05D006492 ORTHO05D008432 1.8e-245 853.2 909 51.0
Duzib212G0418 Durio zibethinus HOM05D006492 ORTHO05D008432 5.2e-245 851.7 900 51.9
GSVIVG01029042001 Vitis vinifera HOM05D006492 ORTHO05D008432 9.8e-244 847.4 904 50.1
Gohir.D09G053008 Gossypium hirsutum HOM05D006492 ORTHO05D008432 2.2e-243 846.3 900 51.0
Actinidia25080 Actinidia chinensis HOM05D006492 ORTHO05D008432 4.9e-243 845.1 896 51.2
Gorai.006G055600 Gossypium raimondii HOM05D006492 ORTHO05D008432 6.4e-243 844.7 900 50.9
Ciclev10004244m.g Citrus clementina HOM05D006492 ORTHO05D008432 1.4e-242 843.6 894 50.8
COL.COLO4_34090 Corchorus olitorius HOM05D006492 ORTHO05D008432 1.9e-242 843.2 894 50.1
Rhsim09G0049200 Rhododendron simsii HOM05D006492 ORTHO05D008432 4.6e-241 838.6 939 49.2
TWI09G1643 Tripterygium wilfordii HOM05D006492 ORTHO05D008432 5.0e-240 835.1 941 49.2
vmacro00516 Vaccinium macrocarpon HOM05D006492 ORTHO05D008432 1.2e-238 830.5 914 49.5
RcHm_v2.0_Chr4g0396881 Rosa chinensis HOM05D006492 ORTHO05D008432 8.3e-235 817.8 909 50.7
FAN12G2087 Fragaria x ananassa HOM05D006492 ORTHO05D008432 2.7e-233 812.8 909 49.9
FAN22G2187 Fragaria x ananassa HOM05D006492 ORTHO05D008432 4.6e-233 812.0 909 49.8
FAN07G0933 Fragaria x ananassa HOM05D006492 ORTHO05D008432 7.8e-233 811.2 909 50.1
Cpa.g.sc59.86 Carica papaya HOM05D006492 ORTHO05D008432 1.1e-229 800.8 847 51.6
Lju414A5T31 Lonicera japonica HOM05D006492 ORTHO05D008432 9.2e-226 787.7 831 52.8
Peaxi162Scf00047g01324 Petunia axillaris HOM05D006492 ORTHO05D008432 1.6e-225 786.9 896 48.1
Cc03_g07180 Coffea canephora HOM05D006492 ORTHO05D008432 3.9e-224 782.3 909 47.4
CANSAT78G0108 Cannabis sativa HOM05D006492 ORTHO05D008432 8.6e-224 781.2 909 48.2
arahy.Tifrunner.gnm1.ann1.TP3X9S Arachis hypogaea HOM05D006492 ORTHO05D008432 1.5e-223 780.4 893 47.7
FAN17G1964 Fragaria x ananassa HOM05D006492 ORTHO05D008432 9.6e-223 777.7 909 48.6
Nitab4.5_0012325g0010 Nicotiana tabacum HOM05D006492 ORTHO05D008432 1.6e-222 776.9 895 47.5
Sopen09g034300 Solanum pennellii HOM05D006492 ORTHO05D008432 2.8e-222 776.2 897 46.7
Lalb_Chr21g0312661 Lupinus albus HOM05D006492 ORTHO05D008432 1.1e-221 774.2 896 47.9
MSTRG.24638 Avicennia marina HOM05D006492 ORTHO05D008432 2.0e-220 770.0 896 46.2
MBI10_g16832_MAGBIO Magnolia biondii HOM05D006492 ORTHO05D008432 2.2e-219 766.5 897 47.3
Nn1g03104 Nelumbo nucifera HOM05D006492 ORTHO05D008432 2.2e-219 766.5 901 47.2
Nitab4.5_0000493g0030 Nicotiana tabacum HOM05D006492 ORTHO05D008432 2.2e-219 766.5 907 47.0
Glyma.10G192800 Glycine max HOM05D006492 ORTHO05D008432 1.4e-218 763.8 896 47.0
Glyma.20G197700 Glycine max HOM05D006492 ORTHO05D008432 1.2e-217 760.8 894 46.6
Migut.N00332 Erythranthe guttata HOM05D006492 ORTHO05D008432 1.0e-216 757.7 905 46.2
AUR62035934 Chenopodium quinoa HOM05D006492 ORTHO05D008432 1.9e-215 753.4 902 45.8
ECA233G5226 Erigeron canadensis HOM05D006492 ORTHO05D008432 4.3e-215 752.3 890 46.2
EL10Ac3g06781 Beta vulgaris HOM05D006492 ORTHO05D008432 1.3e-214 750.7 897 46.2
Aqoxy2G03837 Aquilegia oxysepala HOM05D006492 ORTHO05D008432 2.8e-214 749.6 902 46.9
Lj5g0018955 Lotus japonicus HOM05D006492 ORTHO05D008432 3.6e-214 749.2 901 46.5
CAN.G1552.5 Capsicum annuum HOM05D006492 ORTHO05D008432 4.8e-214 748.8 877 46.0
Phvul.007G134600 Phaseolus vulgaris HOM05D006492 ORTHO05D008432 4.8e-214 748.8 894 46.5
Hund24849 Selenicereus undatus HOM05D006492 ORTHO05D008432 1.8e-213 746.9 899 46.5
HanXRQChr07g0185861 Helianthus annuus HOM05D006492 ORTHO05D008432 1.3e-211 740.7 891 45.6
Oeu051651.1 Olea europaea HOM05D006492 ORTHO05D008432 4.9e-211 738.8 765 51.1
VMungo0720G0701 Vigna mungo HOM05D006492 ORTHO05D008432 7.1e-210 734.9 896 45.8
SGA_v2.0_scaffold2G00843 Striga asiatica HOM05D006492 ORTHO05D008432 4.6e-209 732.3 905 45.1
ClCG05G003620 Citrullus lanatus HOM05D006492 ORTHO05D008432 1.8e-208 730.3 891 45.8
Sc14g0004710 Simmondsia chinensis HOM05D006492 ORTHO05D008432 2.3e-208 729.9 899 45.9
Ah.04g153340 Amaranthus hybridus HOM05D006492 ORTHO05D008432 5.1e-208 728.8 904 43.9
Medtr1g090050 Medicago truncatula HOM05D006492 ORTHO05D008432 6.7e-208 728.4 916 45.3
TPR.G13408 Trifolium pratense HOM05D006492 ORTHO05D008432 3.6e-206 722.6 923 45.3
Ca_10406_v3 Cicer arietinum L. HOM05D006492 ORTHO05D008432 9.0e-205 718.0 921 46.0
CsaV3_3G011330 Cucumis sativus L. HOM05D006492 ORTHO05D008432 5.8e-204 715.3 905 44.0
Sed0001454 Sechium edule HOM05D006492 ORTHO05D008432 1.7e-203 713.8 897 44.4
THA.LOC104816017 Tarenaya hassleriana HOM05D006492 ORTHO05D008432 6.4e-203 711.8 901 46.3
Psat6g170280 Pisum sativum HOM05D006492 ORTHO05D008432 3.0e-200 703.0 917 44.3
DCAR_002278 Daucus carota HOM05D006492 ORTHO05D008432 2.5e-199 699.9 908 43.9
SalBow3G2597 Salvia bowleyana HOM05D006492 ORTHO05D008432 1.4e-197 694.1 922 43.5
CARHR004030 Cardamine hirsuta HOM05D006492 ORTHO05D008432 6.9e-197 691.8 894 43.4
Sp1g03490 Schrenkiella parvula HOM05D006492 ORTHO05D008432 9.0e-197 691.4 895 44.6
Lsat_1_v5_gn_6_62680 Lactuca sativa HOM05D006492 ORTHO05D008432 2.9e-195 686.4 893 42.7
BolC8t46943H Brassica oleracea HOM05D006492 ORTHO05D008432 5.5e-194 682.2 901 43.3
C08p01350 Brassica napus HOM05D006492 ORTHO05D008432 9.3e-194 681.4 901 43.3
A08p36780 Brassica napus HOM05D006492 ORTHO05D008432 7.9e-193 678.3 900 43.3
unitig_899.g15531 Utricularia gibba HOM05D006492 ORTHO05D008432 1.0e-192 677.9 876 42.5
AT1G04650 Arabidopsis thaliana HOM05D006492 ORTHO05D008432 2.3e-192 676.8 902 42.8
Carub.0001s0390 Capsella rubella HOM05D006492 ORTHO05D008432 3.9e-192 676.0 894 43.3
AL1G14360 Arabidopsis lyrata HOM05D006492 ORTHO05D008432 5.1e-192 675.6 899 42.6
BraA08t35581Z Brassica rapa HOM05D006492 ORTHO05D008432 8.7e-192 674.9 900 43.4
Thhalv10006668m.g Eutrema salsugineum HOM05D006492 ORTHO05D008432 7.4e-191 671.8 923 42.1
A10p03080 Brassica napus HOM05D006492 ORTHO05D008432 1.3e-190 671.0 899 42.9
BcaC07g36892 Brassica carinata HOM05D006492 ORTHO05D008432 2.6e-188 663.3 901 42.6
ATR0787G047 Amborella trichopoda HOM05D006492 ORTHO05D008432 5.5e-186 655.6 921 40.8
PSO017G3024 Papaver somniferum HOM05D006492 ORTHO05D008432 1.9e-183 647.1 948 42.7
PSO063G2396 Papaver somniferum HOM05D006492 ORTHO05D008432 4.8e-182 642.5 941 42.9
Aa31LG1G20220 Aethionema arabicum HOM05D006492 ORTHO05D008432 5.3e-181 639.0 923 40.8
Atru.chr4.1802 Acer truncatum HOM05D006492 ORTHO05D008432 6.9e-181 638.6 653 51.9
MELO3C006341.2 Cucumis melo HOM05D006492 ORTHO05D008432 9.1e-181 638.3 815 42.9
CDE04G0311 Ceratophyllum demersum HOM05D006492 ORTHO05D008432 3.2e-162 576.6 835 38.8
vmacro22821 Vaccinium macrocarpon HOM05D006492 ORTHO05D008432 2.0e-159 567.4 945 39.4
FvH4_4g05680 Fragaria vesca HOM05D006492 ORTHO05D008432 9.1e-149 531.9 600 49.0
SHI00019 Sapria himalayana HOM05D006492 ORTHO05D000009 1.2e-148 531.6 872 38.1
Zm00001eb003580 Zea mays HOM05D006492 ORTHO05D008432 1.9e-146 524.2 910 35.9
Os03g0144000 Oryza sativa ssp. japonica HOM05D006492 ORTHO05D008432 8.0e-137 492.3 934 34.2
SEGI_21616 Sequoiadendron giganteum HOM05D006492 ORTHO05D008432 3.5e-132 476.9 921 34.0
Solyc09g091370.4 Solanum lycopersicum HOM05D006492 ORTHO05D008432 2.3e-128 464.2 575 44.5
BraA10t42581Z Brassica rapa HOM05D006492 ORTHO05D008432 2.0e-119 434.5 690 38.6
HPP92_025560 Vanilla planifolia HOM05D006492 ORTHO05D008432 7.7e-55 219.9 319 43.3
Pp3c16_18660 Physcomitrium patens HOM05D006492 ORTHO05D008432 6.5e-54 216.9 887 25.3
HPP92_025559 Vanilla planifolia HOM05D006492 ORTHO05D008432 5.5e-45 187.2 346 32.7
SMO117G0361 Selaginella moellendorffii HOM05D006492 ORTHO05D008432 4.8e-41 174.1 724 24.0
Mapoly0061s0085 Marchantia polymorpha HOM05D006492 ORTHO05D008432 3.7e-33 147.9 444 27.9
arahy.Tifrunner.gnm1.ann1.LCJ3P1 Arachis hypogaea HOM05D006492 ORTHO05D008432 1.1e-32 146.4 221 38.5
AagrBONN_evm.TU.Sc2ySwM_117.2272 Anthoceros agrestis HOM05D006492 ORTHO05D008432 4.1e-24 117.9 563 24.7
C05p02850 Brassica napus HOM05D006492 ORTHO05D008432 1.1e-16 93.2 138 41.3
CBR_g61877 Chara braunii HOM05D006492 ORTHO05D008432 1.9e-13 82.4 850 19.9
Atru.chr4.1801 Acer truncatum HOM05D006492 ORTHO05D008432 8.9e-11 73.6 80 52.5
BcaC07g36900 Brassica carinata HOM05D006492 ORTHO05D008432 2.1e-07 62.4 89 40.4
Lju414A5G29 Lonicera japonica HOM05D006492 ORTHO05D008432 3.5e-07 61.6 67 50.7
Nitab4.5_0005468g0040 Nicotiana tabacum HOM05D001280 ORTHO05D008432 3.9e-06 58.2 104 34.6


User provided reference genes

Program Settings