Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.H00073 Eucalyptus grandis HOM05D000880 ORTHO05D009684 6.7e-116 422.2 309 100.0
PGR044G0315 Punica granatum HOM05D000880 ORTHO05D009684 1.0e-39 169.1 309 56.3
QL12p024656 Quercus lobata HOM05D000880 ORTHO05D009684 2.8e-29 134.4 319 53.0
Manes.07G088100 Manihot esculenta HOM05D000880 ORTHO05D009684 1.8e-28 131.7 300 52.0
Cpa.g.sc10.206 Carica papaya HOM05D000880 ORTHO05D009684 6.9e-28 129.8 312 54.2
Actinidia06447 Actinidia chinensis HOM05D000880 ORTHO05D009684 1.5e-27 128.6 297 52.9
MD08G1133900 Malus domestica HOM05D000880 ORTHO05D009684 5.8e-27 126.7 314 51.9
Lalb_Chr03g0032741 Lupinus albus HOM05D000880 ORTHO05D009684 1.3e-26 125.6 314 50.3
Cfa013251 Carpinus fangiana HOM05D000880 ORTHO05D008158 4.9e-26 123.6 296 53.4
arahy.Tifrunner.gnm1.ann1.D3X7TW Arachis hypogaea HOM05D005666 ORTHO05D007183 1.9e-25 121.7 177 36.7
Prupe.1G462500 Prunus persica HOM05D000880 ORTHO05D009684 4.2e-25 120.6 318 51.3
Haze_21694 Corylus avellana HOM05D000880 ORTHO05D009684 9.3e-25 119.4 239 61.9
Ciclev10007859m.g Citrus clementina HOM05D000880 ORTHO05D009684 1.6e-24 118.6 307 52.8
arahy.Tifrunner.gnm1.ann1.CHY0RW Arachis hypogaea HOM05D000880 ORTHO05D009684 2.1e-24 118.2 177 36.2
CiPaw.07G214800 Carya illinoinensis HOM05D000880 ORTHO05D009684 2.1e-24 118.2 310 51.0
Thecc.09G004700 Theobroma cacao HOM05D000880 ORTHO05D009684 1.3e-23 115.5 175 38.9
CSS0007644 Camellia sinensis var. sinensis HOM05D000880 ORTHO05D009684 1.8e-23 115.2 290 52.4
Rhsim04G0217100 Rhododendron simsii HOM05D000880 ORTHO05D009684 1.8e-23 115.2 297 54.9
Atru.chr7.2671 Acer truncatum HOM05D000880 ORTHO05D009684 2.3e-23 114.8 308 49.0
Dinv15656 Davidia involucrata HOM05D000880 ORTHO05D009684 8.7e-23 112.8 300 51.3
Lj4A910T18 Lonicera japonica HOM05D000880 ORTHO05D009684 2.5e-22 111.3 301 54.2
Lj6C69T3 Lonicera japonica HOM05D000880 ORTHO05D009684 2.5e-22 111.3 289 52.6
Sabra18G0001200 Salix brachista HOM05D000880 ORTHO05D009684 4.3e-22 110.5 313 50.2
Sabra18G0010100 Salix brachista HOM05D000880 ORTHO05D009684 7.4e-22 109.8 313 50.2
FAN20G2124 Fragaria x ananassa HOM05D000880 ORTHO05D009684 1.6e-21 108.6 282 51.4
vmacro08195 Vaccinium macrocarpon HOM05D000880 ORTHO05D009684 2.8e-21 107.8 310 54.2
Medtr1g010020 Medicago truncatula HOM05D000880 ORTHO05D009684 4.8e-21 107.1 297 51.9
Potri.018G004400 Populus trichocarpa HOM05D000880 ORTHO05D009684 1.1e-20 105.9 317 48.9
RcHm_v2.0_Chr6g0312241 Rosa chinensis HOM05D000880 ORTHO05D009684 2.0e-19 101.7 156 36.5
CANSAT78G1387 Cannabis sativa HOM05D000880 ORTHO05D009684 3.4e-19 100.9 313 47.9
FAN24G3119 Fragaria x ananassa HOM05D000880 ORTHO05D009684 3.4e-19 100.9 157 35.7
Phvul.011G207000 Phaseolus vulgaris HOM05D000880 ORTHO05D009684 7.6e-19 99.8 291 52.2
Psat6g031840 Pisum sativum HOM05D000880 ORTHO05D009684 7.6e-19 99.8 305 48.5
ClCG08G012780 Citrullus lanatus HOM05D006422 ORTHO05D007992 2.2e-18 98.2 299 49.5
MELO3C011202.2 Cucumis melo HOM05D000880 ORTHO05D009684 2.2e-18 98.2 299 49.5
EL10Ac6g15284 Beta vulgaris HOM05D000880 ORTHO05D009684 2.9e-18 97.8 224 63.8
TPR.G12115 Trifolium pratense HOM05D000880 ORTHO05D009684 4.9e-18 97.1 306 43.1
FAN27G3148 Fragaria x ananassa HOM05D000880 ORTHO05D009684 2.5e-17 94.7 226 59.7
Sed0004667 Sechium edule HOM05D000880 ORTHO05D009684 4.2e-17 94.0 298 44.6
Ca_12883_v3 Cicer arietinum L. HOM05D000880 ORTHO05D009684 5.5e-17 93.6 229 53.7
FvH4_2g30660 Fragaria vesca HOM05D000880 ORTHO05D009684 2.1e-16 91.7 88 48.9
Lsat_1_v5_gn_5_33201 Lactuca sativa HOM05D000880 ORTHO05D009684 3.5e-16 90.9 111 43.2
Lj3g0007027 Lotus japonicus HOM05D000880 ORTHO05D009684 1.0e-15 89.4 179 31.8
Hund04480 Selenicereus undatus HOM05D000880 ORTHO05D009684 1.0e-15 89.4 90 43.3
CsaV3_2G031530 Cucumis sativus L. HOM05D000880 ORTHO05D009684 1.8e-15 88.6 233 58.4
Haze_10332 Corylus avellana HOM05D000880 ORTHO05D009684 5.1e-15 87.0 197 64.0
Thhalv10003880m.g Eutrema salsugineum HOM05D000880 ORTHO05D009684 8.7e-15 86.3 175 31.4
AUR62017906 Chenopodium quinoa HOM05D000880 ORTHO05D009684 1.1e-14 85.9 228 48.2
Aa31LG10G9610 Aethionema arabicum HOM05D000880 ORTHO05D009684 1.5e-14 85.5 199 29.6
Sc07g0001710 Simmondsia chinensis HOM05D000880 ORTHO05D009684 1.5e-14 85.5 117 37.6
Nn8g39798 Nelumbo nucifera HOM05D000880 ORTHO05D009684 1.9e-14 85.1 227 60.8
Sp2g22620 Schrenkiella parvula HOM05D000880 ORTHO05D009684 1.9e-14 85.1 175 30.9
TAR626G1204 Trochodendron aralioides HOM05D000880 ORTHO05D009684 2.5e-14 84.7 281 50.2
Aa31LG10G9680 Aethionema arabicum HOM05D000880 ORTHO05D009684 3.3e-14 84.3 292 50.0
Glyma.13G197400 Glycine max HOM05D000880 ORTHO05D009684 3.3e-14 84.3 290 43.8
HanXRQChr07g0202221 Helianthus annuus HOM05D000880 ORTHO05D009684 3.3e-14 84.3 99 46.5
VMungo1127G1257 Vigna mungo HOM05D000880 ORTHO05D009684 4.3e-14 84.0 294 48.0
AUR62003593 Chenopodium quinoa HOM05D000880 ORTHO05D009684 5.7e-14 83.6 223 49.3
Carub.0006s2268 Capsella rubella HOM05D000880 ORTHO05D009684 2.8e-13 81.3 169 32.5
CARHR188620 Cardamine hirsuta HOM05D000880 ORTHO05D009684 3.7e-13 80.9 175 32.0
Nitab4.5_0000502g0180 Nicotiana tabacum HOM05D000880 ORTHO05D009684 3.7e-13 80.9 304 47.0
AT5G24830 Arabidopsis thaliana HOM05D000880 ORTHO05D009684 6.3e-13 80.1 170 30.6
ECA232G0576 Erigeron canadensis HOM05D000880 ORTHO05D009684 6.3e-13 80.1 119 37.0
Migut.E01433 Erythranthe guttata HOM05D000880 ORTHO05D009684 1.1e-12 79.3 254 53.9
C07p42940 Brassica napus HOM05D000880 ORTHO05D009684 1.8e-12 78.6 174 30.5
BolC7t44823H Brassica oleracea HOM05D000880 ORTHO05D009684 1.8e-12 78.6 171 30.4
MD15G1110300 Malus domestica HOM05D000880 ORTHO05D009684 2.4e-12 78.2 173 67.6
AL6G36470 Arabidopsis lyrata HOM05D000880 ORTHO05D009684 4.1e-12 77.4 169 32.0
A06p35600 Brassica napus HOM05D000880 ORTHO05D009684 4.1e-12 77.4 176 30.1
vmacro08192 Vaccinium macrocarpon HOM05D000880 ORTHO05D009684 5.3e-12 77.0 297 46.5
Peaxi162Scf00288g01016 Petunia axillaris HOM05D000880 ORTHO05D009684 1.2e-11 75.9 304 49.3
SalBow8G2909 Salvia bowleyana HOM05D004918 ORTHO05D005706 1.2e-11 75.9 210 58.6
ECA236G3570 Erigeron canadensis HOM05D000705 ORTHO05D002970 2.0e-11 75.1 79 48.1
Nitab4.5_0001956g0020 Nicotiana tabacum HOM05D000880 ORTHO05D009684 3.4e-11 74.3 214 63.6
Ah.02g121750 Amaranthus hybridus HOM05D000880 ORTHO05D009684 7.6e-11 73.2 226 56.6
BraA06t26485Z Brassica rapa HOM05D000880 ORTHO05D009684 1.0e-10 72.8 175 29.1
MBI13_g01685_MAGBIO Magnolia biondii HOM05D000880 ORTHO05D001950 1.0e-10 72.8 102 37.3
Oeu040613.1 Olea europaea HOM05D000880 ORTHO05D009684 1.0e-10 72.8 179 30.7
GSVIVG01003996001 Vitis vinifera HOM05D000880 ORTHO05D009684 1.3e-10 72.4 195 61.5
Cc08_g06370 Coffea canephora HOM05D000880 ORTHO05D009684 1.7e-10 72.0 181 31.5
Solyc03g120070.4 Solanum lycopersicum HOM05D000880 ORTHO05D009684 1.7e-10 72.0 319 48.9
PGSC0003DMG400005692 Solanum tuberosum HOM05D000880 ORTHO05D009684 6.5e-10 70.1 315 50.8
Aqoxy5G01876 Aquilegia oxysepala HOM05D000880 ORTHO05D009684 1.1e-09 69.3 120 35.8
Sopen03g038940 Solanum pennellii HOM05D000880 ORTHO05D009684 1.9e-09 68.6 312 51.3
Cpa.g.sc10.208 Carica papaya HOM05D000880 ORTHO05D009684 2.5e-09 68.2 72 47.2
BcaNung01260 Brassica carinata HOM05D000880 ORTHO05D009684 3.2e-09 67.8 174 29.3
MSTRG.13951 Avicennia marina HOM05D000880 ORTHO05D009684 4.2e-09 67.4 205 62.9
HPP92_017364 Vanilla planifolia HOM05D003382 ORTHO05D003930 5.5e-09 67.0 126 30.2
SGA_v2.0_scaffold121G33022 Striga asiatica HOM05D000880 ORTHO05D009684 1.2e-08 65.9 162 29.6
Glyma.15G236000 Glycine max HOM05D000880 ORTHO05D009684 7.9e-08 63.2 184 50.5
PSO017G1147 Papaver somniferum HOM05D000880 ORTHO05D001950 1.9e-06 58.5 101 36.6
CSS0003109 Camellia sinensis var. sinensis HOM05D000880 ORTHO05D009684 5.7e-06 57.0 97 36.1
CiPaw.15G081300 Carya illinoinensis HOM05D000880 ORTHO05D009684 7.4e-06 56.6 101 33.7


User provided reference genes

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