Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.H00040 Eucalyptus grandis HOM05D004598 ORTHO05D005550 2.5e-278 961.4 475 100.0
PGR004G0790 Punica granatum HOM05D004598 ORTHO05D005550 1.1e-190 670.2 433 76.4
CiPaw.13G015900 Carya illinoinensis HOM05D004598 ORTHO05D005550 1.2e-184 650.2 437 72.5
TWI18G0003 Tripterygium wilfordii HOM05D004598 ORTHO05D005550 4.5e-179 631.7 432 71.3
TAR624G0541 Trochodendron aralioides HOM05D004598 ORTHO05D005550 2.2e-178 629.4 436 70.0
Atru.chr3.3248 Acer truncatum HOM05D004598 ORTHO05D005550 5.0e-178 628.2 434 69.6
CSS0038935 Camellia sinensis var. sinensis HOM05D004598 ORTHO05D005550 1.1e-177 627.1 440 70.9
CSS0039662 Camellia sinensis var. sinensis HOM05D004598 ORTHO05D005550 1.1e-177 627.1 440 70.9
Sopen02g028050 Solanum pennellii HOM05D004598 ORTHO05D005550 4.2e-177 625.2 440 70.2
Phvul.005G043300 Phaseolus vulgaris HOM05D004598 ORTHO05D005550 7.2e-177 624.4 435 70.3
Ca_23979_v3 Cicer arietinum L. HOM05D004598 ORTHO05D005550 1.2e-176 623.6 437 70.7
vmacro20477 Vaccinium macrocarpon HOM05D004598 ORTHO05D005550 2.1e-176 622.9 474 67.5
CSS0010665 Camellia sinensis var. sinensis HOM05D004598 ORTHO05D005550 4.7e-176 621.7 438 70.5
VMungo1080G1126 Vigna mungo HOM05D004598 ORTHO05D005550 7.9e-176 620.9 436 70.4
Actinidia02429 Actinidia chinensis HOM05D004598 ORTHO05D005550 1.4e-175 620.2 439 71.3
Hma1.2p1_0315F.1_g122700 Hydrangea macrophylla HOM05D004598 ORTHO05D005550 1.4e-175 620.2 421 73.2
Gorai.001G088100 Gossypium raimondii HOM05D004598 ORTHO05D005550 1.8e-175 619.8 422 71.6
Sabra01G0022600 Salix brachista HOM05D004598 ORTHO05D005550 2.3e-175 619.4 437 70.0
Solyc02g083260.3 Solanum lycopersicum HOM05D004598 ORTHO05D005550 2.3e-175 619.4 440 70.0
COL.COLO4_05992 Corchorus olitorius HOM05D004598 ORTHO05D005550 3.0e-175 619.0 423 70.9
Peaxi162Scf00300g00120 Petunia axillaris HOM05D004598 ORTHO05D005550 3.0e-175 619.0 432 71.3
Potri.001G031500 Populus trichocarpa HOM05D004598 ORTHO05D005550 5.2e-175 618.2 437 70.0
Lj3g0020284 Lotus japonicus HOM05D004598 ORTHO05D005550 1.5e-174 616.7 436 70.6
HanXRQChr03g0066861 Helianthus annuus HOM05D004598 ORTHO05D005550 2.0e-174 616.3 433 69.5
PGSC0003DMG400001580 Solanum tuberosum HOM05D004598 ORTHO05D005550 2.0e-174 616.3 439 69.5
Thecc.04G114500 Theobroma cacao HOM05D004598 ORTHO05D005550 2.0e-174 616.3 422 70.9
Gohir.D07G082500 Gossypium hirsutum HOM05D004598 ORTHO05D005550 3.3e-174 615.5 422 71.3
Sp6g23050 Schrenkiella parvula HOM05D004598 ORTHO05D005550 5.7e-174 614.8 427 71.2
Gohir.A07G077700 Gossypium hirsutum HOM05D004598 ORTHO05D005550 7.4e-174 614.4 422 70.9
TPR.G8530 Trifolium pratense HOM05D004598 ORTHO05D005550 7.4e-174 614.4 439 69.5
Aqoxy3G01530 Aquilegia oxysepala HOM05D004598 ORTHO05D005550 1.3e-173 613.6 443 67.3
Cc07_g11450 Coffea canephora HOM05D004598 ORTHO05D005550 1.3e-173 613.6 439 68.3
SalBow6G7131 Salvia bowleyana HOM05D004598 ORTHO05D005550 1.7e-173 613.2 432 69.0
Manes.14G169500 Manihot esculenta HOM05D004598 ORTHO05D005550 3.7e-173 612.1 431 68.9
CARHR191400 Cardamine hirsuta HOM05D004598 ORTHO05D005550 8.2e-173 610.9 436 69.5
Aqoxy3G01523 Aquilegia oxysepala HOM05D004598 ORTHO05D005550 1.8e-172 609.8 419 69.7
SalBow2G2153 Salvia bowleyana HOM05D004598 ORTHO05D005550 2.4e-172 609.4 433 68.4
Aqoxy6G02901 Aquilegia oxysepala HOM05D004598 ORTHO05D005550 7.0e-172 607.8 435 67.4
Thhalv10013575m.g Eutrema salsugineum HOM05D004598 ORTHO05D005550 4.5e-171 605.1 434 69.4
Medtr8g040610 Medicago truncatula HOM05D004598 ORTHO05D005550 4.5e-171 605.1 437 68.6
MSTRG.2598 Avicennia marina HOM05D004598 ORTHO05D005550 5.9e-171 604.7 439 67.4
Duzib133G0026 Durio zibethinus HOM05D004598 ORTHO05D005550 5.9e-171 604.7 476 64.9
Lalb_Chr01g0007411 Lupinus albus HOM05D004598 ORTHO05D005550 1.0e-170 604.0 438 68.9
CAN.G890.18 Capsicum annuum HOM05D004598 ORTHO05D005550 2.2e-170 602.8 441 68.0
Aa31LG1G13300 Aethionema arabicum HOM05D004598 ORTHO05D005550 3.8e-170 602.1 442 67.0
AL6G33110 Arabidopsis lyrata HOM05D004598 ORTHO05D005550 3.8e-170 602.1 461 65.3
Migut.H02299 Erythranthe guttata HOM05D004598 ORTHO05D005550 3.8e-170 602.1 442 68.3
Ah.03g134220 Amaranthus hybridus HOM05D004598 ORTHO05D005550 5.0e-170 601.7 424 69.1
BcaC03g13863 Brassica carinata HOM05D004598 ORTHO05D005550 1.1e-169 600.5 418 70.6
Carub.0006s1977 Capsella rubella HOM05D004598 ORTHO05D005550 3.2e-169 599.0 435 68.5
AT5G22130 Arabidopsis thaliana HOM05D004598 ORTHO05D005550 4.2e-169 598.6 451 66.7
Glyma.08G159600 Glycine max HOM05D004598 ORTHO05D005550 1.6e-168 596.7 436 68.3
MBI19_g29897_MAGBIO Magnolia biondii HOM05D004598 ORTHO05D005550 1.6e-168 596.7 442 67.6
Nitab4.5_0004259g0040 Nicotiana tabacum HOM05D004598 ORTHO05D005550 2.1e-168 596.3 502 61.8
Sc16g0001780 Simmondsia chinensis HOM05D004598 ORTHO05D005550 2.1e-168 596.3 427 68.1
GSVIVG01017167001 Vitis vinifera HOM05D004598 ORTHO05D005550 2.1e-168 596.3 406 72.4
Prupe.8G170900 Prunus persica HOM05D004598 ORTHO05D005550 2.7e-168 595.9 431 68.4
AUR62026210 Chenopodium quinoa HOM05D004598 ORTHO05D005550 4.7e-168 595.1 422 68.2
PSO675G4488 Papaver somniferum HOM05D004598 ORTHO05D005550 1.0e-167 594.0 481 62.6
BcaB05g22747 Brassica carinata HOM05D004598 ORTHO05D005550 1.8e-167 593.2 417 70.7
C02p10690 Brassica napus HOM05D004598 ORTHO05D005550 2.3e-167 592.8 417 70.7
THA.LOC104799567 Tarenaya hassleriana HOM05D004598 ORTHO05D005550 4.0e-167 592.0 437 68.4
FAN27G3211 Fragaria x ananassa HOM05D004598 ORTHO05D005550 8.8e-167 590.9 431 67.5
BolC2t07140H Brassica oleracea HOM05D004598 ORTHO05D005550 1.2e-166 590.5 418 70.8
FAN15G2177 Fragaria x ananassa HOM05D004598 ORTHO05D005550 1.5e-166 590.1 431 67.5
BraA02t05641Z Brassica rapa HOM05D004598 ORTHO05D005550 2.6e-166 589.3 418 70.1
RcHm_v2.0_Chr6g0279191 Rosa chinensis HOM05D004598 ORTHO05D005550 9.7e-166 587.4 426 68.5
FvH4_2g15820 Fragaria vesca HOM05D004598 ORTHO05D005550 2.8e-165 585.9 428 68.0
MBI02_g31690_MAGBIO Magnolia biondii HOM05D004598 ORTHO05D005550 3.7e-165 585.5 440 66.6
Cpa.g.sc9.382 Carica papaya HOM05D004598 ORTHO05D005550 8.2e-165 584.3 469 64.2
CsaV3_7G001350 Cucumis sativus L. HOM05D004598 ORTHO05D005550 3.1e-164 582.4 423 68.8
MELO3C013319.2 Cucumis melo HOM05D004598 ORTHO05D005550 1.2e-163 580.5 438 67.1
Hund05921 Selenicereus undatus HOM05D004598 ORTHO05D005550 1.2e-163 580.5 420 67.1
MD05G1127200 Malus domestica HOM05D004598 ORTHO05D005550 1.0e-162 577.4 435 65.5
Rhsim11G0148800 Rhododendron simsii HOM05D004598 ORTHO05D005550 2.2e-162 576.2 438 67.6
ATR0165G018 Amborella trichopoda HOM05D004598 ORTHO05D005550 2.1e-160 569.7 446 63.9
ClCG02G003800 Citrullus lanatus HOM05D004598 ORTHO05D005550 2.1e-160 569.7 433 66.5
HanXRQChr14g0454151 Helianthus annuus HOM05D004598 ORTHO05D005550 2.3e-159 566.2 393 70.0
Ciclev10001079m.g Citrus clementina HOM05D004598 ORTHO05D005550 2.8e-157 559.3 444 63.5
Haze_02994 Corylus avellana HOM05D006110 ORTHO05D007774 6.3e-157 558.1 419 67.1
Dinv08542 Davidia involucrata HOM05D004598 ORTHO05D005550 1.5e-153 547.0 410 67.6
Aqoxy3G00619 Aquilegia oxysepala HOM05D004598 ORTHO05D005550 1.0e-151 540.8 435 62.3
Medtr1g058230 Medicago truncatula HOM05D004598 ORTHO05D005550 4.4e-150 535.4 423 64.3
AUR62026384 Chenopodium quinoa HOM05D004598 ORTHO05D005550 1.9e-145 520.0 379 65.4
BcaC07g41302 Brassica carinata HOM05D004598 ORTHO05D005550 2.5e-145 519.6 412 64.6
BolC8t51865H Brassica oleracea HOM05D004598 ORTHO05D005550 1.2e-144 517.3 410 64.6
HPP92_002259 Vanilla planifolia HOM05D004598 ORTHO05D005550 1.2e-144 517.3 390 65.1
TPR.G6064 Trifolium pratense HOM05D004598 ORTHO05D005550 2.8e-144 516.2 436 61.5
Oeu046543.3 Olea europaea HOM05D004598 ORTHO05D005550 1.4e-143 513.8 410 65.4
QL11p052661 Quercus lobata HOM05D004598 ORTHO05D005550 2.3e-143 513.1 447 59.1
arahy.Tifrunner.gnm1.ann1.K5F1ZR Arachis hypogaea HOM05D004598 ORTHO05D005550 2.5e-137 493.0 365 66.6
arahy.Tifrunner.gnm1.ann1.B5R5MF Arachis hypogaea HOM05D004598 ORTHO05D005550 8.0e-136 488.0 334 71.0
Cfa010950 Carpinus fangiana HOM05D006110 ORTHO05D007774 6.8e-135 485.0 334 72.8
Hma1.2p1_0315F.1_g122690 Hydrangea macrophylla HOM05D004598 ORTHO05D005550 1.5e-134 483.8 343 71.4
SEGI_01084 Sequoiadendron giganteum HOM05D004598 ORTHO05D005550 2.0e-134 483.4 377 63.7
EL10Ac6g13343 Beta vulgaris HOM05D004598 ORTHO05D005550 6.4e-133 478.4 424 58.7
Nitab4.5_0001696g0090 Nicotiana tabacum HOM05D004598 ORTHO05D005550 3.0e-130 469.5 418 58.9
AagrBONN_evm.TU.Sc2ySwM_368.2499 Anthoceros agrestis HOM05D004598 ORTHO05D005550 1.1e-129 467.6 414 57.7
arahy.Tifrunner.gnm1.ann1.PEW2A9 Arachis hypogaea HOM05D004598 ORTHO05D005550 1.1e-129 467.6 345 67.0
Os03g0670200 Oryza sativa ssp. japonica HOM05D004598 ORTHO05D005550 2.1e-128 463.4 367 62.1
CDE02G1977 Ceratophyllum demersum HOM05D004598 ORTHO05D005550 1.8e-127 460.3 368 61.7
Mapoly0079s0001 Marchantia polymorpha HOM05D004598 ORTHO05D005550 2.7e-123 446.4 415 52.5
Pp3c1_29840 Physcomitrium patens HOM05D004598 ORTHO05D005550 1.3e-122 444.1 415 54.2
Lj2A487T63 Lonicera japonica HOM05D004598 ORTHO05D005550 3.6e-120 436.0 455 52.3
Sed0007699 Sechium edule HOM05D004598 ORTHO05D005550 2.4e-119 433.3 344 65.4
SGA_v2.0_scaffold195G40853 Striga asiatica HOM05D004598 ORTHO05D003143 4.0e-119 432.6 321 65.7
SMO118G0414 Selaginella moellendorffii HOM05D004598 ORTHO05D005550 9.2e-116 421.4 416 54.8
vmacro22733 Vaccinium macrocarpon HOM05D004598 ORTHO05D005550 7.6e-110 401.7 436 51.4
DCAR_027631 Daucus carota HOM05D004598 ORTHO05D005550 9.9e-110 401.4 312 65.7
Migut.H02295 Erythranthe guttata HOM05D004598 ORTHO05D005550 2.5e-105 386.7 346 59.5
arahy.Tifrunner.gnm1.ann1.BN9D0T Arachis hypogaea HOM05D004598 ORTHO05D005550 5.1e-98 362.5 368 54.1
CBR_g41686 Chara braunii HOM05D004598 ORTHO05D005550 5.1e-98 362.5 575 38.1
Migut.H02297 Erythranthe guttata HOM05D004598 ORTHO05D005550 6.7e-98 362.1 290 63.8
C08p43090 Brassica napus HOM05D004598 ORTHO05D005550 2.8e-96 356.7 288 63.5
Gohir.A11G320400 Gossypium hirsutum HOM05D004598 ORTHO05D005550 1.4e-95 354.4 376 51.6
CSS0036727 Camellia sinensis var. sinensis HOM05D004598 ORTHO05D005550 5.6e-89 332.4 248 67.7
unitig_736.g22586 Utricularia gibba HOM05D004598 ORTHO05D005550 8.4e-85 318.5 270 56.7
Manes.07G140750 Manihot esculenta HOM05D004598 ORTHO05D005550 1.6e-83 314.3 279 59.1
ECA240G3480 Erigeron canadensis HOM05D004598 ORTHO05D005550 1.9e-81 307.4 212 69.8
Lsat_1_v5_gn_9_118221 Lactuca sativa HOM05D004598 ORTHO05D005550 9.7e-81 305.1 429 41.7
Thhalv10015361m.g Eutrema salsugineum HOM05D004598 ORTHO05D005550 1.6e-80 304.3 234 65.4
FAN20G2148 Fragaria x ananassa HOM05D004598 ORTHO05D005550 1.2e-78 298.1 427 41.0
SHI34561 Sapria himalayana HOM05D004598 ORTHO05D005550 2.6e-78 297.0 427 42.2
Actinidia00342 Actinidia chinensis HOM05D004598 ORTHO05D005550 3.8e-77 293.1 353 48.4
SGA_v2.0_scaffold108G30913 Striga asiatica HOM05D004598 ORTHO05D005550 1.4e-76 291.2 403 43.4
Nn2g12459 Nelumbo nucifera HOM05D004598 ORTHO05D005550 1.1e-65 255.0 160 75.6
Cre14.g616200 Chlamydomonas reinhardtii HOM05D004598 ORTHO05D005550 9.7e-65 251.9 469 35.2
Zm00001eb096280 Zea mays HOM05D004598 ORTHO05D005550 1.3e-64 251.5 215 59.1
CSS0012948 Camellia sinensis var. sinensis HOM05D004598 ORTHO05D005550 8.2e-64 248.8 159 73.6
Psat6g012400 Pisum sativum HOM05D004598 ORTHO05D005550 3.1e-63 246.9 150 78.0
MD10G1130600 Malus domestica HOM05D004598 ORTHO05D005550 5.3e-63 246.1 233 55.4
Rhsim11G0028900 Rhododendron simsii HOM05D004598 ORTHO05D005550 6.9e-63 245.7 360 40.8
BNapus_Darmor_BZH_scaffold_38p00840 Brassica napus HOM05D004598 ORTHO05D005550 2.1e-59 234.2 156 71.8
MCO01G023 Micromonas commoda HOM05D004598 ORTHO05D005550 8.2e-56 222.2 414 36.5
Cfa027243 Carpinus fangiana HOM05D004598 ORTHO05D005550 1.0e-53 215.3 420 34.8
FAN24G1674 Fragaria x ananassa HOM05D004598 ORTHO05D005550 3.8e-53 213.4 167 64.7
TAR160G0002 Trochodendron aralioides HOM05D004598 ORTHO05D005550 7.2e-52 209.1 181 59.7
vmacro01928 Vaccinium macrocarpon HOM05D004598 ORTHO05D005550 1.6e-51 208.0 148 70.9
MD10G1130700 Malus domestica HOM05D004598 ORTHO05D005550 6.1e-51 206.1 142 67.6
BolC9t58552H Brassica oleracea HOM05D004598 ORTHO05D005550 2.0e-49 201.1 257 47.9
Dinv26897 Davidia involucrata HOM05D004598 ORTHO05D005550 3.5e-46 190.3 124 72.6
Lj2E933T1 Lonicera japonica HOM05D004598 ORTHO05D005550 4.2e-44 183.3 111 78.4
vmacro20475 Vaccinium macrocarpon HOM05D004598 ORTHO05D005550 5.7e-33 146.4 117 63.2
vmacro22736 Vaccinium macrocarpon HOM05D004598 ORTHO05D005550 1.3e-32 145.2 120 61.7
BcaB01g04740 Brassica carinata HOM05D004598 ORTHO05D005550 3.5e-30 137.1 128 60.2
MELO3C010621.2 Cucumis melo HOM05D004598 ORTHO05D005550 3.4e-25 120.6 79 69.6
PRCOL_00005536 Prasinoderma coloniale HOM05D004598 ORTHO05D005550 7.5e-25 119.4 423 27.2
Rhsim09G0084000 Rhododendron simsii HOM05D004598 ORTHO05D005550 4.6e-22 110.2 61 83.6
SHI43372 Sapria himalayana HOM05D004598 ORTHO05D005550 1.4e-15 88.6 334 26.9
SHI44717 Sapria himalayana HOM05D004598 ORTHO05D005550 2.5e-12 77.8 124 41.9
SHI39035 Sapria himalayana HOM05D004598 ORTHO05D005550 1.4e-10 72.0 63 58.7
CAN.G890.17 Capsicum annuum HOM05D004598 ORTHO05D005550 8.9e-10 69.3 59 59.3
SHI53813 Sapria himalayana HOM05D004598 ORTHO05D005550 1.2e-09 68.9 62 50.0
Medtr6g051670 Medicago truncatula HOM05D004598 ORTHO05D005550 1.5e-09 68.6 48 60.4
SHI53927 Sapria himalayana HOM05D004598 ORTHO05D005550 1.5e-09 68.6 62 50.0
SHI39037 Sapria himalayana HOM05D004598 ORTHO05D005550 2.6e-09 67.8 57 52.6
SHI47796 Sapria himalayana HOM05D004598 ORTHO05D005550 7.5e-09 66.2 53 60.4
SHI41529 Sapria himalayana HOM05D004598 ORTHO05D005550 5.4e-07 60.1 62 48.4


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