Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.G03411 Eucalyptus grandis HOM05D007302 ORTHO05D009191 9.8e-81 303.5 166 100.0
QL04p001433 Quercus lobata HOM05D007302 ORTHO05D009191 1.2e-46 190.3 117 83.8
MD07G1001600 Malus domestica HOM05D007302 ORTHO05D009191 4.6e-46 188.3 124 78.2
Prupe.2G003100 Prunus persica HOM05D007302 ORTHO05D009191 7.8e-46 187.6 118 81.4
RcHm_v2.0_Chr1g0313291 Rosa chinensis HOM05D007302 ORTHO05D009191 1.3e-45 186.8 121 81.0
CANSAT11G0176 Cannabis sativa HOM05D007302 ORTHO05D009191 3.9e-45 185.3 120 80.8
FAN03G0504 Fragaria x ananassa HOM05D007302 ORTHO05D009191 5.1e-45 184.9 118 80.5
Ciclev10033063m.g Citrus clementina HOM05D007302 ORTHO05D009191 8.7e-45 184.1 123 77.2
Manes.10G151800 Manihot esculenta HOM05D007302 ORTHO05D009191 3.3e-44 182.2 121 77.7
Thhalv10001676m.g Eutrema salsugineum HOM05D007302 ORTHO05D009191 1.3e-43 180.3 124 75.8
THA.LOC104817151 Tarenaya hassleriana HOM05D007302 ORTHO05D009191 2.1e-43 179.5 121 78.5
FvH4_7g00100 Fragaria vesca HOM05D007302 ORTHO05D009191 3.6e-43 178.7 107 86.9
Thecc.01G416400 Theobroma cacao HOM05D007302 ORTHO05D009191 3.6e-43 178.7 113 83.2
AT2G44360 Arabidopsis thaliana HOM05D007302 ORTHO05D009191 4.8e-43 178.3 119 78.2
TWI09G1618 Tripterygium wilfordii HOM05D007302 ORTHO05D009191 6.2e-43 177.9 113 80.5
Cfa010688 Carpinus fangiana HOM05D007302 ORTHO05D009191 1.4e-42 176.8 117 77.8
CsaV3_7G031460 Cucumis sativus L. HOM05D007302 ORTHO05D009191 1.4e-42 176.8 120 77.5
QL04p001298 Quercus lobata HOM05D007302 ORTHO05D009191 1.4e-42 176.8 141 69.5
Sp4g26420 Schrenkiella parvula HOM05D007302 ORTHO05D009191 1.4e-42 176.8 119 77.3
Cpa.g.sc189.6 Carica papaya HOM05D007302 ORTHO05D009191 1.8e-42 176.4 121 74.4
Potri.001G230100 Populus trichocarpa HOM05D007302 ORTHO05D009191 2.4e-42 176.0 116 79.3
vmacro13612 Vaccinium macrocarpon HOM05D007302 ORTHO05D009191 2.4e-42 176.0 126 73.8
Lj3g0023486 Lotus japonicus HOM05D007302 ORTHO05D009191 4.0e-42 175.3 117 76.1
Lj6g0025867 Lotus japonicus HOM05D007302 ORTHO05D009191 4.0e-42 175.3 117 76.1
Aa31LG1G25940 Aethionema arabicum HOM05D007302 ORTHO05D009191 5.3e-42 174.9 118 78.0
Carub.0004s2694 Capsella rubella HOM05D007302 ORTHO05D009191 5.3e-42 174.9 119 76.5
Glyma.15G268700 Glycine max HOM05D007302 ORTHO05D009191 5.3e-42 174.9 117 75.2
Sed0011752 Sechium edule HOM05D007302 ORTHO05D009191 6.9e-42 174.5 120 75.0
arahy.Tifrunner.gnm1.ann1.5U19IL Arachis hypogaea HOM05D007302 ORTHO05D009191 9.0e-42 174.1 118 75.4
arahy.Tifrunner.gnm1.ann1.Z7X15P Arachis hypogaea HOM05D007302 ORTHO05D009191 9.0e-42 174.1 118 75.4
Haze_03286 Corylus avellana HOM05D007302 ORTHO05D009191 9.0e-42 174.1 116 77.6
Ca_02882_v3 Cicer arietinum L. HOM05D007302 ORTHO05D009191 1.2e-41 173.7 121 73.6
Gohir.D08G037201 Gossypium hirsutum HOM05D007302 ORTHO05D009191 2.0e-41 172.9 113 80.5
Gorai.004G035200 Gossypium raimondii HOM05D007302 ORTHO05D009191 2.0e-41 172.9 113 80.5
Phvul.005G041100 Phaseolus vulgaris HOM05D007302 ORTHO05D009191 2.0e-41 172.9 118 73.7
DCAR_015712 Daucus carota HOM05D007302 ORTHO05D009191 2.6e-41 172.6 108 83.3
Nn2g15684 Nelumbo nucifera HOM05D007302 ORTHO05D009191 2.6e-41 172.6 124 74.2
Duzib268G0295 Durio zibethinus HOM05D007302 ORTHO05D009191 3.4e-41 172.2 119 77.3
Medtr2g061420 Medicago truncatula HOM05D007302 ORTHO05D009191 3.4e-41 172.2 118 75.4
AL4G43340 Arabidopsis lyrata HOM05D007302 ORTHO05D009191 4.5e-41 171.8 119 75.6
VMungo1080G0568 Vigna mungo HOM05D007302 ORTHO05D009191 5.8e-41 171.4 121 71.1
CARHR139520 Cardamine hirsuta HOM05D007302 ORTHO05D009191 7.6e-41 171.0 119 74.8
TPR.G16161 Trifolium pratense HOM05D007302 ORTHO05D009191 9.9e-41 170.6 118 74.6
TAR369G0332 Trochodendron aralioides HOM05D007302 ORTHO05D009191 9.9e-41 170.6 112 79.5
TAR369G0850 Trochodendron aralioides HOM05D007302 ORTHO05D009191 9.9e-41 170.6 140 66.4
Gohir.A08G026680 Gossypium hirsutum HOM05D007302 ORTHO05D009191 1.3e-40 170.2 113 79.6
Lalb_Chr25g0283591 Lupinus albus HOM05D007302 ORTHO05D009191 1.3e-40 170.2 126 69.8
Actinidia05847 Actinidia chinensis HOM05D007302 ORTHO05D009191 2.9e-40 169.1 116 77.6
GSVIVG01001360001 Vitis vinifera HOM05D007302 ORTHO05D009191 2.9e-40 169.1 113 77.9
Actinidia31711 Actinidia chinensis HOM05D007302 ORTHO05D009191 3.8e-40 168.7 113 78.8
ClCG09G003750 Citrullus lanatus HOM05D007302 ORTHO05D009191 4.9e-40 168.3 126 73.0
MBI08_g23101_MAGBIO Magnolia biondii HOM05D007302 ORTHO05D009191 4.9e-40 168.3 110 79.1
A04p33280 Brassica napus HOM05D007302 ORTHO05D009191 6.4e-40 167.9 112 77.7
BraA04t18789Z Brassica rapa HOM05D007302 ORTHO05D009191 6.4e-40 167.9 112 77.7
BcaB06g29370 Brassica carinata HOM05D007302 ORTHO05D009191 8.4e-40 167.5 112 77.7
C04p70980 Brassica napus HOM05D007302 ORTHO05D009191 8.4e-40 167.5 112 77.7
BolC4t28601H Brassica oleracea HOM05D007302 ORTHO05D009191 8.4e-40 167.5 112 77.7
Psat1g127480 Pisum sativum HOM05D007302 ORTHO05D009191 1.1e-39 167.2 118 72.9
Rhsim07G0050000 Rhododendron simsii HOM05D007302 ORTHO05D009191 3.2e-39 165.6 113 76.1
Sopen10g014540 Solanum pennellii HOM05D007302 ORTHO05D009191 3.2e-39 165.6 124 68.5
Atru.chr11.2701 Acer truncatum HOM05D007302 ORTHO05D009191 4.2e-39 165.2 119 74.8
MELO3C023508.2 Cucumis melo HOM05D007302 ORTHO05D009191 7.1e-39 164.5 140 67.1
FAN06G3306 Fragaria x ananassa HOM05D007302 ORTHO05D009191 1.6e-38 163.3 107 79.4
Lsat_1_v5_gn_1_87261 Lactuca sativa HOM05D007302 ORTHO05D009191 1.6e-38 163.3 123 71.5
Migut.O00474 Erythranthe guttata HOM05D007302 ORTHO05D009191 2.1e-38 162.9 121 66.1
Migut.N01659 Erythranthe guttata HOM05D007302 ORTHO05D009191 2.7e-38 162.5 121 66.1
MSTRG.28098 Avicennia marina HOM05D007302 ORTHO05D009191 4.6e-38 161.8 123 67.5
FAN10G3108 Fragaria x ananassa HOM05D007302 ORTHO05D009191 7.9e-38 161.0 107 78.5
SalBow4G1665 Salvia bowleyana HOM05D007302 ORTHO05D009191 1.8e-37 159.8 123 68.3
SalBow4G2255 Salvia bowleyana HOM05D007302 ORTHO05D009191 1.8e-37 159.8 123 68.3
PGSC0003DMG400028766 Solanum tuberosum HOM05D007302 ORTHO05D009191 3.0e-37 159.1 124 66.9
Solyc10g045350.2 Solanum lycopersicum HOM05D007302 ORTHO05D009191 5.1e-37 158.3 121 68.6
Aqoxy1G00038 Aquilegia oxysepala HOM05D003342 ORTHO05D003861 8.7e-37 157.5 121 66.9
PSO384G4593 Papaver somniferum HOM05D007302 ORTHO05D009191 8.7e-37 157.5 116 72.4
ECA248G3756 Erigeron canadensis HOM05D007302 ORTHO05D009191 1.1e-36 157.1 123 68.3
Peaxi162Scf00245g01315 Petunia axillaris HOM05D007302 ORTHO05D009191 1.1e-36 157.1 121 67.8
PSO339G0269 Papaver somniferum HOM05D007302 ORTHO05D009191 1.5e-36 156.8 116 71.6
Sabra16G0137900 Salix brachista HOM05D007302 ORTHO05D009191 3.3e-36 155.6 117 73.5
CiPaw.16G067000 Carya illinoinensis HOM05D007302 ORTHO05D009191 9.6e-36 154.1 104 76.9
Cc02_g26960 Coffea canephora HOM05D007302 ORTHO05D009191 1.6e-35 153.3 117 70.9
HanXRQChr15g0480631 Helianthus annuus HOM05D007302 ORTHO05D009191 3.7e-35 152.1 119 68.9
Actinidia25680 Actinidia chinensis HOM05D007302 ORTHO05D009191 4.8e-35 151.8 100 79.0
CSS0001542 Camellia sinensis var. sinensis HOM05D007302 ORTHO05D009191 8.1e-35 151.0 103 76.7
CSS0004707 Camellia sinensis var. sinensis HOM05D007302 ORTHO05D009191 1.1e-34 150.6 94 81.9
unitig_736.g22290 Utricularia gibba HOM05D007302 ORTHO05D009191 1.4e-34 150.2 116 68.1
Nn7g36009 Nelumbo nucifera HOM05D007302 ORTHO05D009191 1.8e-34 149.8 106 73.6
Sc11g0006270 Simmondsia chinensis HOM05D007302 ORTHO05D009191 4.0e-34 148.7 107 71.0
CDE07G1496 Ceratophyllum demersum HOM05D007302 ORTHO05D009191 2.9e-32 142.5 122 58.2
SGA_v2.0_scaffold95G28773 Striga asiatica HOM05D007302 ORTHO05D009191 7.1e-31 137.9 121 62.0
EL10Ac9g21938 Beta vulgaris HOM05D007302 ORTHO05D009191 1.0e-29 134.0 121 62.8
ATR0807G228 Amborella trichopoda HOM05D007302 ORTHO05D009191 2.3e-29 132.9 102 66.7
COL.COLO4_25061 Corchorus olitorius HOM05D007302 ORTHO05D009191 2.3e-29 132.9 113 68.1
Hund06578 Selenicereus undatus HOM05D007302 ORTHO05D009191 3.9e-29 132.1 103 68.0
Dinv43937 Davidia involucrata HOM05D007302 ORTHO05D009191 8.7e-29 131.0 118 62.7
SEGI_27997 Sequoiadendron giganteum HOM05D007302 ORTHO05D009191 8.7e-29 131.0 119 58.8
CSS0017005 Camellia sinensis var. sinensis HOM05D007302 ORTHO05D009191 2.0e-25 119.8 103 62.1
AUR62011558 Chenopodium quinoa HOM05D007302 ORTHO05D009191 5.0e-24 115.2 98 62.2
AUR62016377 Chenopodium quinoa HOM05D007302 ORTHO05D009191 6.5e-24 114.8 104 59.6
HPP92_022445 Vanilla planifolia HOM05D007302 ORTHO05D009191 2.5e-23 112.8 86 70.9
CSS0014571 Camellia sinensis var. sinensis HOM05D007302 ORTHO05D009191 5.1e-21 105.1 100 58.0
DCAR_024994 Daucus carota HOM05D007302 ORTHO05D009191 8.2e-19 97.8 95 60.0
Os09g0553800 Oryza sativa ssp. japonica HOM05D007302 ORTHO05D009191 8.2e-19 97.8 62 80.6
Pp3c17_19080 Physcomitrium patens HOM05D007302 ORTHO05D009191 1.4e-18 97.1 103 49.5
Oeu003126.2 Olea europaea HOM05D007302 ORTHO05D009191 3.1e-18 95.9 63 73.0
CBR_g22319 Chara braunii HOM05D000019 ORTHO05D000048 2.9e-16 89.4 116 42.2
Mapoly0007s0266 Marchantia polymorpha HOM05D007302 ORTHO05D009191 5.0e-16 88.6 103 47.6
MD05G1005700 Malus domestica HOM05D007302 ORTHO05D009191 3.6e-14 82.4 52 82.7
BcaB01g03316 Brassica carinata HOM05D007302 ORTHO05D009191 3.8e-08 62.4 49 67.3
MD15G1336100 Malus domestica HOM05D007302 ORTHO05D009191 1.1e-07 60.8 44 63.6
SMO290G0010 Selaginella moellendorffii HOM05D009355 ORTHO05D011581 7.2e-07 58.2 123 32.5


User provided reference genes

Program Settings