Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.G03390 Eucalyptus grandis HOM05D006848 ORTHO05D008445 5.7e-133 477.6 247 100.0
Eucgr.H02489 Eucalyptus grandis HOM05D006848 ORTHO05D008445 1.5e-109 399.8 245 86.9
Ciclev10032624m.g Citrus clementina HOM05D006848 ORTHO05D008445 2.9e-89 332.4 246 71.5
ClCG09G004240 Citrullus lanatus HOM05D006848 ORTHO05D008445 3.8e-89 332.0 253 70.0
CsaV3_7G031150 Cucumis sativus L. HOM05D006848 ORTHO05D008445 2.5e-88 329.3 248 69.8
Glyma.15G273300 Glycine max HOM05D006848 ORTHO05D008445 3.2e-88 328.9 244 73.0
Sed0006624 Sechium edule HOM05D006848 ORTHO05D008445 5.5e-88 328.2 249 69.1
Aqoxy3G03705 Aquilegia oxysepala HOM05D006848 ORTHO05D008445 9.4e-88 327.4 198 81.3
VMungo1080G1360 Vigna mungo HOM05D006848 ORTHO05D008445 9.4e-88 327.4 209 79.9
COL.COLO4_23924 Corchorus olitorius HOM05D006848 ORTHO05D008445 4.7e-87 325.1 250 70.8
CANSAT80G2127 Cannabis sativa HOM05D006848 ORTHO05D008445 6.1e-87 324.7 249 69.5
Thecc.01G412000 Theobroma cacao HOM05D006848 ORTHO05D008445 1.0e-86 323.9 247 70.0
Migut.B01319 Erythranthe guttata HOM05D006848 ORTHO05D008445 1.8e-86 323.2 246 68.3
MBI01_g27616_MAGBIO Magnolia biondii HOM05D006848 ORTHO05D008445 2.3e-86 322.8 184 84.8
CiPaw.13G004400 Carya illinoinensis HOM05D006848 ORTHO05D008445 4.0e-86 322.0 188 81.9
Potri.009G062500 Populus trichocarpa HOM05D006848 ORTHO05D008445 4.0e-86 322.0 244 72.1
Sabra09G0046200 Salix brachista HOM05D006848 ORTHO05D008445 5.2e-86 321.6 244 71.7
QL04p007215 Quercus lobata HOM05D006848 ORTHO05D008445 8.8e-86 320.9 248 66.5
FvH4_7g00900 Fragaria vesca HOM05D006848 ORTHO05D008445 1.5e-85 320.1 249 67.1
TWI53G1868 Tripterygium wilfordii HOM05D006848 ORTHO05D008445 9.8e-85 317.4 254 67.3
Atru.chr11.2648 Acer truncatum HOM05D006848 ORTHO05D008445 1.3e-84 317.0 247 69.2
Glyma.08G154300 Glycine max HOM05D006848 ORTHO05D008445 1.3e-84 317.0 243 70.4
Gorai.004G065300 Gossypium raimondii HOM05D006848 ORTHO05D008445 1.3e-84 317.0 247 69.6
Hma1.2p1_0312F.1_g121500 Hydrangea macrophylla HOM05D006848 ORTHO05D008445 1.3e-84 317.0 248 66.1
PGR031G3843 Punica granatum HOM05D006848 ORTHO05D008445 1.3e-84 317.0 254 67.7
Gohir.A08G053600 Gossypium hirsutum HOM05D006848 ORTHO05D008445 1.7e-84 316.6 183 84.2
Gohir.D08G063100 Gossypium hirsutum HOM05D006848 ORTHO05D008445 1.7e-84 316.6 247 69.6
Haze_03213 Corylus avellana HOM05D006848 ORTHO05D008445 2.2e-84 316.2 251 66.9
Duzib138G1675 Durio zibethinus HOM05D006848 ORTHO05D008445 2.8e-84 315.8 247 68.4
SalBow5G3403 Salvia bowleyana HOM05D006848 ORTHO05D008445 6.3e-84 314.7 243 68.3
Lalb_Chr01g0015361 Lupinus albus HOM05D006848 ORTHO05D008445 8.3e-84 314.3 248 68.5
Oeu036185.1 Olea europaea HOM05D006848 ORTHO05D008445 8.3e-84 314.3 247 67.6
PSO384G0049 Papaver somniferum HOM05D006848 ORTHO05D008445 1.4e-83 313.5 200 77.5
Nitab4.5_0002477g0050 Nicotiana tabacum HOM05D006848 ORTHO05D008445 1.8e-83 313.2 245 66.9
Peaxi162Scf00428g00063 Petunia axillaris HOM05D006848 ORTHO05D008445 2.4e-83 312.8 196 77.6
EL10Ac2g03652 Beta vulgaris HOM05D006848 ORTHO05D008445 3.1e-83 312.4 249 67.1
Phvul.005G020200 Phaseolus vulgaris HOM05D006848 ORTHO05D008445 3.1e-83 312.4 243 70.4
THA.LOC104819691 Tarenaya hassleriana HOM05D006848 ORTHO05D008445 3.1e-83 312.4 195 77.9
TAR623G0130 Trochodendron aralioides HOM05D006848 ORTHO05D008445 3.1e-83 312.4 169 85.2
Nitab4.5_0000634g0080 Nicotiana tabacum HOM05D006848 ORTHO05D008445 4.1e-83 312.0 183 82.0
MD07G1008600 Malus domestica HOM05D006848 ORTHO05D008445 7.0e-83 311.2 253 65.6
TWI09G1547 Tripterygium wilfordii HOM05D006848 ORTHO05D008445 7.0e-83 311.2 249 68.3
CAN.G170.111 Capsicum annuum HOM05D006848 ORTHO05D008445 9.1e-83 310.8 209 73.7
Sc10g0000020 Simmondsia chinensis HOM05D006848 ORTHO05D008445 9.1e-83 310.8 185 80.0
PGSC0003DMG400006872 Solanum tuberosum HOM05D006848 ORTHO05D008445 9.1e-83 310.8 244 67.6
MELO3C023542.2 Cucumis melo HOM05D006848 ORTHO05D008445 1.2e-82 310.5 253 66.0
PSO135G0340 Papaver somniferum HOM05D006848 ORTHO05D008445 1.2e-82 310.5 200 77.0
TAR623G0094 Trochodendron aralioides HOM05D006848 ORTHO05D008445 1.2e-82 310.5 243 67.1
Ca_14368_v3 Cicer arietinum L. HOM05D006848 ORTHO05D008445 1.6e-82 310.1 184 80.4
vmacro13656 Vaccinium macrocarpon HOM05D006848 ORTHO05D008445 1.6e-82 310.1 241 68.5
TPR.G12217 Trifolium pratense HOM05D006848 ORTHO05D008445 2.0e-82 309.7 186 77.4
Sopen01g034120 Solanum pennellii HOM05D006848 ORTHO05D008445 3.5e-82 308.9 181 81.2
DCAR_029663 Daucus carota HOM05D006848 ORTHO05D008445 5.9e-82 308.1 187 77.0
Rhsim07G0054800 Rhododendron simsii HOM05D006848 ORTHO05D008445 5.9e-82 308.1 251 64.1
FAN10G1997 Fragaria x ananassa HOM05D006848 ORTHO05D008445 7.7e-82 307.8 255 65.9
Solyc01g087040.2 Solanum lycopersicum HOM05D006848 ORTHO05D008445 7.7e-82 307.8 181 80.7
Psat5g204320 Pisum sativum HOM05D006848 ORTHO05D008445 1.0e-81 307.4 170 82.4
Cpa.g.sc386.5 Carica papaya HOM05D006848 ORTHO05D008445 1.7e-81 306.6 240 69.2
Cc02_g27800 Coffea canephora HOM05D006848 ORTHO05D008445 2.3e-81 306.2 173 82.1
MD02G1313800 Malus domestica HOM05D006848 ORTHO05D008445 2.3e-81 306.2 251 65.3
Lj7A569T67 Lonicera japonica HOM05D006848 ORTHO05D008445 2.9e-81 305.8 170 83.5
AL5G46400 Arabidopsis lyrata HOM05D006848 ORTHO05D008445 5.0e-81 305.1 198 76.8
Medtr3g028150 Medicago truncatula HOM05D006848 ORTHO05D008445 5.0e-81 305.1 177 80.8
unitig_750.g28451 Utricularia gibba HOM05D006848 ORTHO05D008445 5.0e-81 305.1 190 78.9
Peaxi162Scf00347g00071 Petunia axillaris HOM05D006848 ORTHO05D008445 1.1e-80 303.9 244 66.8
CARHR291430 Cardamine hirsuta HOM05D006848 ORTHO05D008445 2.1e-79 299.7 243 65.8
Carub.0005s3015 Capsella rubella HOM05D006848 ORTHO05D008445 3.6e-79 298.9 245 63.7
A03p27190 Brassica napus HOM05D006848 ORTHO05D008445 1.0e-78 297.4 250 64.4
BraA03t11932Z Brassica rapa HOM05D006848 ORTHO05D008445 1.0e-78 297.4 250 64.4
HanXRQChr01g0016151 Helianthus annuus HOM05D006848 ORTHO05D008445 1.0e-78 297.4 248 64.5
BcaC01g04883 Brassica carinata HOM05D006848 ORTHO05D008445 3.0e-78 295.8 249 63.9
BolC3t15604H Brassica oleracea HOM05D006848 ORTHO05D008445 4.0e-78 295.4 249 63.9
Nn113s43373 Nelumbo nucifera HOM05D006848 ORTHO05D008445 4.0e-78 295.4 174 80.5
Nn2g15435 Nelumbo nucifera HOM05D006848 ORTHO05D008445 4.0e-78 295.4 174 80.5
arahy.Tifrunner.gnm1.ann1.9ZN1DC Arachis hypogaea HOM05D006848 ORTHO05D008445 6.8e-78 294.7 184 77.7
BcaB01g02988 Brassica carinata HOM05D006848 ORTHO05D008445 8.9e-78 294.3 247 64.4
CDE05G1882 Ceratophyllum demersum HOM05D006848 ORTHO05D008445 1.2e-77 293.9 245 64.5
arahy.Tifrunner.gnm1.ann1.27LE56 Arachis hypogaea HOM05D006848 ORTHO05D008445 7.5e-77 291.2 249 64.3
FAN01G1688 Fragaria x ananassa HOM05D006848 ORTHO05D008445 2.2e-76 289.7 242 64.0
Prupe.2G012000 Prunus persica HOM05D006848 ORTHO05D008445 1.1e-75 287.3 254 61.4
RcHm_v2.0_Chr3g0473601 Rosa chinensis HOM05D006848 ORTHO05D008445 1.8e-75 286.6 226 70.4
Lsat_1_v5_gn_1_107841 Lactuca sativa HOM05D006848 ORTHO05D008445 2.4e-75 286.2 247 62.8
ATR0605G006 Amborella trichopoda HOM05D006848 ORTHO05D008445 5.4e-75 285.0 202 72.8
AUR62009377 Chenopodium quinoa HOM05D006848 ORTHO05D008445 7.0e-75 284.6 173 77.5
ECA248G3622 Erigeron canadensis HOM05D006848 ORTHO05D008445 6.1e-71 271.6 250 61.2
SGA_v2.0_scaffold167G38443 Striga asiatica HOM05D006848 ORTHO05D008445 1.0e-70 270.8 247 60.7
FAN06G1876 Fragaria x ananassa HOM05D006848 ORTHO05D008445 1.4e-70 270.4 240 61.2
SEGI_25651 Sequoiadendron giganteum HOM05D006848 ORTHO05D008445 1.2e-69 267.3 196 68.9
Zm00001eb034740 Zea mays HOM05D006848 ORTHO05D008445 5.8e-69 265.0 180 72.2
Sp1g00010 Schrenkiella parvula HOM05D006848 ORTHO05D008445 9.8e-69 264.2 247 58.7
Sp5g00040 Schrenkiella parvula HOM05D006848 ORTHO05D008445 9.8e-69 264.2 247 58.7
HPP92_007477 Vanilla planifolia HOM05D006848 ORTHO05D008445 1.7e-68 263.5 241 58.5
Aa31LG10G17430 Aethionema arabicum HOM05D006848 ORTHO05D008445 2.2e-68 263.1 152 79.6
Thhalv10006361m.g Eutrema salsugineum HOM05D006848 ORTHO05D008445 3.7e-68 262.3 244 60.2
C03p32680 Brassica napus HOM05D006848 ORTHO05D008445 4.9e-68 261.9 228 63.6
Manes.10G144600 Manihot esculenta HOM05D006848 ORTHO05D008445 1.1e-67 260.8 207 71.0
AagrBONN_evm.TU.Sc2ySwM_228.3199 Anthoceros agrestis HOM05D006848 ORTHO05D008445 7.0e-67 258.1 199 62.8
AUR62023058 Chenopodium quinoa HOM05D006848 ORTHO05D008445 9.2e-67 257.7 245 58.4
Lj1g0010524 Lotus japonicus HOM05D006848 ORTHO05D008445 2.7e-66 256.1 170 73.5
SMO217G0004 Selaginella moellendorffii HOM05D006848 ORTHO05D008445 3.9e-65 252.3 183 65.0
SMO356G0122 Selaginella moellendorffii HOM05D006848 ORTHO05D008445 3.9e-65 252.3 183 65.0
AT3G63540 Arabidopsis thaliana HOM05D006848 ORTHO05D008445 4.7e-63 245.4 140 81.4
Os08g0504500 Oryza sativa ssp. japonica HOM05D006848 ORTHO05D008445 1.1e-62 244.2 169 71.0
Mapoly0075s0034 Marchantia polymorpha HOM05D006848 ORTHO05D008445 7.5e-61 238.0 200 60.5
Pp3c4_11800 Physcomitrium patens HOM05D006848 ORTHO05D008445 1.1e-59 234.2 233 53.6
Actinidia36713 Actinidia chinensis HOM05D006848 ORTHO05D008445 1.4e-59 233.8 130 86.9
Dinv43453 Davidia involucrata HOM05D006848 ORTHO05D008445 1.9e-59 233.4 136 83.8
CBR_g23941 Chara braunii HOM05D006848 ORTHO05D008445 4.3e-56 222.2 204 55.9
CDE05G3657 Ceratophyllum demersum HOM05D000031 ORTHO05D008445 5.1e-49 198.7 126 76.2
RcHm_v2.0_Chr1g0315791 Rosa chinensis HOM05D006848 ORTHO05D008445 3.6e-47 192.6 120 75.0
Hma1.2p1_0137F.1_g062450 Hydrangea macrophylla HOM05D006848 ORTHO05D008445 2.4e-46 189.9 124 75.8
Actinidia24670 Actinidia chinensis HOM05D006848 ORTHO05D008445 1.5e-40 170.6 105 81.9
MCO14G442 Micromonas commoda HOM05D006848 ORTHO05D008445 3.9e-25 119.4 214 36.4
SEGI_20764 Sequoiadendron giganteum HOM05D006848 ORTHO05D008445 7.4e-24 115.2 88 69.3
Cre03.g198850 Chlamydomonas reinhardtii HOM05D006848 ORTHO05D008445 3.8e-20 102.8 250 30.8
PRCOL_00004469 Prasinoderma coloniale HOM05D006848 ORTHO05D008445 4.6e-18 95.9 186 36.6
A04p00030 Brassica napus HOM05D006848 ORTHO05D008445 4.6e-10 69.3 50 62.0
MCO12G188 Micromonas commoda HOM05D006848 ORTHO05D008445 1.6e-07 60.8 240 30.0
Hund17393 Selenicereus undatus HOM05D006773 ORTHO05D008775 6.3e-07 58.9 163 27.6


User provided reference genes

Program Settings