Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.G03381 Eucalyptus grandis HOM05D007629 ORTHO05D009511 3.1e-70 268.5 147 100.0
CANSAT80G2723 Cannabis sativa HOM05D007629 ORTHO05D009511 5.7e-32 141.4 145 58.6
Dinv43443 Davidia involucrata HOM05D007629 ORTHO05D009511 9.7e-32 140.6 140 59.3
Haze_03204 Corylus avellana HOM05D007629 ORTHO05D009511 1.3e-31 140.2 146 58.9
Atru.chr11.2627 Acer truncatum HOM05D007629 ORTHO05D009511 2.2e-31 139.4 111 68.5
arahy.Tifrunner.gnm1.ann1.CVX1Z9 Arachis hypogaea HOM05D007629 ORTHO05D009511 3.7e-31 138.7 142 58.5
arahy.Tifrunner.gnm1.ann1.4N8Z75 Arachis hypogaea HOM05D007629 ORTHO05D009511 8.2e-31 137.5 142 57.7
ECA234G2567 Erigeron canadensis HOM05D007629 ORTHO05D009511 8.2e-31 137.5 143 55.2
ClCG10G012340 Citrullus lanatus HOM05D007629 ORTHO05D009511 1.8e-30 136.3 138 57.2
Manes.07G006300 Manihot esculenta HOM05D007629 ORTHO05D009511 2.4e-30 136.0 149 57.7
MELO3C023979.2 Cucumis melo HOM05D007629 ORTHO05D009511 9.1e-30 134.0 145 54.5
Lsat_1_v5_gn_4_31601 Lactuca sativa HOM05D007629 ORTHO05D009511 9.1e-30 134.0 146 53.4
Glyma.13G202600 Glycine max HOM05D007629 ORTHO05D009511 2.7e-29 132.5 143 58.0
CsaV3_3G032130 Cucumis sativus L. HOM05D007629 ORTHO05D009511 7.7e-29 131.0 145 53.8
Atru.chr11.2625 Acer truncatum HOM05D007629 ORTHO05D009511 1.0e-28 130.6 116 63.8
Potri.001G266500 Populus trichocarpa HOM05D007629 ORTHO05D009511 1.3e-28 130.2 140 54.3
TAR369G1117 Trochodendron aralioides HOM05D007629 ORTHO05D009511 1.7e-28 129.8 139 58.3
Nn7g36205 Nelumbo nucifera HOM05D007629 ORTHO05D009511 3.8e-28 128.6 102 68.6
Sed0004901 Sechium edule HOM05D007629 ORTHO05D009511 5.0e-28 128.3 139 53.2
Lj3g0012705 Lotus japonicus HOM05D007629 ORTHO05D009511 6.5e-28 127.9 138 59.4
EL10Ac2g04331 Beta vulgaris HOM05D007629 ORTHO05D009511 1.1e-27 127.1 138 55.8
Nitab4.5_0001186g0030 Nicotiana tabacum HOM05D007629 ORTHO05D009511 1.5e-27 126.7 160 49.4
HanXRQChr17g0562961 Helianthus annuus HOM05D007629 ORTHO05D009511 7.2e-27 124.4 142 54.9
Ciclev10033658m.g Citrus clementina HOM05D007629 ORTHO05D009511 2.1e-26 122.9 104 64.4
QL04p006494 Quercus lobata HOM05D007629 ORTHO05D009511 6.1e-26 121.3 136 55.1
RcHm_v2.0_Chr1g0316061 Rosa chinensis HOM05D007629 ORTHO05D009511 6.1e-26 121.3 154 51.3
CiPaw.13G005200 Carya illinoinensis HOM05D007629 ORTHO05D009511 1.0e-25 120.6 141 56.0
DCAR_029669 Daucus carota HOM05D007629 ORTHO05D009511 1.0e-25 120.6 149 53.7
Glyma.12G237100 Glycine max HOM05D007629 ORTHO05D009511 1.0e-25 120.6 141 55.3
SGA_v2.0_scaffold24G10674 Striga asiatica HOM05D007629 ORTHO05D009511 1.0e-25 120.6 133 56.4
Cc02_g27970 Coffea canephora HOM05D007629 ORTHO05D009511 1.4e-25 120.2 145 53.8
Cfa010767 Carpinus fangiana HOM05D007629 ORTHO05D009511 1.8e-25 119.8 121 57.9
Duzib138G1419 Durio zibethinus HOM05D007629 ORTHO05D009511 2.3e-25 119.4 144 50.7
Gohir.D08G063600 Gossypium hirsutum HOM05D007629 ORTHO05D009511 2.3e-25 119.4 109 62.4
Gorai.004G065600 Gossypium raimondii HOM05D007629 ORTHO05D009511 2.3e-25 119.4 109 62.4
PGSC0003DMG400006802 Solanum tuberosum HOM05D007629 ORTHO05D009511 2.3e-25 119.4 145 49.7
FAN06G2853 Fragaria x ananassa HOM05D007629 ORTHO05D009511 3.0e-25 119.0 125 57.6
Gohir.A08G053900 Gossypium hirsutum HOM05D007629 ORTHO05D009511 3.0e-25 119.0 111 61.3
Thecc.01G410700 Theobroma cacao HOM05D007629 ORTHO05D009511 3.0e-25 119.0 99 64.6
TWI53G0918 Tripterygium wilfordii HOM05D007629 ORTHO05D009511 3.0e-25 119.0 97 68.0
FvH4_7g01080 Fragaria vesca HOM05D007629 ORTHO05D009511 4.0e-25 118.6 160 48.8
FAN03G3264 Fragaria x ananassa HOM05D007629 ORTHO05D009511 4.0e-25 118.6 124 58.9
Migut.N01599 Erythranthe guttata HOM05D007629 ORTHO05D009511 5.2e-25 118.2 141 50.4
Lalb_Chr01g0008051 Lupinus albus HOM05D007629 ORTHO05D009511 5.2e-25 118.2 143 53.8
Phvul.011G211600 Phaseolus vulgaris HOM05D007629 ORTHO05D009511 5.2e-25 118.2 131 55.0
Psat4g149000 Pisum sativum HOM05D007629 ORTHO05D009511 8.8e-25 117.5 132 57.6
COL.COLO4_04855 Corchorus olitorius HOM05D000074 ORTHO05D000220 1.5e-24 116.7 154 48.7
Oeu010795.1 Olea europaea HOM05D007629 ORTHO05D009511 1.5e-24 116.7 124 56.5
FAN01G0239 Fragaria x ananassa HOM05D007629 ORTHO05D009511 2.0e-24 116.3 119 59.7
Medtr8g037205 Medicago truncatula HOM05D007629 ORTHO05D009511 2.0e-24 116.3 131 55.7
Solyc01g087180.4 Solanum lycopersicum HOM05D007629 ORTHO05D009511 2.0e-24 116.3 110 59.1
Ca_23857_v3 Cicer arietinum L. HOM05D007629 ORTHO05D009511 2.6e-24 115.9 142 52.8
CAN.G1560.3 Capsicum annuum HOM05D007629 ORTHO05D009511 5.7e-24 114.8 164 45.1
Sc11g0009160 Simmondsia chinensis HOM05D007629 ORTHO05D009511 5.7e-24 114.8 105 61.0
TPR.G1849 Trifolium pratense HOM05D007629 ORTHO05D009511 5.7e-24 114.8 135 56.3
GSVIVG01032094001 Vitis vinifera HOM05D007629 ORTHO05D009511 7.5e-24 114.4 106 64.2
Actinidia21549 Actinidia chinensis HOM05D007629 ORTHO05D009511 1.7e-23 113.2 142 50.0
Cpa.g.c29394.2 Carica papaya HOM05D007629 ORTHO05D009511 2.8e-23 112.5 97 62.9
TWI53G0001 Tripterygium wilfordii HOM05D007629 ORTHO05D009511 3.7e-23 112.1 137 52.6
Aqoxy2G00135 Aquilegia oxysepala HOM05D007629 ORTHO05D009511 6.3e-23 111.3 119 58.0
MD07G1011000 Malus domestica HOM05D007629 ORTHO05D009511 6.3e-23 111.3 189 46.6
VMungo1127G0677 Vigna mungo HOM05D007629 ORTHO05D009511 1.4e-22 110.2 138 52.9
PGR031G1171 Punica granatum HOM05D007629 ORTHO05D009511 1.8e-22 109.8 131 54.2
Sabra16G0163500 Salix brachista HOM05D007629 ORTHO05D009511 3.1e-22 109.0 128 51.6
Actinidia20665 Actinidia chinensis HOM05D007629 ORTHO05D009511 2.3e-20 102.8 113 54.0
Aa31sc522G10 Aethionema arabicum HOM05D007629 ORTHO05D009511 7.2e-19 97.8 136 48.5
CSS0036847 Camellia sinensis var. sinensis HOM05D007629 ORTHO05D009511 7.2e-19 97.8 102 55.9
MBI01_g26744_MAGBIO Magnolia biondii HOM05D007629 ORTHO05D009511 1.2e-18 97.1 107 55.1
Sed0017474 Sechium edule HOM05D007629 ORTHO05D009511 3.6e-18 95.5 91 59.3
Nitab4.5_0026617g0010 Nicotiana tabacum HOM05D007629 ORTHO05D009511 4.7e-18 95.1 135 45.9
Prupe.2G013500 Prunus persica HOM05D007629 ORTHO05D009511 8.0e-18 94.4 120 52.5
AL1G18320 Arabidopsis lyrata HOM05D007629 ORTHO05D009511 6.8e-17 91.3 111 51.4
PSO764G0291 Papaver somniferum HOM05D007629 ORTHO05D009511 1.2e-16 90.5 193 38.9
PSO832G4302 Papaver somniferum HOM05D007629 ORTHO05D009511 1.2e-16 90.5 193 38.9
AT1G07985 Arabidopsis thaliana HOM05D007629 ORTHO05D009511 1.5e-16 90.1 111 50.5
BcaC05g24715 Brassica carinata HOM05D007629 ORTHO05D009511 1.5e-16 90.1 107 51.4
BraA08t35446Z Brassica rapa HOM05D000280 ORTHO05D000632 3.4e-16 89.0 108 50.0
BolC5t29361H Brassica oleracea HOM05D000280 ORTHO05D000632 1.3e-15 87.0 106 50.0
BcaB02g06696 Brassica carinata HOM05D007629 ORTHO05D009511 1.1e-14 84.0 106 49.1
Sp1g06620 Schrenkiella parvula HOM05D007629 ORTHO05D009511 1.4e-14 83.6 106 51.9
BraA06t23712Z Brassica rapa HOM05D000280 ORTHO05D000632 3.1e-14 82.4 107 47.7
Rhsim01G0129300 Rhododendron simsii HOM05D007629 ORTHO05D009511 3.1e-14 82.4 121 46.3
Carub.0001s0734 Capsella rubella HOM05D007629 ORTHO05D009511 9.2e-14 80.9 107 48.6
ATR0332G023 Amborella trichopoda HOM05D007629 ORTHO05D009511 1.2e-13 80.5 136 45.6
CARHR007770 Cardamine hirsuta HOM05D007629 ORTHO05D009511 1.2e-13 80.5 104 49.0
BcaC07g42509 Brassica carinata HOM05D007629 ORTHO05D009511 2.0e-13 79.7 146 38.4
Hund16629 Selenicereus undatus HOM05D007629 ORTHO05D009511 2.0e-13 79.7 131 43.5
BraA09t41945Z Brassica rapa HOM05D001466 ORTHO05D001452 1.3e-12 77.0 114 42.1
A09p66070 Brassica napus HOM05D001466 ORTHO05D001452 1.7e-12 76.6 114 42.1
CDE10G0639 Ceratophyllum demersum HOM05D007629 ORTHO05D009511 1.7e-12 76.6 130 42.3
Thhalv10009537m.g Eutrema salsugineum HOM05D007629 ORTHO05D009511 2.9e-12 75.9 108 49.1
BcaB03g13359 Brassica carinata HOM05D007629 ORTHO05D009511 3.8e-12 75.5 106 46.2
CDE05G0903 Ceratophyllum demersum HOM05D007629 ORTHO05D009511 1.5e-11 73.6 97 45.4
CDE05G1807 Ceratophyllum demersum HOM05D007629 ORTHO05D009511 2.1e-10 69.7 134 35.8
CDE05G3301 Ceratophyllum demersum HOM05D007629 ORTHO05D009511 2.1e-10 69.7 135 39.3
Peaxi162Scf00953g00011 Petunia axillaris HOM05D007629 ORTHO05D009511 2.8e-10 69.3 81 49.4
C08p50220 Brassica napus HOM05D001466 ORTHO05D001452 1.0e-09 67.4 114 42.1
Ah.10g038830 Amaranthus hybridus HOM05D007629 ORTHO05D009511 7.5e-08 61.2 89 46.1
AUR62023067 Chenopodium quinoa HOM05D007629 ORTHO05D009511 7.5e-08 61.2 147 38.8
Sopen01g034240 Solanum pennellii HOM05D007629 ORTHO05D009511 3.7e-07 58.9 48 56.2
CDE10G1066 Ceratophyllum demersum HOM05D007629 ORTHO05D009511 8.3e-07 57.8 120 37.5
SHI04088 Sapria himalayana HOM05D007629 ORTHO05D009511 2.4e-06 56.2 91 39.6
SEGI_12647 Sequoiadendron giganteum HOM05D057847 ORTHO05D009511 4.1e-06 55.5 103 36.9
SEGI_40980 Sequoiadendron giganteum HOM05D057847 ORTHO05D009511 4.1e-06 55.5 103 36.9
BolC8t52551H Brassica oleracea HOM05D001466 ORTHO05D001452 5.4e-06 55.1 110 32.7


User provided reference genes

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