Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.G03357 Eucalyptus grandis HOM05D003606 ORTHO05D004650 3.7e-181 638.6 408 100.0
TWI32G0899 Tripterygium wilfordii HOM05D003606 ORTHO05D004650 2.6e-158 562.8 406 87.9
Actinidia02534 Actinidia chinensis HOM05D000009 ORTHO05D004650 2.4e-156 556.2 409 85.3
Sabra09G0042600 Salix brachista HOM05D003606 ORTHO05D004650 4.1e-156 555.4 401 85.0
PGR031G1688 Punica granatum HOM05D003606 ORTHO05D004650 5.4e-156 555.1 403 87.1
Potri.009G058000 Populus trichocarpa HOM05D003606 ORTHO05D004650 7.0e-156 554.7 397 90.2
TWI34G0860 Tripterygium wilfordii HOM05D003606 ORTHO05D004650 4.6e-155 552.0 406 87.4
Dinv09318 Davidia involucrata HOM05D003606 ORTHO05D004650 1.3e-154 550.4 408 87.5
Ciclev10015115m.g Citrus clementina HOM05D003606 ORTHO05D004650 8.6e-154 547.7 408 74.8
GSVIVG01032166001 Vitis vinifera HOM05D003606 ORTHO05D004650 8.6e-154 547.7 406 87.4
MELO3C023992.2 Cucumis melo HOM05D003606 ORTHO05D004650 2.5e-153 546.2 409 86.3
CsaV3_3G031990 Cucumis sativus L. HOM05D003606 ORTHO05D004650 2.5e-153 546.2 409 86.3
Atru.chr11.2590 Acer truncatum HOM05D003606 ORTHO05D004650 3.3e-153 545.8 408 88.5
CiPaw.05G162700 Carya illinoinensis HOM05D003606 ORTHO05D004650 1.6e-152 543.5 408 86.5
Dinv43413 Davidia involucrata HOM05D003606 ORTHO05D004650 2.1e-152 543.1 408 87.0
Cpa.g.sc19.249 Carica papaya HOM05D003606 ORTHO05D004650 4.7e-152 542.0 404 78.0
Cc02_g29020 Coffea canephora HOM05D003606 ORTHO05D004650 4.7e-152 542.0 397 88.2
Manes.10G139000 Manihot esculenta HOM05D003606 ORTHO05D004650 4.7e-152 542.0 408 86.5
HanXRQChr17g0563081 Helianthus annuus HOM05D003606 ORTHO05D004650 6.2e-152 541.6 409 81.9
Sc23g0005910 Simmondsia chinensis HOM05D003606 ORTHO05D004650 1.1e-151 540.8 401 86.3
Lj5g0022697 Lotus japonicus HOM05D003606 ORTHO05D004650 1.4e-151 540.4 406 86.7
Nitab4.5_0001284g0090 Nicotiana tabacum HOM05D003606 ORTHO05D004650 1.4e-151 540.4 408 76.5
Nn5g28763 Nelumbo nucifera HOM05D003606 ORTHO05D004650 4.0e-151 538.9 402 80.6
HanXRQChr16g0524861 Helianthus annuus HOM05D003606 ORTHO05D004650 6.8e-151 538.1 409 87.0
Phvul.004G092500 Phaseolus vulgaris HOM05D003606 ORTHO05D004650 2.0e-150 536.6 411 85.2
Gohir.A08G142700 Gossypium hirsutum HOM05D003606 ORTHO05D004650 2.6e-150 536.2 408 87.0
PSO675G6796 Papaver somniferum HOM05D003606 ORTHO05D004650 2.6e-150 536.2 408 80.4
Gohir.D08G163700 Gossypium hirsutum HOM05D003606 ORTHO05D004650 3.4e-150 535.8 408 87.0
Sed0024972 Sechium edule HOM05D003606 ORTHO05D004650 4.4e-150 535.4 409 85.6
Cfa010803 Carpinus fangiana HOM05D003606 ORTHO05D004650 5.8e-150 535.0 405 87.4
Rhsim07G0058400 Rhododendron simsii HOM05D003606 ORTHO05D004650 5.8e-150 535.0 412 86.4
VMungo0464G1676 Vigna mungo HOM05D003606 ORTHO05D004650 5.8e-150 535.0 411 84.2
Gorai.004G170600 Gossypium raimondii HOM05D003606 ORTHO05D004650 7.5e-150 534.6 408 86.8
Haze_03155 Corylus avellana HOM05D003606 ORTHO05D004650 9.8e-150 534.3 406 86.9
CiPaw.05G024300 Carya illinoinensis HOM05D003606 ORTHO05D004650 2.2e-149 533.1 408 86.5
CDE02G3858 Ceratophyllum demersum HOM05D003606 ORTHO05D004650 2.9e-149 532.7 408 84.6
Glyma.16G165100 Glycine max HOM05D003606 ORTHO05D004650 2.9e-149 532.7 408 84.1
MSTRG.2635 Avicennia marina HOM05D003606 ORTHO05D004650 6.4e-149 531.6 396 85.9
Lalb_Chr21g0315701 Lupinus albus HOM05D003606 ORTHO05D004650 6.4e-149 531.6 405 85.7
COL.COLO4_04879 Corchorus olitorius HOM05D003606 ORTHO05D004650 1.1e-148 530.8 408 85.0
Duzib138G0203 Durio zibethinus HOM05D003606 ORTHO05D004650 1.4e-148 530.4 407 84.8
Thecc.01G407200 Theobroma cacao HOM05D003606 ORTHO05D004650 1.4e-148 530.4 408 85.5
Lj3A990T71 Lonicera japonica HOM05D003606 ORTHO05D004650 2.4e-148 529.6 409 84.4
vmacro13693 Vaccinium macrocarpon HOM05D003606 ORTHO05D004650 5.4e-148 528.5 414 85.5
Solyc03g112530.3 Solanum lycopersicum HOM05D003606 ORTHO05D004650 7.1e-148 528.1 412 78.6
Sopen03g031590 Solanum pennellii HOM05D003606 ORTHO05D004650 7.1e-148 528.1 412 78.6
PGSC0003DMG400018107 Solanum tuberosum HOM05D003606 ORTHO05D004650 1.2e-147 527.3 412 78.6
ECA234G3512 Erigeron canadensis HOM05D003606 ORTHO05D004650 2.1e-147 526.6 409 81.2
Prupe.2G020500 Prunus persica HOM05D003606 ORTHO05D004650 1.0e-146 524.2 408 85.5
CAN.G338.7 Capsicum annuum HOM05D003606 ORTHO05D004650 1.3e-146 523.9 409 80.7
AUR62029807 Chenopodium quinoa HOM05D003606 ORTHO05D004650 8.6e-146 521.2 428 72.4
SalBow4G1900 Salvia bowleyana HOM05D003606 ORTHO05D004650 1.1e-145 520.8 415 69.4
Migut.D00412 Erythranthe guttata HOM05D003606 ORTHO05D004650 1.5e-145 520.4 404 83.2
THA.LOC104819092 Tarenaya hassleriana HOM05D003606 ORTHO05D004650 1.5e-145 520.4 407 72.7
AUR62023088 Chenopodium quinoa HOM05D003606 ORTHO05D004650 4.3e-145 518.8 428 72.2
Glyma.02G080600 Glycine max HOM05D003606 ORTHO05D004650 5.6e-145 518.5 403 84.1
PSO541G2647 Papaver somniferum HOM05D003606 ORTHO05D004650 1.6e-144 516.9 403 79.2
DCAR_003761 Daucus carota HOM05D003606 ORTHO05D004650 2.8e-144 516.2 406 84.2
Lsat_1_v5_gn_4_31941 Lactuca sativa HOM05D003606 ORTHO05D004650 1.4e-143 513.8 409 84.8
SGA_v2.0_scaffold1G00601 Striga asiatica HOM05D003606 ORTHO05D004650 6.8e-143 511.5 398 83.9
TPR.G14490 Trifolium pratense HOM05D003606 ORTHO05D004650 4.4e-142 508.8 392 74.7
Ca_19553_v3 Cicer arietinum L. HOM05D003606 ORTHO05D004650 1.3e-141 507.3 408 73.0
Ah.10g038660 Amaranthus hybridus HOM05D003606 ORTHO05D004650 1.4e-140 503.8 413 73.1
Psat6g110240 Pisum sativum HOM05D003606 ORTHO05D004650 1.9e-140 503.4 410 72.4
Medtr1g054300 Medicago truncatula HOM05D003606 ORTHO05D004650 7.1e-140 501.5 399 73.2
RcHm_v2.0_Chr1g0317321 Rosa chinensis HOM05D003606 ORTHO05D004650 1.6e-139 500.4 404 74.3
SGA_v2.0_scaffold138G35254 Striga asiatica HOM05D003606 ORTHO05D004650 2.1e-139 500.0 406 79.6
MD17G1287700 Malus domestica HOM05D003606 ORTHO05D004650 1.7e-138 496.9 404 82.7
ClCG10G012220 Citrullus lanatus HOM05D003606 ORTHO05D004650 2.3e-138 496.5 424 77.1
FAN01G0800 Fragaria x ananassa HOM05D003606 ORTHO05D004650 5.1e-138 495.4 409 73.6
FAN03G2659 Fragaria x ananassa HOM05D003606 ORTHO05D004650 7.3e-137 491.5 409 73.1
FAN10G3084 Fragaria x ananassa HOM05D003606 ORTHO05D004650 1.6e-136 490.3 409 72.9
FvH4_7g01500 Fragaria vesca HOM05D003606 ORTHO05D004650 1.1e-135 487.6 409 72.6
FAN06G2132 Fragaria x ananassa HOM05D003606 ORTHO05D004650 3.1e-135 486.1 409 68.0
Aqoxy2G00153 Aquilegia oxysepala HOM05D003606 ORTHO05D004650 4.0e-135 485.7 391 83.6
MD02G1305600 Malus domestica HOM05D003606 ORTHO05D004650 1.5e-134 483.8 403 74.4
ATR0626G036 Amborella trichopoda HOM05D003606 ORTHO05D004650 4.4e-134 482.3 396 68.7
Nitab4.5_0012005g0010 Nicotiana tabacum HOM05D003606 ORTHO05D004650 7.6e-134 481.5 408 70.6
Os11g0594200 Oryza sativa ssp. japonica HOM05D003606 ORTHO05D004650 9.9e-134 481.1 390 81.3
AT5G52820 Arabidopsis thaliana HOM05D003606 ORTHO05D004650 1.7e-133 480.3 394 78.9
Sp6g14980 Schrenkiella parvula HOM05D003606 ORTHO05D004650 8.4e-133 478.0 390 79.2
Manes.07G008500 Manihot esculenta HOM05D003606 ORTHO05D004650 1.4e-132 477.2 408 80.6
BcaB05g21983 Brassica carinata HOM05D003606 ORTHO05D004650 2.4e-132 476.5 392 78.3
Zm00001eb297740 Zea mays HOM05D003606 ORTHO05D004650 4.2e-132 475.7 388 80.9
BcaC03g14497 Brassica carinata HOM05D003606 ORTHO05D004650 7.1e-132 474.9 404 76.2
C02p19350 Brassica napus HOM05D003606 ORTHO05D004650 7.1e-132 474.9 404 76.2
BolC2t08070H Brassica oleracea HOM05D003606 ORTHO05D004650 7.1e-132 474.9 404 76.2
Thhalv10013442m.g Eutrema salsugineum HOM05D003606 ORTHO05D004650 7.1e-132 474.9 392 78.1
Peaxi162Scf00089g01530 Petunia axillaris HOM05D003606 ORTHO05D004650 9.3e-132 474.6 409 78.7
Oeu025828.1 Olea europaea HOM05D003606 ORTHO05D004650 1.2e-131 474.2 519 63.8
Aa31LG3G9060 Aethionema arabicum HOM05D003606 ORTHO05D004650 6.0e-131 471.9 393 78.9
AL8G27260 Arabidopsis lyrata HOM05D003606 ORTHO05D004650 7.8e-131 471.5 391 78.3
Carub.0008s1298 Capsella rubella HOM05D003606 ORTHO05D004650 1.3e-130 470.7 390 78.7
A02p11600 Brassica napus HOM05D003606 ORTHO05D004650 3.9e-130 469.2 404 75.7
BraA02t06222Z Brassica rapa HOM05D003606 ORTHO05D004650 3.9e-130 469.2 404 75.7
Os10g0104500 Oryza sativa ssp. japonica HOM05D003606 ORTHO05D004650 8.7e-130 468.0 406 78.8
arahy.Tifrunner.gnm1.ann1.V59V4E Arachis hypogaea HOM05D003606 ORTHO05D004650 2.5e-129 466.5 411 78.6
arahy.Tifrunner.gnm1.ann1.F9F3MK Arachis hypogaea HOM05D003606 ORTHO05D004650 2.8e-128 463.0 411 78.8
QL06p005538 Quercus lobata HOM05D003606 ORTHO05D004650 2.8e-128 463.0 363 84.6
CARHR265750 Cardamine hirsuta HOM05D003606 ORTHO05D004650 3.6e-128 462.6 403 71.2
arahy.Tifrunner.gnm1.ann1.GAUK41 Arachis hypogaea HOM05D003606 ORTHO05D004650 4.8e-128 462.2 411 78.6
TAR633G2243 Trochodendron aralioides HOM05D003606 ORTHO05D004650 3.1e-127 459.5 521 62.6
Hund21610 Selenicereus undatus HOM05D003606 ORTHO05D004650 5.8e-126 455.3 436 65.8
SHI00285 Sapria himalayana HOM05D003606 ORTHO05D004650 4.9e-125 452.2 426 64.8
SEGI_00890 Sequoiadendron giganteum HOM05D003606 ORTHO05D004650 2.1e-123 446.8 408 68.1
arahy.Tifrunner.gnm1.ann1.ZXEF1Z Arachis hypogaea HOM05D003606 ORTHO05D004650 2.7e-123 446.4 412 66.3
CANSAT01G2566 Cannabis sativa HOM05D003606 ORTHO05D004650 9.0e-119 431.4 399 73.2
BcaB08g35635 Brassica carinata HOM05D003606 ORTHO05D004650 9.9e-118 427.9 393 59.8
Thhalv10025051m.g Eutrema salsugineum HOM05D003606 ORTHO05D004650 4.6e-115 419.1 406 59.9
Pp3c1_35350 Physcomitrium patens HOM05D003606 ORTHO05D004650 1.4e-111 407.5 391 68.8
BcaC04g20537 Brassica carinata HOM05D003606 ORTHO05D004650 3.4e-110 402.9 417 55.6
BolC7t45366H Brassica oleracea HOM05D003606 ORTHO05D004650 1.7e-109 400.6 394 59.9
C09p70260 Brassica napus HOM05D003606 ORTHO05D004650 6.5e-109 398.7 413 58.6
CBR_g38286 Chara braunii HOM05D003606 ORTHO05D004650 6.5e-109 398.7 390 59.2
AagrBONN_evm.TU.Sc2ySwM_344.4930 Anthoceros agrestis HOM05D003606 ORTHO05D004650 1.4e-108 397.5 396 65.4
BcaC06g33533 Brassica carinata HOM05D003606 ORTHO05D004650 1.4e-108 397.5 419 57.3
BcaNung04664 Brassica carinata HOM05D003606 ORTHO05D004650 1.4e-108 397.5 398 59.8
BcaNung04849 Brassica carinata HOM05D003606 ORTHO05D004650 2.5e-108 396.7 404 59.4
BolC9t59770H Brassica oleracea HOM05D003606 ORTHO05D004650 2.5e-108 396.7 404 59.4
unitig_26.g10141 Utricularia gibba HOM05D003606 ORTHO05D004650 1.6e-107 394.0 426 58.2
SGA_v2.0_scaffold90G27689 Striga asiatica HOM05D003606 ORTHO05D004650 3.0e-106 389.8 391 73.7
Mapoly0082s0085 Marchantia polymorpha HOM05D003606 ORTHO05D004650 3.9e-106 389.4 391 66.2
PSO541G4704 Papaver somniferum HOM05D003606 ORTHO05D004650 1.1e-105 387.9 369 62.6
C07p48580 Brassica napus HOM05D003606 ORTHO05D004650 3.7e-104 382.9 428 55.1
HPP92_026819 Vanilla planifolia HOM05D003606 ORTHO05D004650 1.1e-103 381.3 445 49.0
AUR62009405 Chenopodium quinoa HOM05D003606 ORTHO05D004650 3.1e-103 379.8 407 66.3
SMO259G0032 Selaginella moellendorffii HOM05D003606 ORTHO05D004650 4.2e-100 369.4 410 54.6
A10p29890 Brassica napus HOM05D003606 ORTHO05D004650 2.6e-94 350.1 413 52.1
TPR.G7603 Trifolium pratense HOM05D003606 ORTHO05D004650 1.2e-91 341.3 335 64.2
MCO05G213 Micromonas commoda HOM05D003606 ORTHO05D004650 5.1e-90 335.9 387 53.0
Hund00228 Selenicereus undatus HOM05D003606 ORTHO05D004650 4.3e-89 332.8 366 57.1
MD09G1280600 Malus domestica HOM05D003606 ORTHO05D004650 2.2e-85 320.5 315 67.6
BcaC06g32566 Brassica carinata HOM05D003606 ORTHO05D004650 3.9e-82 309.7 386 48.2
BcaNung05838 Brassica carinata HOM05D003606 ORTHO05D004650 5.9e-78 295.8 387 45.2
PRCOL_00003575 Prasinoderma coloniale HOM05D003606 ORTHO05D004650 1.3e-77 294.7 420 48.1
Ca_22822_v3 Cicer arietinum L. HOM05D003606 ORTHO05D000002 3.6e-75 286.6 197 69.0
COL.COLO4_04880 Corchorus olitorius HOM05D003606 ORTHO05D004650 3.1e-71 273.5 293 75.1
BraA10t45027Z Brassica rapa HOM05D003606 ORTHO05D004650 3.5e-70 270.0 256 64.8
Haze_26363 Corylus avellana HOM05D003606 ORTHO05D004650 2.2e-69 267.3 398 43.5
HanXRQChr15g0491881 Helianthus annuus HOM05D003606 ORTHO05D004650 2.7e-67 260.4 194 68.6
Cre01.g000600 Chlamydomonas reinhardtii HOM05D003606 ORTHO05D004650 4.7e-67 259.6 388 50.3
BraA10t43107Z Brassica rapa HOM05D003606 ORTHO05D004650 2.2e-64 250.8 251 61.0
A10p10270 Brassica napus HOM05D003606 ORTHO05D004650 3.1e-63 246.9 251 60.6
CSS0037178 Camellia sinensis var. sinensis HOM05D003606 ORTHO05D004650 1.5e-52 211.5 103 95.1
BolC9t57121H Brassica oleracea HOM05D003606 ORTHO05D004650 4.4e-49 199.9 299 41.1
Sc03g0002540 Simmondsia chinensis HOM05D003606 ORTHO05D004650 1.7e-48 198.0 125 76.8
C09p42410 Brassica napus HOM05D003606 ORTHO05D004650 2.2e-48 197.6 299 41.5
AUR62034729 Chenopodium quinoa HOM05D003606 ORTHO05D004650 2.2e-48 197.6 103 87.4
CSS0009389 Camellia sinensis var. sinensis HOM05D003606 ORTHO05D004650 1.1e-47 195.3 134 73.1
Manes.07G009860 Manihot esculenta HOM05D003606 ORTHO05D004650 3.6e-43 180.3 88 92.0
Cfa026891 Carpinus fangiana HOM05D003606 ORTHO05D004650 8.6e-37 159.1 398 34.7
BcaC06g33525 Brassica carinata HOM05D003606 ORTHO05D004650 8.1e-35 152.5 104 67.3
BraA10t45028Z Brassica rapa HOM05D003606 ORTHO05D004650 2.9e-32 144.1 95 72.6
Oeu060950.1 Olea europaea HOM05D003606 ORTHO05D016710 8.3e-32 142.5 186 45.2
BcaNung04851 Brassica carinata HOM05D003606 ORTHO05D004650 2.4e-31 141.0 102 68.6
TAR636G3369 Trochodendron aralioides HOM05D003606 ORTHO05D003127 8.6e-29 132.5 148 50.0
MD09G1280700 Malus domestica HOM05D003606 ORTHO05D004650 5.6e-28 129.8 81 76.5
Medtr0421s0030 Medicago truncatula HOM05D003606 ORTHO05D004650 1.1e-26 125.6 84 72.6
SalBow4G2833 Salvia bowleyana HOM05D003606 ORTHO05D004650 4.4e-25 120.2 299 37.1
CSS0038697 Camellia sinensis var. sinensis HOM05D003606 ORTHO05D016710 8.4e-24 115.9 57 87.7
BolC9t57120H Brassica oleracea HOM05D003606 ORTHO05D033191 8.6e-21 105.9 90 56.7
TPR.G39665 Trifolium pratense HOM05D003606 ORTHO05D033191 1.5e-20 105.1 68 69.1
SMO259G0025 Selaginella moellendorffii HOM05D003606 ORTHO05D004650 5.6e-20 103.2 50 82.0
GSVIVG01032170001 Vitis vinifera HOM05D003606 ORTHO05D004650 3.1e-18 97.4 63 71.4
BcaC01g02187 Brassica carinata HOM05D003606 ORTHO05D016710 2.6e-17 94.4 120 65.0
QL06p005531 Quercus lobata HOM05D011240 ORTHO05D014254 2.6e-17 94.4 44 95.5
TAR636G2756 Trochodendron aralioides HOM05D003606 ORTHO05D004650 1.7e-16 91.7 43 95.3
COL.COLO4_24393 Corchorus olitorius HOM05D003606 ORTHO05D004650 6.4e-16 89.7 103 47.6
C09p42400 Brassica napus HOM05D003606 ORTHO05D033191 8.4e-16 89.4 79 51.9
Eucgr.G03346 Eucalyptus grandis HOM05D003606 ORTHO05D004650 3.2e-15 87.4 45 86.7
Hund00229 Selenicereus undatus HOM05D003606 ORTHO05D004650 3.2e-15 87.4 43 88.4
C02p14020 Brassica napus HOM05D003606 ORTHO05D016710 2.3e-13 81.3 164 32.9
Eucgr.G03354 Eucalyptus grandis HOM05D003606 ORTHO05D004650 2.3e-13 81.3 103 46.6
CSS0009074 Camellia sinensis var. sinensis HOM05D003606 ORTHO05D043277 6.6e-13 79.7 40 90.0
CSS0037126 Camellia sinensis var. sinensis HOM05D003606 ORTHO05D043277 6.6e-13 79.7 40 90.0
Oeu060951.1 Olea europaea HOM05D003606 ORTHO05D004650 7.3e-12 76.3 38 86.8
BolC2t07520H Brassica oleracea HOM05D003606 ORTHO05D016710 8.1e-11 72.8 46 67.4
CANSAT51G0014 Cannabis sativa HOM05D003606 ORTHO05D004650 1.4e-10 72.0 83 45.8
TPR.G8471 Trifolium pratense HOM05D003606 ORTHO05D004650 1.5e-09 68.6 40 75.0
CSS0046585 Camellia sinensis var. sinensis HOM05D003606 ORTHO05D004650 9.3e-07 59.3 54 57.4
THA.LOC104821238 Tarenaya hassleriana HOM05D002634 ORTHO05D003100 4.6e-06 57.0 72 38.9


User provided reference genes

Program Settings