Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.G03216 Eucalyptus grandis HOM05D005138 ORTHO05D006318 3.2e-119 431.8 219 100.0
PGR044G2178 Punica granatum HOM05D005138 ORTHO05D006318 1.9e-60 236.5 133 86.5
Duzib128G1035 Durio zibethinus HOM05D005138 ORTHO05D006318 3.1e-58 229.2 133 84.2
Gorai.011G218700 Gossypium raimondii HOM05D005138 ORTHO05D006318 4.1e-58 228.8 133 84.2
Duzib114G0920 Durio zibethinus HOM05D005138 ORTHO05D006318 5.3e-58 228.4 133 83.5
Gohir.D10G195900 Gossypium hirsutum HOM05D005138 ORTHO05D006318 1.2e-57 227.3 133 83.5
Gohir.A10G188000 Gossypium hirsutum HOM05D005138 ORTHO05D006318 4.5e-57 225.3 133 82.7
Thecc.10G149000 Theobroma cacao HOM05D005138 ORTHO05D006318 4.5e-57 225.3 133 82.7
MD07G1047200 Malus domestica HOM05D005138 ORTHO05D006318 5.9e-57 224.9 133 82.0
CiPaw.14G008900 Carya illinoinensis HOM05D005138 ORTHO05D006318 1.7e-56 223.4 133 80.5
RcHm_v2.0_Chr1g0325871 Rosa chinensis HOM05D005138 ORTHO05D006318 1.7e-56 223.4 133 81.2
Manes.04G157100 Manihot esculenta HOM05D005138 ORTHO05D006318 5.0e-56 221.9 133 80.5
TAR362G0697 Trochodendron aralioides HOM05D005138 ORTHO05D006318 5.0e-56 221.9 133 79.7
Prupe.2G041500 Prunus persica HOM05D005138 ORTHO05D006318 6.5e-56 221.5 133 80.5
Cpa.g.sc169.49 Carica papaya HOM05D005138 ORTHO05D006318 8.5e-56 221.1 133 82.7
FvH4_7g03540 Fragaria vesca HOM05D005138 ORTHO05D006318 8.5e-56 221.1 133 79.7
FAN03G2670 Fragaria x ananassa HOM05D005138 ORTHO05D006318 8.5e-56 221.1 133 79.7
FAN06G4838 Fragaria x ananassa HOM05D005138 ORTHO05D006318 8.5e-56 221.1 133 79.7
MD02G1279300 Malus domestica HOM05D005138 ORTHO05D006318 8.5e-56 221.1 137 77.4
CiPaw.13G015300 Carya illinoinensis HOM05D005138 ORTHO05D006318 1.1e-55 220.7 131 81.7
FAN10G0593 Fragaria x ananassa HOM05D005138 ORTHO05D006318 1.1e-55 220.7 133 79.7
FAN10G2449 Fragaria x ananassa HOM05D005138 ORTHO05D006318 1.1e-55 220.7 133 79.7
Hma1.2p1_0837F.1_g226140 Hydrangea macrophylla HOM05D005138 ORTHO05D006318 1.4e-55 220.3 133 78.9
Haze_03004 Corylus avellana HOM05D005138 ORTHO05D006318 1.9e-55 219.9 131 80.2
Atru.chr12.1279 Acer truncatum HOM05D005138 ORTHO05D006318 2.5e-55 219.5 133 78.2
Cfa010943 Carpinus fangiana HOM05D005138 ORTHO05D006318 2.5e-55 219.5 131 79.4
Manes.11G007200 Manihot esculenta HOM05D005138 ORTHO05D006318 2.5e-55 219.5 133 80.5
vmacro10390 Vaccinium macrocarpon HOM05D005138 ORTHO05D006318 5.5e-55 218.4 133 77.4
Sed0002262 Sechium edule HOM05D005138 ORTHO05D006318 7.2e-55 218.0 133 76.7
Dinv44706 Davidia involucrata HOM05D005138 ORTHO05D006318 1.6e-54 216.9 131 78.6
CANSAT56G0322 Cannabis sativa HOM05D005138 ORTHO05D006318 3.6e-54 215.7 133 78.2
HanXRQChr11g0341771 Helianthus annuus HOM05D005138 ORTHO05D006318 3.6e-54 215.7 133 78.2
MELO3C012486.2 Cucumis melo HOM05D005138 ORTHO05D006318 7.9e-54 214.5 141 75.2
Zm00001eb001400 Zea mays HOM05D005138 ORTHO05D006318 1.0e-53 214.2 133 78.2
THA.LOC104826756 Tarenaya hassleriana HOM05D005138 ORTHO05D006318 3.0e-53 212.6 134 76.1
PSO384G1335 Papaver somniferum HOM05D005138 ORTHO05D006318 3.9e-53 212.2 133 75.9
CsaV3_5G036890 Cucumis sativus L. HOM05D005138 ORTHO05D006318 6.7e-53 211.5 128 78.9
PSO135G0826 Papaver somniferum HOM05D005138 ORTHO05D006318 6.7e-53 211.5 133 75.9
CDE04G1620 Ceratophyllum demersum HOM05D005138 ORTHO05D006318 8.7e-53 211.1 133 76.7
Os07g0640100 Oryza sativa ssp. japonica HOM05D005138 ORTHO05D006318 1.5e-52 210.3 131 78.6
Actinidia34769 Actinidia chinensis HOM05D005138 ORTHO05D006318 1.9e-52 209.9 133 78.9
Ciclev10002826m.g Citrus clementina HOM05D005138 ORTHO05D006318 1.9e-52 209.9 133 74.4
Lsat_1_v5_gn_1_116501 Lactuca sativa HOM05D005138 ORTHO05D006318 1.9e-52 209.9 138 73.9
MBI13_g09225_MAGBIO Magnolia biondii HOM05D005138 ORTHO05D006318 2.5e-52 209.5 133 75.2
DCAR_029715 Daucus carota HOM05D005138 ORTHO05D006318 4.3e-52 208.8 133 75.2
QL04p018722 Quercus lobata HOM05D005138 ORTHO05D006318 2.8e-51 206.1 132 74.2
TWI74G0500 Tripterygium wilfordii HOM05D005138 ORTHO05D006318 3.7e-51 205.7 133 74.4
Aqoxy2G00421 Aquilegia oxysepala HOM05D005138 ORTHO05D006318 4.8e-51 205.3 131 76.3
THA.LOC104799320 Tarenaya hassleriana HOM05D005138 ORTHO05D006318 1.8e-50 203.4 134 75.4
CSS0020361 Camellia sinensis var. sinensis HOM05D005138 ORTHO05D006318 4.1e-50 202.2 130 73.8
AUR62031745 Chenopodium quinoa HOM05D005138 ORTHO05D006318 4.1e-50 202.2 125 76.8
AUR62032630 Chenopodium quinoa HOM05D005138 ORTHO05D006318 4.1e-50 202.2 125 76.8
Aa31LG3G6480 Aethionema arabicum HOM05D005138 ORTHO05D006318 6.9e-50 201.4 134 75.4
Cc07_g21240 Coffea canephora HOM05D005138 ORTHO05D006318 9.1e-50 201.1 131 71.8
Thhalv10021751m.g Eutrema salsugineum HOM05D005138 ORTHO05D006318 9.1e-50 201.1 134 75.4
SGA_v2.0_scaffold43G16284 Striga asiatica HOM05D005138 ORTHO05D006318 9.1e-50 201.1 133 72.9
BcaC09g48226 Brassica carinata HOM05D005138 ORTHO05D006318 1.5e-49 200.3 134 74.6
C01p53060 Brassica napus HOM05D005138 ORTHO05D006318 1.5e-49 200.3 134 74.6
C03p45540 Brassica napus HOM05D005138 ORTHO05D006318 1.5e-49 200.3 134 74.6
Sp3g10480 Schrenkiella parvula HOM05D005138 ORTHO05D006318 2.0e-49 199.9 134 74.6
BcaB04g18689 Brassica carinata HOM05D005138 ORTHO05D006318 3.4e-49 199.1 134 73.9
Hund13385 Selenicereus undatus HOM05D005138 ORTHO05D006318 3.4e-49 199.1 125 76.8
A03p37550 Brassica napus HOM05D005138 ORTHO05D006318 4.5e-49 198.7 134 73.9
HPP92_021197 Vanilla planifolia HOM05D005138 ORTHO05D006318 7.7e-49 198.0 136 74.3
CARHR086810 Cardamine hirsuta HOM05D005138 ORTHO05D006318 1.0e-48 197.6 134 73.1
Sopen01g016660 Solanum pennellii HOM05D005138 ORTHO05D006318 1.3e-48 197.2 131 72.5
AL3G23920 Arabidopsis lyrata HOM05D005138 ORTHO05D006318 1.7e-48 196.8 134 72.4
Carub.0003s1162 Capsella rubella HOM05D005138 ORTHO05D006318 1.7e-48 196.8 134 72.4
arahy.Tifrunner.gnm1.ann1.EVE7SV Arachis hypogaea HOM05D005138 ORTHO05D006318 2.9e-48 196.1 131 71.0
arahy.Tifrunner.gnm1.ann1.K7P4IE Arachis hypogaea HOM05D005138 ORTHO05D006318 2.9e-48 196.1 131 71.0
SGA_v2.0_scaffold232G43489 Striga asiatica HOM05D005138 ORTHO05D006318 2.9e-48 196.1 133 72.2
ATR1096G082 Amborella trichopoda HOM05D005138 ORTHO05D006318 3.8e-48 195.7 131 70.2
Aqoxy2G00420 Aquilegia oxysepala HOM05D000001 ORTHO05D007291 5.0e-48 195.3 129 74.4
Solyc01g022750.3 Solanum lycopersicum HOM05D005138 ORTHO05D006318 5.0e-48 195.3 131 71.8
AT3G12260 Arabidopsis thaliana HOM05D005138 ORTHO05D006318 6.5e-48 194.9 134 71.6
Nitab4.5_0010402g0010 Nicotiana tabacum HOM05D005138 ORTHO05D006318 1.1e-47 194.1 131 70.2
Hund15745 Selenicereus undatus HOM05D005138 ORTHO05D006318 1.4e-47 193.7 133 73.7
BolC3t16831H Brassica oleracea HOM05D005138 ORTHO05D006318 2.5e-47 193.0 143 69.9
BolC5t34219H Brassica oleracea HOM05D005138 ORTHO05D006318 3.2e-47 192.6 143 69.9
unitig_899.g15579 Utricularia gibba HOM05D005138 ORTHO05D006318 3.2e-47 192.6 133 71.4
C05p55530 Brassica napus HOM05D005138 ORTHO05D006318 4.2e-47 192.2 143 69.9
BraA03t12909Z Brassica rapa HOM05D005138 ORTHO05D006318 4.2e-47 192.2 144 69.4
Sc10g0004520 Simmondsia chinensis HOM05D005138 ORTHO05D006318 4.2e-47 192.2 126 73.0
Lalb_Chr03g0032141 Lupinus albus HOM05D005138 ORTHO05D006318 5.5e-47 191.8 144 68.8
BolC1t05249H Brassica oleracea HOM05D005138 ORTHO05D006318 9.4e-47 191.0 147 68.0
Psat4g099920 Pisum sativum HOM05D005138 ORTHO05D006318 9.4e-47 191.0 132 68.9
Ah.10g030100 Amaranthus hybridus HOM05D005138 ORTHO05D006318 1.6e-46 190.3 133 70.7
Ah.12g059980 Amaranthus hybridus HOM05D005138 ORTHO05D006318 1.6e-46 190.3 125 74.4
Phvul.011G203300 Phaseolus vulgaris HOM05D005138 ORTHO05D006318 1.6e-46 190.3 133 68.4
A05p37100 Brassica napus HOM05D005138 ORTHO05D006318 2.1e-46 189.9 141 69.5
BraA05t22507Z Brassica rapa HOM05D005138 ORTHO05D006318 2.1e-46 189.9 141 69.5
Migut.N01855 Erythranthe guttata HOM05D005138 ORTHO05D006318 2.1e-46 189.9 133 69.9
Ca_23972_v3 Cicer arietinum L. HOM05D005138 ORTHO05D006318 2.7e-46 189.5 132 68.2
PGSC0003DMG400004276 Solanum tuberosum HOM05D005138 ORTHO05D006318 2.7e-46 189.5 133 66.9
Medtr8g040150 Medicago truncatula HOM05D005138 ORTHO05D006318 3.6e-46 189.1 132 68.2
EL10Ac2g02769 Beta vulgaris HOM05D005138 ORTHO05D000392 4.6e-46 188.7 123 73.2
Glyma.15G231900 Glycine max HOM05D005138 ORTHO05D006318 4.6e-46 188.7 141 68.1
Potri.001G029900 Populus trichocarpa HOM05D005138 ORTHO05D006318 6.1e-46 188.3 134 69.4
Sabra01G0021400 Salix brachista HOM05D005138 ORTHO05D006318 6.1e-46 188.3 134 69.4
Lj3g0022103 Lotus japonicus HOM05D005138 ORTHO05D006318 1.0e-45 187.6 134 67.9
CAN.G1362.7 Capsicum annuum HOM05D005138 ORTHO05D006318 1.4e-45 187.2 127 71.7
TWI38G0338 Tripterygium wilfordii HOM05D005138 ORTHO05D006318 1.4e-45 187.2 132 65.2
VMungo1127G1184 Vigna mungo HOM05D005138 ORTHO05D006318 1.8e-45 186.8 133 67.7
TPR.G8538 Trifolium pratense HOM05D005138 ORTHO05D006318 3.0e-45 186.0 132 66.7
Glyma.13G193600 Glycine max HOM05D005138 ORTHO05D006318 3.9e-45 185.7 129 69.0
MSTRG.5074 Avicennia marina HOM05D005138 ORTHO05D006318 1.3e-43 180.6 133 67.7
Glyma.09G091002 Glycine max HOM05D005138 ORTHO05D006318 1.3e-43 180.6 129 67.4
Nitab4.5_0004389g0010 Nicotiana tabacum HOM05D005138 ORTHO05D006318 2.8e-43 179.5 158 57.6
SalBow5G1163 Salvia bowleyana HOM05D005138 ORTHO05D006318 7.7e-41 171.4 172 51.7
Nitab4.5_0000254g0180 Nicotiana tabacum HOM05D005138 ORTHO05D006318 1.1e-39 167.5 131 65.6
Peaxi162Scf00062g02216 Petunia axillaris HOM05D005138 ORTHO05D006318 2.5e-39 166.4 140 59.3
ECA248G2587 Erigeron canadensis HOM05D005138 ORTHO05D006318 7.9e-38 161.4 104 76.0
Peaxi162Scf01042g00115 Petunia axillaris HOM05D005138 ORTHO05D006318 1.7e-35 153.7 131 58.8
Actinidia38920 Actinidia chinensis HOM05D005138 ORTHO05D006318 1.8e-34 150.2 131 62.6
Mapoly0055s0110 Marchantia polymorpha HOM05D005138 ORTHO05D006318 1.8e-34 150.2 130 56.2
Pp3c1_37620 Physcomitrium patens HOM05D005138 ORTHO05D006318 2.6e-33 146.4 129 56.6
GSVIVG01036643001 Vitis vinifera HOM05D005138 ORTHO05D006318 1.0e-32 144.4 95 73.7
Pp3c2_3180 Physcomitrium patens HOM05D005138 ORTHO05D006318 1.3e-32 144.1 129 55.8
PGSC0003DMG400005271 Solanum tuberosum HOM05D005138 ORTHO05D006318 4.2e-31 139.0 93 69.9
CBR_g52457 Chara braunii HOM05D005138 ORTHO05D006318 1.2e-30 137.5 134 53.0
Gorai.004G120800 Gossypium raimondii HOM05D005138 ORTHO05D006318 4.0e-29 132.5 75 86.7
Gohir.A10G188200 Gossypium hirsutum HOM05D005138 ORTHO05D006318 3.3e-28 129.4 75 85.3
COL.COLO4_20706 Corchorus olitorius HOM05D005138 ORTHO05D006318 7.5e-28 128.3 71 87.3
Gohir.D03G123000 Gossypium hirsutum HOM05D005138 ORTHO05D006318 2.2e-27 126.7 73 86.3
Rhsim09G0131900 Rhododendron simsii HOM05D005138 ORTHO05D006318 5.3e-26 122.1 72 81.9
ClCG05G026950 Citrullus lanatus HOM05D005138 ORTHO05D006318 1.2e-25 120.9 76 75.0
Lj2A602G38 Lonicera japonica HOM05D005138 ORTHO05D006318 7.7e-25 118.2 71 76.1
BcaC01g04057 Brassica carinata HOM05D005138 ORTHO05D006318 4.2e-23 112.5 73 75.3
RcHm_v2.0_Chr1g0325941 Rosa chinensis HOM05D005138 ORTHO05D006318 1.2e-22 110.9 78 73.1
Lalb_Chr19g0132971 Lupinus albus HOM05D005138 ORTHO05D006318 2.7e-22 109.8 72 75.0
ClCG00G004230 Citrullus lanatus HOM05D005138 ORTHO05D006318 3.6e-22 109.4 62 83.9
ClCG05G026940 Citrullus lanatus HOM05D005138 ORTHO05D006318 3.6e-22 109.4 62 83.9
Nn7g36804 Nelumbo nucifera HOM05D005138 ORTHO05D006318 1.4e-21 107.5 71 71.8
COL.COLO4_20705 Corchorus olitorius HOM05D005138 ORTHO05D006318 1.2e-20 104.4 62 79.0
PGSC0003DMG401025557 Solanum tuberosum HOM05D005138 ORTHO05D006318 1.5e-20 104.0 72 69.4
MD07G1046900 Malus domestica HOM05D005138 ORTHO05D006318 3.4e-20 102.8 62 77.4
SMO364G0517 Selaginella moellendorffii HOM05D005138 ORTHO05D006318 9.8e-20 101.3 127 38.6
CAN.G575.4 Capsicum annuum HOM05D005138 ORTHO05D006318 1.3e-19 100.9 77 62.3
Atru.chr10.1194 Acer truncatum HOM05D005527 ORTHO05D006480 2.2e-16 90.1 77 61.0
Lalb_Chr19g0132981 Lupinus albus HOM05D005138 ORTHO05D006318 3.6e-14 82.8 64 64.1
Oeu064133.1 Olea europaea HOM05D005138 ORTHO05D006318 8.0e-14 81.6 56 67.9
SEGI_36145 Sequoiadendron giganteum HOM05D005138 ORTHO05D006318 1.4e-13 80.9 74 51.4
AUR62042115 Chenopodium quinoa HOM05D005138 ORTHO05D006318 4.0e-13 79.3 53 71.7
MCO10G366 Micromonas commoda HOM05D005138 ORTHO05D006318 3.4e-12 76.3 116 36.2
VMungo0464G2031 Vigna mungo HOM05D005138 ORTHO05D011906 8.3e-11 71.6 58 58.6
Cre12.g555250 Chlamydomonas reinhardtii HOM05D005138 ORTHO05D006318 2.9e-08 63.2 112 31.2
SEGI_02182 Sequoiadendron giganteum HOM05D005138 ORTHO05D006318 2.9e-08 63.2 74 36.5
PRCOL_00003180 Prasinoderma coloniale HOM05D000737 ORTHO05D000581 1.5e-07 60.8 104 29.8


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