Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.G03196 Eucalyptus grandis HOM05D007678 ORTHO05D009658 1.1e-128 463.4 249 100.0
PGR031G1114 Punica granatum HOM05D007678 ORTHO05D009658 3.8e-76 288.9 220 68.6
Prupe.2G048500 Prunus persica HOM05D007678 ORTHO05D009658 2.3e-73 279.6 229 66.4
Actinidia01693 Actinidia chinensis HOM05D007678 ORTHO05D009658 1.1e-72 277.3 234 63.2
RcHm_v2.0_Chr1g0328821 Rosa chinensis HOM05D007678 ORTHO05D009658 5.6e-72 275.0 231 64.1
Potri.001G033500 Populus trichocarpa HOM05D007678 ORTHO05D009658 7.3e-72 274.6 251 61.4
QL04p021923 Quercus lobata HOM05D007678 ORTHO05D009658 1.2e-71 273.9 224 66.1
FAN10G0661 Fragaria x ananassa HOM05D007678 ORTHO05D009658 6.2e-71 271.6 231 62.8
FvH4_7g04260 Fragaria vesca HOM05D007678 ORTHO05D009658 8.1e-71 271.2 232 63.4
Atru.chr2.1713_Atru.chr2.1714 Acer truncatum HOM05D007678 ORTHO05D009658 2.6e-69 266.2 230 62.6
Nn7g37012 Nelumbo nucifera HOM05D007678 ORTHO05D009658 5.8e-69 265.0 232 61.6
Dinv31528 Davidia involucrata HOM05D007678 ORTHO05D009658 9.9e-69 264.2 219 64.8
MD02G1272300 Malus domestica HOM05D007678 ORTHO05D009658 2.2e-68 263.1 216 65.3
Lalb_Chr17g0337231 Lupinus albus HOM05D007678 ORTHO05D009658 6.0e-66 255.0 217 62.7
Medtr7g009670 Medicago truncatula HOM05D007678 ORTHO05D009658 7.8e-66 254.6 233 61.4
Lj1g0010481 Lotus japonicus HOM05D007678 ORTHO05D009658 2.3e-65 253.1 213 63.4
Duzib106G1843 Durio zibethinus HOM05D007678 ORTHO05D009658 3.0e-65 252.7 230 61.3
Haze_02966 Corylus avellana HOM05D007678 ORTHO05D009658 5.1e-65 251.9 235 60.9
HanXRQChr12g0376111 Helianthus annuus HOM05D007678 ORTHO05D009658 1.1e-64 250.8 225 60.9
TAR623G0324 Trochodendron aralioides HOM05D007678 ORTHO05D009658 4.3e-64 248.8 230 60.4
Ca_04109_v3 Cicer arietinum L. HOM05D007678 ORTHO05D009658 5.6e-64 248.4 228 60.5
Ca_04118_v3 Cicer arietinum L. HOM05D007678 ORTHO05D009658 5.6e-64 248.4 228 60.5
Glyma.09G240200 Glycine max HOM05D007678 ORTHO05D009658 7.3e-64 248.1 235 61.3
EL10Ac2g02701 Beta vulgaris HOM05D007678 ORTHO05D009658 9.6e-64 247.7 213 63.4
Sabra01G0023800 Salix brachista HOM05D007678 ORTHO05D009658 1.3e-63 247.3 263 56.3
Psat3g196520 Pisum sativum HOM05D007678 ORTHO05D009658 1.6e-63 246.9 217 61.3
TWI38G1059 Tripterygium wilfordii HOM05D007678 ORTHO05D009658 1.6e-63 246.9 233 57.9
Hund13420 Selenicereus undatus HOM05D007678 ORTHO05D009658 8.1e-63 244.6 215 63.3
Thecc.10G137600 Theobroma cacao HOM05D007678 ORTHO05D009658 1.1e-62 244.2 231 58.4
Sed0019894 Sechium edule HOM05D000001 ORTHO05D000003 1.5e-61 240.4 253 53.4
Manes.04G155050 Manihot esculenta HOM05D007678 ORTHO05D009658 2.6e-61 239.6 299 50.5
FAN06G1516 Fragaria x ananassa HOM05D007678 ORTHO05D009658 4.5e-61 238.8 263 53.6
ECA248G0545 Erigeron canadensis HOM05D007678 ORTHO05D009658 1.3e-60 237.3 214 58.9
Gohir.D10G198600 Gossypium hirsutum HOM05D007678 ORTHO05D009658 1.3e-60 237.3 213 61.0
MELO3C034052.2 Cucumis melo HOM05D007678 ORTHO05D009658 3.8e-60 235.7 257 51.0
Gorai.011G222500 Gossypium raimondii HOM05D007678 ORTHO05D009658 4.9e-60 235.3 213 60.6
Solyc10g081280.2 Solanum lycopersicum HOM05D007678 ORTHO05D009658 1.1e-59 234.2 218 59.6
PGSC0003DMG401028118 Solanum tuberosum HOM05D007678 ORTHO05D009658 1.1e-59 234.2 218 60.1
Ah.12g064780 Amaranthus hybridus HOM05D007678 ORTHO05D009658 1.9e-59 233.4 224 58.5
ATR0307G037 Amborella trichopoda HOM05D007678 ORTHO05D009658 2.4e-59 233.0 217 59.9
Sopen10g031780 Solanum pennellii HOM05D007678 ORTHO05D009658 2.4e-59 233.0 218 59.2
MBI13_g30074_MAGBIO Magnolia biondii HOM05D007678 ORTHO05D009658 2.7e-58 229.6 207 62.3
Lsat_1_v5_gn_7_114920 Lactuca sativa HOM05D007678 ORTHO05D009658 6.0e-58 228.4 233 57.1
QL04p022035 Quercus lobata HOM05D007678 ORTHO05D009658 5.1e-57 225.3 190 64.7
Sc10g0003150 Simmondsia chinensis HOM05D007678 ORTHO05D009658 1.9e-56 223.4 238 55.9
arahy.Tifrunner.gnm1.ann1.EB95VJ Arachis hypogaea HOM05D007678 ORTHO05D009658 2.5e-56 223.0 222 58.1
DCAR_001914 Daucus carota HOM05D007678 ORTHO05D009658 1.3e-55 220.7 214 57.5
COL.COLO4_04659 Corchorus olitorius HOM05D007678 ORTHO05D009658 2.8e-55 219.5 239 55.2
Oeu044217.3 Olea europaea HOM05D007678 ORTHO05D009658 1.1e-54 217.6 249 50.6
SalBow6G2419 Salvia bowleyana HOM05D007678 ORTHO05D009658 1.1e-54 217.6 248 52.4
CAN.G128.118 Capsicum annuum HOM05D001269 ORTHO05D001083 9.0e-54 214.5 193 62.7
Peaxi162Scf00153g00057 Petunia axillaris HOM05D007678 ORTHO05D009658 2.6e-53 213.0 195 61.0
vmacro20847 Vaccinium macrocarpon HOM05D007678 ORTHO05D009658 2.2e-52 209.9 248 52.0
Migut.J01589 Erythranthe guttata HOM05D007678 ORTHO05D009658 8.4e-52 208.0 213 54.0
HPP92_018248 Vanilla planifolia HOM05D007678 ORTHO05D009658 8.4e-52 208.0 226 51.3
Gohir.A10G190900 Gossypium hirsutum HOM05D007678 ORTHO05D009658 1.1e-51 207.6 192 59.9
CiPaw.14G011000 Carya illinoinensis HOM05D007678 ORTHO05D009658 4.6e-50 202.2 185 60.5
CsaV3_5G029470 Cucumis sativus L. HOM05D007678 ORTHO05D000003 7.9e-50 201.4 213 53.1
CDE09G0612 Ceratophyllum demersum HOM05D007678 ORTHO05D009658 1.3e-49 200.7 185 57.3
AUR62031676 Chenopodium quinoa HOM05D007678 ORTHO05D009658 3.0e-49 199.5 168 63.7
Nitab4.5_0008005g0010 Nicotiana tabacum HOM05D007678 ORTHO05D009658 3.0e-49 199.5 183 60.7
VMungo1383G0210 Vigna mungo HOM05D000430 ORTHO05D009658 6.7e-49 198.4 156 67.3
unitig_37.g12769 Utricularia gibba HOM05D007678 ORTHO05D009658 1.5e-48 197.2 205 52.7
Zm00001eb303400 Zea mays HOM05D007678 ORTHO05D009658 9.6e-48 194.5 207 53.6
Rhsim01G0121700 Rhododendron simsii HOM05D007678 ORTHO05D009658 1.4e-46 190.7 147 68.0
Nitab4.5_0000062g0570 Nicotiana tabacum HOM05D007678 ORTHO05D009658 2.4e-46 189.9 190 57.9
Glyma.18G256300 Glycine max HOM05D007678 ORTHO05D009658 6.9e-46 188.3 212 54.7
arahy.Tifrunner.gnm1.ann1.L3S1G4 Arachis hypogaea HOM05D007678 ORTHO05D009658 2.5e-43 179.9 198 53.5
CBR_g30334 Chara braunii HOM05D007678 ORTHO05D009658 6.3e-39 165.2 231 39.8
Mapoly0003s0067 Marchantia polymorpha HOM05D007678 ORTHO05D009658 2.4e-38 163.3 207 41.5
Pp3c18_7980 Physcomitrium patens HOM05D007678 ORTHO05D009658 7.6e-37 158.3 206 40.8
CANSAT56G0191 Cannabis sativa HOM05D007678 ORTHO05D009658 3.8e-36 156.0 132 62.9
Cpa.g.sc33.162 Carica papaya HOM05D007678 ORTHO05D009658 9.4e-35 151.4 98 80.6
Cc06_g20600 Coffea canephora HOM05D007678 ORTHO05D009658 2.8e-31 139.8 135 57.0
SMO174G0167 Selaginella moellendorffii HOM05D007678 ORTHO05D009658 8.2e-31 138.3 183 40.4
TPR.G8973 Trifolium pratense HOM05D007678 ORTHO05D009658 2.4e-30 136.7 98 70.4
QL04p021970 Quercus lobata HOM05D007678 ORTHO05D009658 3.8e-28 129.4 108 65.7
TPR.G4277 Trifolium pratense HOM05D007678 ORTHO05D009658 7.2e-27 125.2 137 54.0
Phvul.008G043200 Phaseolus vulgaris HOM05D007678 ORTHO05D009658 9.4e-27 124.8 123 57.7
arahy.Tifrunner.gnm1.ann1.1DGF2A Arachis hypogaea HOM05D007678 ORTHO05D009658 1.6e-26 124.0 94 64.9
Lsat_1_v5_gn_5_155661 Lactuca sativa HOM05D007678 ORTHO05D009658 5.3e-22 109.0 204 38.7
Cc06_g20610 Coffea canephora HOM05D007678 ORTHO05D009658 1.7e-20 104.0 85 61.2
arahy.Tifrunner.gnm1.ann1.6E2HM0 Arachis hypogaea HOM05D007678 ORTHO05D009658 8.5e-20 101.7 78 67.9
CSS0047660 Camellia sinensis var. sinensis HOM05D007678 ORTHO05D009658 2.3e-17 93.6 60 75.0
PRCOL_00006709 Prasinoderma coloniale HOM05D007678 ORTHO05D009658 2.8e-15 86.7 183 27.9
arahy.Tifrunner.gnm1.ann1.78M82M Arachis hypogaea HOM05D007678 ORTHO05D009658 2.6e-13 80.1 64 70.3
MCO01G505 Micromonas commoda HOM05D007678 ORTHO05D009658 7.7e-13 78.6 135 30.4
QL04p021975 Quercus lobata HOM05D007678 ORTHO05D009658 9.4e-11 71.6 64 59.4
arahy.Tifrunner.gnm1.ann1.BX3238 Arachis hypogaea HOM05D007678 ORTHO05D009658 2.1e-10 70.5 59 59.3
GSVIVG01012452001 Vitis vinifera HOM05D007678 ORTHO05D009658 1.4e-09 67.8 80 50.0
arahy.Tifrunner.gnm1.ann1.Q44M57 Arachis hypogaea HOM05D006052 ORTHO05D007319 6.7e-09 65.5 48 64.6
FAN03G1326 Fragaria x ananassa HOM05D001392 ORTHO05D006407 1.2e-08 64.7 91 45.1
QL02p047905 Quercus lobata HOM05D007678 ORTHO05D009658 2.4e-06 57.0 49 57.1


User provided reference genes

Program Settings