Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.G03110 Eucalyptus grandis HOM05D002744 ORTHO05D008989 5.8e-101 370.9 191 100.0
Ciclev10032836m.g Citrus clementina HOM05D002744 ORTHO05D008989 2.9e-76 288.9 191 77.5
Dinv21809 Davidia involucrata HOM05D002744 ORTHO05D008989 2.7e-74 282.3 191 76.4
PGR142G3983 Punica granatum HOM05D002744 ORTHO05D008989 2.7e-74 282.3 187 76.5
GSVIVG01032723001 Vitis vinifera HOM05D002744 ORTHO05D008989 3.0e-73 278.9 191 75.4
Thecc.10G007100 Theobroma cacao HOM05D002744 ORTHO05D008989 5.6e-72 274.6 191 74.3
CiPaw.02G197300 Carya illinoinensis HOM05D002744 ORTHO05D008989 1.3e-71 273.5 192 72.9
Gohir.D04G071200 Gossypium hirsutum HOM05D002744 ORTHO05D008989 3.6e-71 271.9 191 72.8
Gohir.A05G332500 Gossypium hirsutum HOM05D002744 ORTHO05D008989 1.4e-70 270.0 193 72.5
QL08p064284 Quercus lobata HOM05D002744 ORTHO05D008989 1.8e-70 269.6 191 73.8
Haze_17321 Corylus avellana HOM05D002744 ORTHO05D008989 6.9e-70 267.7 192 73.4
arahy.Tifrunner.gnm1.ann1.HIE7A8 Arachis hypogaea HOM05D002744 ORTHO05D008989 1.7e-68 263.1 192 70.3
RcHm_v2.0_Chr1g0371481 Rosa chinensis HOM05D002744 ORTHO05D008989 1.7e-68 263.1 194 71.1
Cc02_g05720 Coffea canephora HOM05D002744 ORTHO05D008989 2.2e-68 262.7 188 71.8
Actinidia00986 Actinidia chinensis HOM05D002744 ORTHO05D008989 6.4e-68 261.2 192 71.9
Duzib114G0765 Durio zibethinus HOM05D002744 ORTHO05D008989 6.4e-68 261.2 193 71.0
Hund13513 Selenicereus undatus HOM05D002744 ORTHO05D008989 1.9e-67 259.6 188 71.3
Glyma.11G234700 Glycine max HOM05D002744 ORTHO05D008989 4.2e-67 258.5 191 70.2
Gorai.012G080100 Gossypium raimondii HOM05D002744 ORTHO05D008989 9.3e-67 257.3 203 68.5
Cpa.g.sc19.99 Carica papaya HOM05D002744 ORTHO05D008989 1.2e-66 256.9 181 74.0
Nitab4.5_0000928g0050 Nicotiana tabacum HOM05D002744 ORTHO05D008989 1.2e-66 256.9 191 71.7
arahy.Tifrunner.gnm1.ann1.N80L0Z Arachis hypogaea HOM05D002744 ORTHO05D008989 1.6e-66 256.5 189 68.3
Glyma.18G022300 Glycine max HOM05D002744 ORTHO05D008989 1.6e-66 256.5 192 70.3
Rhsim09G0182800 Rhododendron simsii HOM05D002744 ORTHO05D008989 1.6e-66 256.5 188 71.8
Sed0024728 Sechium edule HOM05D002744 ORTHO05D008989 1.6e-66 256.5 192 69.3
Nn2g11068 Nelumbo nucifera HOM05D002744 ORTHO05D008989 2.1e-66 256.1 189 71.4
TWI38G2197 Tripterygium wilfordii HOM05D002744 ORTHO05D008989 3.5e-66 255.4 187 69.0
Peaxi162Scf00284g00123 Petunia axillaris HOM05D002744 ORTHO05D008989 6.0e-66 254.6 192 69.3
arahy.Tifrunner.gnm1.ann1.B5C26Y Arachis hypogaea HOM05D002744 ORTHO05D008989 1.0e-65 253.8 191 67.5
MD07G1229300 Malus domestica HOM05D002744 ORTHO05D008989 1.8e-65 253.1 191 69.6
Manes.10G008400 Manihot esculenta HOM05D002744 ORTHO05D008989 3.9e-65 251.9 187 68.4
AUR62022976 Chenopodium quinoa HOM05D002744 ORTHO05D008989 6.7e-65 251.1 185 69.7
FvH4_7g25501 Fragaria vesca HOM05D002744 ORTHO05D008989 6.7e-65 251.1 191 66.5
CsaV3_5G010720 Cucumis sativus L. HOM05D002744 ORTHO05D008989 1.5e-64 250.0 194 68.0
FAN06G0491 Fragaria x ananassa HOM05D002744 ORTHO05D006546 1.5e-64 250.0 191 66.0
COL.COLO4_25825 Corchorus olitorius HOM05D002744 ORTHO05D006546 2.5e-64 249.2 173 72.8
FAN03G1008 Fragaria x ananassa HOM05D002744 ORTHO05D006546 2.5e-64 249.2 191 66.0
EL10Ac2g04293 Beta vulgaris HOM05D002744 ORTHO05D008989 5.6e-64 248.1 187 68.4
FAN10G0428 Fragaria x ananassa HOM05D002744 ORTHO05D006546 5.6e-64 248.1 191 65.4
Sp5g06290 Schrenkiella parvula HOM05D002744 ORTHO05D008989 9.6e-64 247.3 183 68.9
Phvul.001G248100 Phaseolus vulgaris HOM05D002744 ORTHO05D008989 1.3e-63 246.9 192 66.7
Potri.008G075600 Populus trichocarpa HOM05D002744 ORTHO05D008989 1.3e-63 246.9 188 68.1
Sopen02g021690 Solanum pennellii HOM05D002744 ORTHO05D008989 2.1e-63 246.1 192 67.2
CANSAT56G2966 Cannabis sativa HOM05D002744 ORTHO05D008989 2.8e-63 245.7 192 65.6
MD01G1161400 Malus domestica HOM05D002744 ORTHO05D008989 2.8e-63 245.7 191 68.1
Thhalv10006252m.g Eutrema salsugineum HOM05D002744 ORTHO05D008989 6.2e-63 244.6 190 66.3
BcaB08g34630 Brassica carinata HOM05D002744 ORTHO05D008989 1.8e-62 243.0 183 68.3
Hma1.2p1_1240F.1_g269640 Hydrangea macrophylla HOM05D002744 ORTHO05D008989 1.8e-62 243.0 159 78.0
Ca_15179_v3 Cicer arietinum L. HOM05D002744 ORTHO05D008989 2.4e-62 242.7 192 66.1
HanXRQChr17g0560791 Helianthus annuus HOM05D002744 ORTHO05D008989 9.0e-62 240.7 193 63.7
AT3G56210 Arabidopsis thaliana HOM05D002744 ORTHO05D008989 2.6e-61 239.2 182 66.5
vmacro09984 Vaccinium macrocarpon HOM05D002744 ORTHO05D008989 3.4e-61 238.8 220 60.9
PSO017G6389 Papaver somniferum HOM05D002744 ORTHO05D008989 4.5e-61 238.4 193 63.2
Lju41C22T0 Lonicera japonica HOM05D002744 ORTHO05D008989 5.8e-61 238.0 159 78.6
Atru.BG.256.p Acer truncatum HOM05D002744 ORTHO05D008989 7.6e-61 237.7 154 79.2
Carub.0005s2299 Capsella rubella HOM05D002744 ORTHO05D008989 7.6e-61 237.7 184 65.8
Lj8C58T1 Lonicera japonica HOM05D002744 ORTHO05D008989 1.7e-60 236.5 159 78.0
AL5G37530 Arabidopsis lyrata HOM05D002744 ORTHO05D008989 2.9e-60 235.7 184 64.7
TPR.G28641 Trifolium pratense HOM05D002744 ORTHO05D008989 2.9e-60 235.7 192 65.6
Sabra08G0056200 Salix brachista HOM05D002744 ORTHO05D008989 3.8e-60 235.3 188 65.4
Nitab4.5_0000263g0100 Nicotiana tabacum HOM05D002744 ORTHO05D008989 4.9e-60 235.0 161 75.2
PSO170G0776 Papaver somniferum HOM05D002744 ORTHO05D008989 4.9e-60 235.0 194 61.9
Medtr3g072120 Medicago truncatula HOM05D002744 ORTHO05D008989 6.4e-60 234.6 193 65.3
MSTRG.12212 Avicennia marina HOM05D002744 ORTHO05D008989 8.4e-60 234.2 182 65.9
DCAR_011891 Daucus carota HOM05D002744 ORTHO05D008989 8.4e-60 234.2 156 76.3
Migut.A01076 Erythranthe guttata HOM05D002744 ORTHO05D008989 8.4e-60 234.2 189 65.1
THA.LOC104824346 Tarenaya hassleriana HOM05D002744 ORTHO05D008989 1.1e-59 233.8 183 63.4
ECA233G4001 Erigeron canadensis HOM05D002744 ORTHO05D008989 1.9e-59 233.0 195 62.1
Lj6g0011522 Lotus japonicus HOM05D002744 ORTHO05D008989 1.9e-59 233.0 194 64.9
BraA09t40372Z Brassica rapa HOM05D002744 ORTHO05D008989 2.4e-59 232.6 192 64.1
A09p49190 Brassica napus HOM05D002744 ORTHO05D008989 3.2e-59 232.3 184 65.8
Lalb_Chr08g0231351 Lupinus albus HOM05D002744 ORTHO05D008989 4.6e-58 228.4 188 61.7
FAN01G1994 Fragaria x ananassa HOM05D002744 ORTHO05D006546 1.0e-57 227.3 213 56.8
AUR62012334 Chenopodium quinoa HOM05D002744 ORTHO05D008989 3.0e-57 225.7 153 73.2
CSS0017108 Camellia sinensis var. sinensis HOM05D002744 ORTHO05D006546 1.1e-56 223.8 160 72.5
CARHR166360 Cardamine hirsuta HOM05D002744 ORTHO05D008989 9.6e-56 220.7 163 66.9
VMungo1383G3724 Vigna mungo HOM05D002744 ORTHO05D008989 2.8e-55 219.2 160 68.1
SalBow3G4547 Salvia bowleyana HOM05D002744 ORTHO05D008989 8.1e-55 217.6 182 62.1
Lsat_1_v5_gn_8_13401 Lactuca sativa HOM05D002744 ORTHO05D008989 1.1e-54 217.2 155 71.0
Os03g0665800 Oryza sativa ssp. japonica HOM05D002744 ORTHO05D008989 1.1e-54 217.2 166 65.7
TAR369G0133 Trochodendron aralioides HOM05D000826 ORTHO05D001831 6.9e-54 214.5 142 73.9
SGA_v2.0_scaffold36G14267 Striga asiatica HOM05D002744 ORTHO05D008989 2.0e-53 213.0 181 64.6
BcaC07g39936 Brassica carinata HOM05D002744 ORTHO05D008989 2.2e-52 209.5 142 76.1
C08p31530 Brassica napus HOM05D002744 ORTHO05D008989 2.2e-52 209.5 142 76.1
HPP92_013966 Vanilla planifolia HOM05D002744 ORTHO05D008989 2.2e-52 209.5 168 64.9
Hma1.2p1_1240F.1_g269630 Hydrangea macrophylla HOM05D002744 ORTHO05D008989 1.4e-51 206.8 133 78.2
EL10Ac2g04295 Beta vulgaris HOM05D002744 ORTHO05D008989 1.2e-50 203.8 144 72.9
Oeu026180.1 Olea europaea HOM05D002744 ORTHO05D008989 1.2e-50 203.8 137 75.9
Prupe.2G259500 Prunus persica HOM05D002744 ORTHO05D008989 8.7e-49 197.6 123 82.9
ATR0681G046 Amborella trichopoda HOM05D000826 ORTHO05D008989 1.9e-48 196.4 184 57.6
Lj1A963T49 Lonicera japonica HOM05D002744 ORTHO05D008989 1.6e-47 193.4 111 86.5
unitig_32.g11706 Utricularia gibba HOM05D002744 ORTHO05D008989 2.8e-47 192.6 178 56.7
unitig_33.g30211 Utricularia gibba HOM05D002744 ORTHO05D008989 2.8e-47 192.6 178 56.7
BcaB01g00016 Brassica carinata HOM05D002744 ORTHO05D008989 9.0e-46 187.6 152 65.8
ClCG07G004800 Citrullus lanatus HOM05D002744 ORTHO05D008989 1.2e-45 187.2 194 56.7
Zm00001eb065520 Zea mays HOM05D002744 ORTHO05D008989 4.5e-45 185.3 126 70.6
CDE02G4284 Ceratophyllum demersum HOM05D002744 ORTHO05D008989 5.9e-45 184.9 132 71.2
SEGI_09795 Sequoiadendron giganteum HOM05D002744 ORTHO05D008989 6.5e-44 181.4 162 59.9
BolC8t50775H Brassica oleracea HOM05D002744 ORTHO05D008989 1.9e-43 179.9 183 54.6
PGSC0003DMG400010239 Solanum tuberosum HOM05D002744 ORTHO05D008989 2.7e-42 176.0 125 75.2
Solyc02g076790.4 Solanum lycopersicum HOM05D002744 ORTHO05D008989 2.3e-41 172.9 125 72.8
BcaB01g00017 Brassica carinata HOM05D002744 ORTHO05D008989 7.4e-40 167.9 167 56.9
TAR623G0678 Trochodendron aralioides HOM05D002744 ORTHO05D008989 9.7e-40 167.5 122 73.0
MELO3C020107.2 Cucumis melo HOM05D002744 ORTHO05D008989 4.8e-39 165.2 194 49.5
Aa31LG10G11120 Aethionema arabicum HOM05D002744 ORTHO05D008989 3.8e-36 155.6 117 68.4
SEGI_38813 Sequoiadendron giganteum HOM05D002744 ORTHO05D008989 3.6e-34 149.1 115 65.2
Gohir.A10G240750 Gossypium hirsutum HOM05D002744 ORTHO05D008989 1.5e-32 143.7 124 62.9
Psat5g130160 Pisum sativum HOM05D002744 ORTHO05D008989 4.1e-30 135.6 102 69.6
Hma1.2p1_0322F.1_g124790 Hydrangea macrophylla HOM05D002744 ORTHO05D008989 5.3e-30 135.2 152 49.3
Mapoly0001s0439 Marchantia polymorpha HOM05D002744 ORTHO05D008989 4.5e-29 132.1 154 45.5
CDE01G0559 Ceratophyllum demersum HOM05D002744 ORTHO05D008989 9.4e-27 124.4 143 51.0
Sc10g0002800 Simmondsia chinensis HOM05D002744 ORTHO05D008989 1.6e-26 123.6 131 54.2
Pp3c8_1670 Physcomitrium patens HOM05D002744 ORTHO05D008989 1.8e-17 93.6 98 45.9
C06p23580 Brassica napus HOM05D002744 ORTHO05D008989 7.0e-14 81.6 55 67.3
Psat5g125520 Pisum sativum HOM05D002744 ORTHO05D008989 2.9e-12 76.3 61 63.9
SMO147G0318 Selaginella moellendorffii HOM05D002744 ORTHO05D008989 2.5e-11 73.2 113 38.1
CAN.G118.19 Capsicum annuum HOM05D002744 ORTHO05D008989 2.2e-07 60.1 48 66.7


User provided reference genes

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