Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.G03091 Eucalyptus grandis HOM05D006653 ORTHO05D008346 2.6e-158 562.0 283 100.0
Cfa001271 Carpinus fangiana HOM05D006653 ORTHO05D008346 7.7e-110 401.0 255 69.8
CSS0019013 Camellia sinensis var. sinensis HOM05D006653 ORTHO05D008346 1.5e-108 396.7 255 69.8
Hma1.2p1_1013F.1_g247760 Hydrangea macrophylla HOM05D006653 ORTHO05D008346 1.2e-107 393.7 255 69.8
Actinidia29724 Actinidia chinensis HOM05D006653 ORTHO05D008346 1.6e-107 393.3 255 69.4
Cc02_g06010 Coffea canephora HOM05D006653 ORTHO05D008346 6.1e-107 391.3 254 67.3
TWI53G0670 Tripterygium wilfordii HOM05D006653 ORTHO05D008346 2.0e-105 386.3 255 68.6
QL08p063830 Quercus lobata HOM05D006653 ORTHO05D008346 5.7e-105 384.8 251 68.1
Prupe.2G256500 Prunus persica HOM05D006653 ORTHO05D008346 1.7e-104 383.3 256 69.1
CiPaw.01G301500 Carya illinoinensis HOM05D006653 ORTHO05D008346 2.2e-104 382.9 252 67.9
Potri.008G073200 Populus trichocarpa HOM05D006653 ORTHO05D008346 2.2e-104 382.9 255 67.5
Haze_17274 Corylus avellana HOM05D006653 ORTHO05D008346 6.3e-104 381.3 291 61.9
Haze_17283 Corylus avellana HOM05D006653 ORTHO05D008346 3.1e-103 379.0 291 61.5
Nn2g13243 Nelumbo nucifera HOM05D006653 ORTHO05D008346 7.0e-103 377.9 255 67.1
Glyma.18G024100 Glycine max HOM05D006653 ORTHO05D008346 5.9e-102 374.8 254 66.9
Thecc.10G010700 Theobroma cacao HOM05D006653 ORTHO05D008346 2.2e-101 372.9 252 68.3
Gorai.011G290500 Gossypium raimondii HOM05D006653 ORTHO05D008346 2.9e-101 372.5 249 67.1
Oeu001415.1 Olea europaea HOM05D006653 ORTHO05D008346 6.5e-101 371.3 254 65.4
Duzib106G1369 Durio zibethinus HOM05D006653 ORTHO05D008346 3.2e-100 369.0 252 67.9
PGR142G3637 Punica granatum HOM05D006653 ORTHO05D008346 1.6e-99 366.7 233 70.4
Medtr3g071640 Medicago truncatula HOM05D006653 ORTHO05D008346 2.7e-99 365.9 256 63.3
MD01G1158200 Malus domestica HOM05D006653 ORTHO05D008346 3.6e-99 365.5 255 66.7
PSO801G0584 Papaver somniferum HOM05D006653 ORTHO05D008346 3.6e-99 365.5 252 65.5
PSO339G4279 Papaver somniferum HOM05D006653 ORTHO05D008346 1.0e-98 364.0 252 65.5
Aqoxy2G00794 Aquilegia oxysepala HOM05D006653 ORTHO05D008346 1.4e-98 363.6 254 64.2
MD07G1226900 Malus domestica HOM05D006653 ORTHO05D008346 1.4e-98 363.6 255 67.1
Lj6g0008682 Lotus japonicus HOM05D006653 ORTHO05D008346 1.8e-98 363.2 255 64.3
FAN06G1821 Fragaria x ananassa HOM05D006653 ORTHO05D008346 3.0e-98 362.5 259 65.3
GSVIVG01032749001 Vitis vinifera HOM05D006653 ORTHO05D008346 3.0e-98 362.5 252 66.7
Peaxi162Scf01149g00326 Petunia axillaris HOM05D006653 ORTHO05D008346 5.2e-98 361.7 255 63.9
Migut.F00634 Erythranthe guttata HOM05D006653 ORTHO05D008346 8.8e-98 360.9 252 64.7
Nitab4.5_0003391g0090 Nicotiana tabacum HOM05D006653 ORTHO05D008346 8.8e-98 360.9 249 65.9
Ciclev10032369m.g Citrus clementina HOM05D006653 ORTHO05D008346 2.0e-97 359.8 252 62.3
Nitab4.5_0000789g0140 Nicotiana tabacum HOM05D006653 ORTHO05D008346 3.4e-97 359.0 253 64.0
Ca_15156_v3 Cicer arietinum L. HOM05D006653 ORTHO05D008346 7.5e-97 357.8 256 62.1
CsaV3_5G010530 Cucumis sativus L. HOM05D006653 ORTHO05D008346 7.5e-97 357.8 252 63.9
MSTRG.27303 Avicennia marina HOM05D006653 ORTHO05D008346 1.7e-96 356.7 252 64.7
Lalb_Chr23g0277111 Lupinus albus HOM05D006653 ORTHO05D008346 1.7e-96 356.7 252 61.9
Phvul.001G246100 Phaseolus vulgaris HOM05D006653 ORTHO05D008346 1.7e-96 356.7 252 63.1
SGA_v2.0_scaffold60G20961 Striga asiatica HOM05D006653 ORTHO05D008346 2.2e-96 356.3 252 63.9
Sopen05g030990 Solanum pennellii HOM05D006653 ORTHO05D008346 2.8e-96 355.9 252 64.3
Sed0010106 Sechium edule HOM05D006653 ORTHO05D008346 4.8e-96 355.1 252 63.9
FAN01G0493 Fragaria x ananassa HOM05D006653 ORTHO05D008346 1.1e-95 354.0 262 63.4
vmacro06946 Vaccinium macrocarpon HOM05D006653 ORTHO05D008346 1.1e-95 354.0 279 60.6
TAR633G2597 Trochodendron aralioides HOM05D006653 ORTHO05D008346 1.8e-95 353.2 228 70.2
Solyc05g052460.3 Solanum lycopersicum HOM05D006653 ORTHO05D008346 3.1e-95 352.4 251 63.3
THA.LOC104810122 Tarenaya hassleriana HOM05D006653 ORTHO05D008346 1.2e-94 350.5 252 61.9
Sabra08G0054400 Salix brachista HOM05D006653 ORTHO05D008346 1.7e-93 346.7 312 54.8
Carub.0004s2256 Capsella rubella HOM05D006653 ORTHO05D008346 2.9e-93 345.9 252 61.5
Duzib114G1011 Durio zibethinus HOM05D006653 ORTHO05D008346 2.9e-93 345.9 252 64.3
CAN.G203.2 Capsicum annuum HOM05D006653 ORTHO05D008346 3.8e-93 345.5 254 62.2
Rhsim03G0147300 Rhododendron simsii HOM05D006653 ORTHO05D008346 5.0e-93 345.1 313 54.0
Aa31LG5G19250 Aethionema arabicum HOM05D006653 ORTHO05D008346 1.5e-92 343.6 252 61.9
SalBow3G2417 Salvia bowleyana HOM05D006653 ORTHO05D008346 1.5e-92 343.6 255 61.2
Thhalv10017062m.g Eutrema salsugineum HOM05D006653 ORTHO05D008346 4.2e-92 342.0 252 60.7
AL4G38130 Arabidopsis lyrata HOM05D006653 ORTHO05D008346 2.1e-91 339.7 252 60.7
Dinv21781 Davidia involucrata HOM05D006653 ORTHO05D008346 2.8e-91 339.3 227 69.2
Sp4g22650 Schrenkiella parvula HOM05D006653 ORTHO05D008346 3.6e-91 339.0 252 59.1
EL10Ac2g04898 Beta vulgaris HOM05D006653 ORTHO05D008346 1.0e-90 337.4 255 62.4
BcaC02g12146 Brassica carinata HOM05D006653 ORTHO05D008346 1.2e-89 334.0 249 58.6
Lsat_1_v5_gn_8_12960 Lactuca sativa HOM05D006653 ORTHO05D008346 1.2e-89 334.0 252 59.1
HanXRQChr17g0560871 Helianthus annuus HOM05D006653 ORTHO05D008346 4.4e-89 332.0 256 59.8
ECA233G2660 Erigeron canadensis HOM05D006653 ORTHO05D008346 7.5e-89 331.3 245 61.2
SalBow3G2982 Salvia bowleyana HOM05D006653 ORTHO05D008346 9.8e-89 330.9 277 56.3
RcHm_v2.0_Chr1g0371041 Rosa chinensis HOM05D006653 ORTHO05D008346 1.3e-88 330.5 262 59.5
C04p07070 Brassica napus HOM05D006653 ORTHO05D008346 2.8e-88 329.3 250 58.4
Sc10g0002660 Simmondsia chinensis HOM05D006653 ORTHO05D008346 3.7e-88 328.9 252 58.7
FAN10G0035 Fragaria x ananassa HOM05D006653 ORTHO05D008346 8.3e-88 327.8 255 61.2
TPR.G27742 Trifolium pratense HOM05D006653 ORTHO05D008346 1.1e-87 327.4 351 47.3
ATR0174G059 Amborella trichopoda HOM05D006653 ORTHO05D008346 1.8e-87 326.6 255 56.1
A05p06130 Brassica napus HOM05D006653 ORTHO05D008346 5.9e-86 321.6 250 57.2
arahy.Tifrunner.gnm1.ann1.CC0JZ8 Arachis hypogaea HOM05D006653 ORTHO05D008346 7.8e-86 321.2 311 49.2
FAN03G1392 Fragaria x ananassa HOM05D006653 ORTHO05D008346 1.3e-85 320.5 262 59.5
ECA232G4592 Erigeron canadensis HOM05D006653 ORTHO05D008346 1.7e-85 320.1 285 51.6
BcaB02g09031 Brassica carinata HOM05D006653 ORTHO05D008346 5.0e-85 318.5 250 56.8
Ah.10g036190 Amaranthus hybridus HOM05D006653 ORTHO05D008346 5.6e-84 315.1 248 56.9
BolC4t22332H Brassica oleracea HOM05D006653 ORTHO05D008346 8.0e-83 311.2 252 56.0
HanXRQChr09g0253161 Helianthus annuus HOM05D006653 ORTHO05D008346 1.8e-82 310.1 255 56.9
Lsat_1_v5_gn_9_60841 Lactuca sativa HOM05D006653 ORTHO05D008346 1.8e-82 310.1 256 56.6
HPP92_000719 Vanilla planifolia HOM05D006653 ORTHO05D008346 4.0e-82 308.9 235 58.7
CANSAT56G3810 Cannabis sativa HOM05D006653 ORTHO05D008346 1.2e-81 307.4 207 68.1
BraA05t19578Z Brassica rapa HOM05D006653 ORTHO05D008346 9.2e-79 297.7 268 51.5
MELO3C034224.2 Cucumis melo HOM05D006653 ORTHO05D008346 3.9e-77 292.4 207 65.2
FvH4_7g25140 Fragaria vesca HOM05D006653 ORTHO05D008346 5.0e-77 292.0 202 65.8
Hund13903 Selenicereus undatus HOM05D006653 ORTHO05D008346 5.6e-76 288.5 221 58.8
ClCG07G004590 Citrullus lanatus HOM05D006653 ORTHO05D008346 2.3e-74 283.1 247 55.9
Gohir.D10G250100 Gossypium hirsutum HOM05D006653 ORTHO05D008346 2.3e-74 283.1 199 64.3
Psat5g130600 Pisum sativum HOM05D006653 ORTHO05D008346 2.3e-74 283.1 202 63.4
arahy.Tifrunner.gnm1.ann1.WF4WBF Arachis hypogaea HOM05D006653 ORTHO05D008346 4.0e-74 282.3 260 52.3
Gohir.A10G238200 Gossypium hirsutum HOM05D006653 ORTHO05D008346 4.0e-74 282.3 199 63.8
CARHR135400 Cardamine hirsuta HOM05D006653 ORTHO05D008346 8.9e-74 281.2 219 58.0
AUR62022948 Chenopodium quinoa HOM05D006653 ORTHO05D008346 2.0e-73 280.0 214 59.8
DCAR_011848 Daucus carota HOM05D006653 ORTHO05D008346 2.6e-73 279.6 203 62.6
VMungo1383G0363 Vigna mungo HOM05D006653 ORTHO05D008346 2.6e-73 279.6 312 47.8
Manes.10G008100 Manihot esculenta HOM05D006653 ORTHO05D008346 4.4e-73 278.9 206 60.7
Atru.chr12.104 Acer truncatum HOM05D006653 ORTHO05D008346 1.2e-70 270.8 193 63.2
PGSC0003DMG400027171 Solanum tuberosum HOM05D006653 ORTHO05D008346 2.7e-70 269.6 250 52.0
PGR142G1681 Punica granatum HOM05D006653 ORTHO05D008346 1.0e-69 267.7 183 66.7
AT2G40316 Arabidopsis thaliana HOM05D006653 ORTHO05D008346 1.7e-69 266.9 210 57.1
Glyma.11G233000 Glycine max HOM05D006653 ORTHO05D008346 3.9e-69 265.8 203 61.6
Lj8C62G17 Lonicera japonica HOM05D006653 ORTHO05D008346 1.9e-63 246.9 188 63.8
MBI03_g37948_MAGBIO Magnolia biondii HOM05D006653 ORTHO05D008346 5.2e-58 228.8 335 38.2
Zm00001eb013720 Zea mays HOM05D006653 ORTHO05D008346 3.8e-56 222.6 188 51.1
Pp3c11_970 Physcomitrium patens HOM05D006653 ORTHO05D008346 2.1e-54 216.9 244 43.0
AUR62012309 Chenopodium quinoa HOM05D000043 ORTHO05D003538 3.0e-53 213.0 226 48.2
Mapoly0095s0003 Marchantia polymorpha HOM05D006653 ORTHO05D008346 4.3e-52 209.1 245 41.6
Pp3c2_28750 Physcomitrium patens HOM05D006653 ORTHO05D008346 4.3e-52 209.1 236 43.2
CDE06G2038 Ceratophyllum demersum HOM05D006653 ORTHO05D008346 8.1e-51 204.9 184 54.3
COL.COLO4_25792 Corchorus olitorius HOM05D006653 ORTHO05D008346 5.6e-44 182.2 155 54.8
Dinv10585 Davidia involucrata HOM05D006653 ORTHO05D008346 1.6e-43 180.6 112 68.8
AagrBONN_evm.TU.Sc2ySwM_362.1315 Anthoceros agrestis HOM05D006653 ORTHO05D008346 4.5e-33 146.0 161 41.0
SMO203G0248 Selaginella moellendorffii HOM05D006653 ORTHO05D008346 4.2e-31 139.4 179 38.5
Cpa.g.sc19.127 Carica papaya HOM05D006653 ORTHO05D008346 1.3e-29 134.4 106 57.5
Manes.07G134901 Manihot esculenta HOM05D006653 ORTHO05D008346 1.9e-28 130.6 147 46.3
HanXRQChr08g0221951 Helianthus annuus HOM05D006653 ORTHO05D008346 7.1e-23 112.1 153 39.9
SHI28813 Sapria himalayana HOM05D006653 ORTHO05D008346 1.6e-22 110.9 227 32.6
Manes.07G074522 Manihot esculenta HOM05D006653 ORTHO05D008346 1.5e-20 104.4 93 51.6
SEGI_38425 Sequoiadendron giganteum HOM05D006653 ORTHO05D008346 1.9e-15 87.4 71 47.9
Manes.04G030750 Manihot esculenta HOM05D006653 ORTHO05D008346 1.2e-09 68.2 55 49.1
CDE04G0201 Ceratophyllum demersum HOM05D002034 ORTHO05D006399 7.7e-09 65.5 73 46.6


User provided reference genes

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