Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.G03073 Eucalyptus grandis HOM05D006950 ORTHO05D008798 2.0e-180 635.6 308 100.0
Eucgr.G03074 Eucalyptus grandis HOM05D006950 ORTHO05D008798 6.6e-147 524.2 308 80.8
GSVIVG01031019001 Vitis vinifera HOM05D006950 ORTHO05D008798 2.0e-140 502.7 307 78.8
PGR142G3639 Punica granatum HOM05D006950 ORTHO05D008798 9.5e-138 493.8 300 78.3
TWI53G1811 Tripterygium wilfordii HOM05D006950 ORTHO05D008798 1.2e-135 486.9 308 76.0
Ciclev10012146m.g Citrus clementina HOM05D006950 ORTHO05D008798 5.8e-135 484.6 308 76.0
MD17G1244700 Malus domestica HOM05D006950 ORTHO05D008798 3.7e-134 481.9 313 74.4
Prupe.3G142000 Prunus persica HOM05D006950 ORTHO05D008798 4.9e-134 481.5 316 73.1
Dinv33949 Davidia involucrata HOM05D006950 ORTHO05D008798 1.1e-133 480.3 309 74.1
Actinidia36323 Actinidia chinensis HOM05D006950 ORTHO05D008798 6.0e-132 474.6 310 73.5
Cpa.g.sc282.6 Carica papaya HOM05D006950 ORTHO05D008798 1.0e-131 473.8 301 74.4
Potri.004G099300 Populus trichocarpa HOM05D006950 ORTHO05D008798 1.3e-131 473.4 313 73.8
Thecc.04G133400 Theobroma cacao HOM05D006950 ORTHO05D008798 1.3e-131 473.4 306 74.5
CiPaw.04G042300 Carya illinoinensis HOM05D006950 ORTHO05D008798 6.6e-131 471.1 311 72.0
vmacro05553 Vaccinium macrocarpon HOM05D006950 ORTHO05D008798 8.6e-131 470.7 313 71.9
Manes.02G068900 Manihot esculenta HOM05D006950 ORTHO05D008798 1.1e-130 470.3 311 72.3
CANSAT78G2296 Cannabis sativa HOM05D006950 ORTHO05D008798 5.6e-130 468.0 313 71.9
TAR629G2916 Trochodendron aralioides HOM05D006950 ORTHO05D008798 7.3e-130 467.6 309 72.8
Haze_14155 Corylus avellana HOM05D006950 ORTHO05D008798 3.6e-129 465.3 308 73.1
Gorai.007G181600 Gossypium raimondii HOM05D006950 ORTHO05D008798 3.6e-129 465.3 304 72.0
Gohir.A11G163600 Gossypium hirsutum HOM05D006950 ORTHO05D008798 8.1e-129 464.2 304 71.7
Atru.chr1.1690 Acer truncatum HOM05D006950 ORTHO05D008798 1.4e-128 463.4 309 72.8
Sed0021084 Sechium edule HOM05D006950 ORTHO05D008798 1.8e-128 463.0 307 72.0
Gohir.D11G169900 Gossypium hirsutum HOM05D006950 ORTHO05D008798 3.1e-128 462.2 304 71.4
Oeu007452.1 Olea europaea HOM05D006950 ORTHO05D008798 8.9e-128 460.7 303 72.3
Hma1.2p1_0136F.1_g062250 Hydrangea macrophylla HOM05D006950 ORTHO05D008798 1.2e-127 460.3 307 71.7
Nitab4.5_0000659g0020 Nicotiana tabacum HOM05D006950 ORTHO05D008798 3.4e-127 458.8 314 70.1
Phvul.008G006100 Phaseolus vulgaris HOM05D006950 ORTHO05D008798 4.4e-127 458.4 304 71.7
Hund13713 Selenicereus undatus HOM05D006950 ORTHO05D008798 4.4e-127 458.4 306 72.5
EL10Ac2g04564 Beta vulgaris HOM05D006950 ORTHO05D008798 7.5e-127 457.6 306 72.2
Medtr7g007310 Medicago truncatula HOM05D006950 ORTHO05D008798 7.5e-127 457.6 306 70.3
MSTRG.15296 Avicennia marina HOM05D006950 ORTHO05D008798 9.9e-127 457.2 307 71.3
Peaxi162Scf00394g00061 Petunia axillaris HOM05D006950 ORTHO05D008798 2.2e-126 456.1 304 70.7
PGSC0003DMG400026406 Solanum tuberosum HOM05D006950 ORTHO05D008798 2.2e-126 456.1 312 69.2
Glyma.18G296400 Glycine max HOM05D006950 ORTHO05D008798 2.9e-126 455.7 301 71.1
Lj1g0016691 Lotus japonicus HOM05D006950 ORTHO05D008798 2.4e-125 452.6 304 71.1
Nitab4.5_0000912g0220 Nicotiana tabacum HOM05D006950 ORTHO05D008798 2.4e-125 452.6 314 69.1
Sopen02g030760 Solanum pennellii HOM05D006950 ORTHO05D008798 2.4e-125 452.6 308 68.8
Lj4A191T50 Lonicera japonica HOM05D006950 ORTHO05D008798 7.1e-125 451.1 310 70.3
arahy.Tifrunner.gnm1.ann1.J0JTFL Arachis hypogaea HOM05D006950 ORTHO05D008798 1.2e-124 450.3 305 68.9
arahy.Tifrunner.gnm1.ann1.QXSY6T Arachis hypogaea HOM05D006950 ORTHO05D008798 1.2e-124 450.3 305 68.9
Nn3g17879 Nelumbo nucifera HOM05D006950 ORTHO05D008798 2.7e-124 449.1 307 68.4
VMungo1383G3190 Vigna mungo HOM05D006950 ORTHO05D008798 2.7e-124 449.1 302 70.5
Lalb_Chr17g0335791 Lupinus albus HOM05D006950 ORTHO05D008798 3.5e-124 448.7 303 70.6
Aqoxy3G00267 Aquilegia oxysepala HOM05D006950 ORTHO05D008798 6.0e-124 448.0 313 66.8
MBI16_g34414_MAGBIO Magnolia biondii HOM05D006950 ORTHO05D008798 3.0e-123 445.7 310 68.1
THA.LOC104805569 Tarenaya hassleriana HOM05D006950 ORTHO05D008798 8.6e-123 444.1 307 69.7
CAN.G625.25 Capsicum annuum HOM05D006950 ORTHO05D008798 1.1e-122 443.7 311 66.9
ClCG03G006740 Citrullus lanatus HOM05D006950 ORTHO05D008798 1.1e-122 443.7 325 67.4
CsaV3_1G032300 Cucumis sativus L. HOM05D006950 ORTHO05D008798 1.9e-122 443.0 298 70.5
TPR.G9714 Trifolium pratense HOM05D006950 ORTHO05D008798 3.3e-122 442.2 309 68.6
Migut.L00319 Erythranthe guttata HOM05D006950 ORTHO05D008798 4.3e-122 441.8 312 69.2
AL7G52300 Arabidopsis lyrata HOM05D006950 ORTHO05D008798 7.3e-122 441.0 301 69.8
Thhalv10027821m.g Eutrema salsugineum HOM05D006950 ORTHO05D008798 2.8e-121 439.1 308 67.2
AL7G52280 Arabidopsis lyrata HOM05D006950 ORTHO05D008798 3.6e-121 438.7 301 70.1
AL7G52430 Arabidopsis lyrata HOM05D006950 ORTHO05D008798 3.6e-121 438.7 301 70.1
BolC6t37017H Brassica oleracea HOM05D006950 ORTHO05D008798 4.7e-121 438.3 304 68.1
A07p19680 Brassica napus HOM05D006950 ORTHO05D008798 8.1e-121 437.6 304 69.1
C06p18110 Brassica napus HOM05D006950 ORTHO05D008798 1.8e-120 436.4 303 68.0
BraA07t29668Z Brassica rapa HOM05D006950 ORTHO05D008798 4.0e-120 435.3 304 68.4
Cc07_g08790 Coffea canephora HOM05D006950 ORTHO05D008798 5.2e-120 434.9 307 68.4
BcaC08g44377 Brassica carinata HOM05D006950 ORTHO05D008798 1.5e-119 433.3 303 67.3
CDE06G1236 Ceratophyllum demersum HOM05D006950 ORTHO05D008798 7.6e-119 431.0 309 65.7
Aa31LG9G17120 Aethionema arabicum HOM05D006950 ORTHO05D008798 1.7e-118 429.9 301 68.4
ECA246G0391 Erigeron canadensis HOM05D006950 ORTHO05D008798 2.2e-118 429.5 302 67.9
unitig_0.g2608 Utricularia gibba HOM05D005540 ORTHO05D006932 2.2e-118 429.5 308 67.2
HanXRQChr15g0471491 Helianthus annuus HOM05D006950 ORTHO05D008798 1.2e-116 423.7 308 66.6
AUR62023300 Chenopodium quinoa HOM05D006950 ORTHO05D008798 6.0e-116 421.4 303 69.0
PSO017G6790 Papaver somniferum HOM05D006950 ORTHO05D008798 6.0e-116 421.4 302 63.9
ATR1125G044 Amborella trichopoda HOM05D006950 ORTHO05D008798 7.3e-114 414.5 305 65.6
Sc11g0008340 Simmondsia chinensis HOM05D006950 ORTHO05D008798 9.6e-114 414.1 316 65.2
Psat3g205440 Pisum sativum HOM05D006950 ORTHO05D008798 1.1e-112 410.6 300 66.0
Lsat_1_v5_gn_3_79740 Lactuca sativa HOM05D006950 ORTHO05D008798 1.4e-112 410.2 313 67.7
Sp7g03690 Schrenkiella parvula HOM05D006950 ORTHO05D008798 4.0e-112 408.7 266 71.8
PSO478G4580 Papaver somniferum HOM05D006950 ORTHO05D008798 9.0e-112 407.5 302 63.9
Carub.0007s3770 Capsella rubella HOM05D006950 ORTHO05D008798 1.7e-110 403.3 284 68.0
BcaB02g08012 Brassica carinata HOM05D006950 ORTHO05D008798 1.6e-108 396.7 279 68.1
Cfa007922 Carpinus fangiana HOM05D006950 ORTHO05D008798 1.9e-106 389.8 336 60.4
Duzib138G1034 Durio zibethinus HOM05D006950 ORTHO05D008798 2.4e-104 382.9 259 71.8
Rhsim10G0067400 Rhododendron simsii HOM05D006950 ORTHO05D008798 8.4e-102 374.4 307 62.2
MELO3C002748.2 Cucumis melo HOM05D006950 ORTHO05D008798 1.6e-100 370.2 252 71.0
COL.COLO4_09336 Corchorus olitorius HOM05D006950 ORTHO05D008798 3.7e-97 359.0 302 59.9
Ca_04046_v3 Cicer arietinum L. HOM05D006950 ORTHO05D008798 7.1e-93 344.7 225 72.4
DCAR_017190 Daucus carota HOM05D006950 ORTHO05D008798 2.1e-89 333.2 312 55.4
Pp3c2_1510 Physcomitrium patens HOM05D006950 ORTHO05D008798 4.8e-89 332.0 295 53.2
CSS0013921 Camellia sinensis var. sinensis HOM05D006950 ORTHO05D008798 5.3e-88 328.6 219 72.6
QL02p051313 Quercus lobata HOM05D006950 ORTHO05D008798 2.6e-87 326.2 215 73.0
SMO232G0122 Selaginella moellendorffii HOM05D006950 ORTHO05D008798 5.8e-87 325.1 294 55.1
CARHR214230 Cardamine hirsuta HOM05D006950 ORTHO05D008798 2.1e-84 316.6 209 70.8
AUR62009002 Chenopodium quinoa HOM05D006950 ORTHO05D008798 3.5e-84 315.8 300 56.7
Mapoly0010s0040 Marchantia polymorpha HOM05D006950 ORTHO05D008798 1.2e-79 300.8 295 48.8
AL686U10010 Arabidopsis lyrata HOM05D006950 ORTHO05D008798 1.0e-78 297.7 301 51.5
AL7G52400 Arabidopsis lyrata HOM05D006950 ORTHO05D008798 5.1e-75 285.4 298 52.3
Sabra04G0080700 Salix brachista HOM05D006950 ORTHO05D008798 3.7e-73 279.3 187 72.2
Nn3g17880 Nelumbo nucifera HOM05D006950 ORTHO05D008798 2.6e-66 256.5 181 66.3
Cre04.g213100 Chlamydomonas reinhardtii HOM05D006950 ORTHO05D008798 1.1e-64 251.1 299 43.1
AT5G38360 Arabidopsis thaliana HOM05D006950 ORTHO05D008798 2.4e-64 250.0 177 67.2
CBR_g51039 Chara braunii HOM05D006950 ORTHO05D008798 2.6e-58 229.9 348 37.1
arahy.Tifrunner.gnm1.ann1.IRCK44 Arachis hypogaea HOM05D006950 ORTHO05D008798 6.3e-57 225.3 170 62.9
MCO15G495 Micromonas commoda HOM05D006950 ORTHO05D008798 1.3e-54 217.6 258 43.0
CDE12G0582 Ceratophyllum demersum HOM05D006950 ORTHO05D008798 3.7e-49 199.5 301 40.2
arahy.Tifrunner.gnm1.ann1.5L16AK Arachis hypogaea HOM05D006950 ORTHO05D008798 1.6e-47 194.1 198 49.5
arahy.Tifrunner.gnm1.ann1.J8JPII Arachis hypogaea HOM05D006950 ORTHO05D008798 7.7e-39 165.2 209 43.1
AagrBONN_evm.TU.Sc2ySwM_362.1440 Anthoceros agrestis HOM05D006950 ORTHO05D008798 1.3e-38 164.5 127 60.6
Glyma.08G365850 Glycine max HOM05D006950 ORTHO05D008798 5.2e-35 152.5 102 70.6
QL02p051310 Quercus lobata HOM05D006950 ORTHO05D008798 1.3e-33 147.9 90 74.4
Ca_04053_v3 Cicer arietinum L. HOM05D006950 ORTHO05D008798 7.0e-32 142.1 89 73.0
AL7G52260 Arabidopsis lyrata HOM05D006950 ORTHO05D008798 3.9e-30 136.3 90 72.2
arahy.Tifrunner.gnm1.ann1.BFZE3W Arachis hypogaea HOM05D006950 ORTHO05D008798 3.3e-29 133.3 91 70.3
PRCOL_00005525 Prasinoderma coloniale HOM05D006950 ORTHO05D008798 1.6e-28 131.0 218 37.6
AagrBONN_evm.TU.Sc2ySwM_368.701 Anthoceros agrestis HOM05D006950 ORTHO05D008798 4.9e-25 119.4 301 28.6
Solyc02g086080.4 Solanum lycopersicum HOM05D006950 ORTHO05D008798 8.3e-25 118.6 101 54.5
Os04g0381400 Oryza sativa ssp. japonica HOM05D006950 ORTHO05D008798 2.0e-23 114.0 94 57.4
CSS0023207 Camellia sinensis var. sinensis HOM05D006950 ORTHO05D008798 1.0e-22 111.7 87 59.8
Haze_01682 Corylus avellana HOM05D006950 ORTHO05D043621 2.4e-08 63.9 30 83.3
Mapoly0069s0018 Marchantia polymorpha HOM05D000224 ORTHO05D001489 1.3e-06 58.2 100 32.0


User provided reference genes

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