Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.G02872 Eucalyptus grandis HOM05D007188 ORTHO05D009102 6.2e-115 417.5 222 100.0
Duzib106G0123 Durio zibethinus HOM05D007188 ORTHO05D009102 1.1e-66 257.3 213 64.3
Nn6g35269 Nelumbo nucifera HOM05D007188 ORTHO05D009102 3.1e-66 255.8 169 72.8
TWI38G2147 Tripterygium wilfordii HOM05D007188 ORTHO05D009102 2.7e-65 252.7 213 63.4
CSS0007320 Camellia sinensis var. sinensis HOM05D007188 ORTHO05D009102 4.5e-65 251.9 167 71.9
CSS0035829 Camellia sinensis var. sinensis HOM05D007188 ORTHO05D009102 5.9e-65 251.5 167 71.3
Gohir.A05G293300 Gossypium hirsutum HOM05D007188 ORTHO05D009102 7.7e-65 251.1 148 78.4
Glyma.20G183500 Glycine max HOM05D007188 ORTHO05D009102 1.3e-64 250.4 152 77.0
GSVIVG01016213001 Vitis vinifera HOM05D007188 ORTHO05D009102 1.3e-64 250.4 164 72.6
Actinidia38870 Actinidia chinensis HOM05D007188 ORTHO05D009102 1.7e-64 250.0 150 76.0
arahy.Tifrunner.gnm1.ann1.3RW2WH Arachis hypogaea HOM05D007188 ORTHO05D009102 3.8e-64 248.8 147 78.9
arahy.Tifrunner.gnm1.ann1.CRM3NE Arachis hypogaea HOM05D007188 ORTHO05D009102 3.8e-64 248.8 147 78.9
Gohir.D05G294000 Gossypium hirsutum HOM05D007188 ORTHO05D009102 3.8e-64 248.8 148 77.7
Phvul.007G099300 Phaseolus vulgaris HOM05D007188 ORTHO05D009102 3.8e-64 248.8 155 74.8
QL08p054189 Quercus lobata HOM05D007188 ORTHO05D009102 3.8e-64 248.8 214 62.1
Gorai.009G310600 Gossypium raimondii HOM05D007188 ORTHO05D009102 5.0e-64 248.4 148 77.0
Sed0000210 Sechium edule HOM05D007188 ORTHO05D009102 5.0e-64 248.4 216 59.3
Cfa001805 Carpinus fangiana HOM05D007188 ORTHO05D009102 6.5e-64 248.1 213 62.0
Cc02_g10880 Coffea canephora HOM05D007188 ORTHO05D009102 1.5e-63 246.9 171 71.9
TAR623G0008 Trochodendron aralioides HOM05D007188 ORTHO05D009102 1.9e-63 246.5 168 68.5
CsaV3_5G036040 Cucumis sativus L. HOM05D007188 ORTHO05D009102 2.5e-63 246.1 216 61.1
Manes.07G133140 Manihot esculenta HOM05D007188 ORTHO05D009102 2.5e-63 246.1 163 70.6
CiPaw.02G171800 Carya illinoinensis HOM05D007188 ORTHO05D009102 3.2e-63 245.7 166 71.7
ClCG05G021230 Citrullus lanatus HOM05D007188 ORTHO05D009102 3.2e-63 245.7 222 58.6
VMungo0720G2339 Vigna mungo HOM05D007188 ORTHO05D009102 4.2e-63 245.4 210 62.4
MD01G1102700 Malus domestica HOM05D007188 ORTHO05D009102 5.5e-63 245.0 215 59.5
SalBow4G2327 Salvia bowleyana HOM05D007188 ORTHO05D009102 7.2e-63 244.6 158 70.9
RhsimUnG0185400 Rhododendron simsii HOM05D007188 ORTHO05D009102 2.7e-62 242.7 142 78.9
MELO3C012404.2 Cucumis melo HOM05D007188 ORTHO05D009102 3.6e-62 242.3 215 57.7
Rhsim09G0148000 Rhododendron simsii HOM05D007188 ORTHO05D009102 8.0e-62 241.1 142 78.9
RcHm_v2.0_Chr1g0362491 Rosa chinensis HOM05D007188 ORTHO05D009102 8.0e-62 241.1 221 59.3
Sc06g0002050 Simmondsia chinensis HOM05D007188 ORTHO05D009102 1.4e-61 240.4 143 78.3
Sopen05g034000 Solanum pennellii HOM05D007188 ORTHO05D009102 1.8e-61 240.0 158 72.2
Aqoxy1G01136 Aquilegia oxysepala HOM05D007188 ORTHO05D009102 3.0e-61 239.2 150 74.7
CANSAT56G0643 Cannabis sativa HOM05D007188 ORTHO05D009102 4.0e-61 238.8 215 59.5
Sabra08G0023300 Salix brachista HOM05D007188 ORTHO05D009102 4.0e-61 238.8 211 62.6
Potri.008G034900 Populus trichocarpa HOM05D007188 ORTHO05D009102 5.2e-61 238.4 211 61.1
Solyc05g055550.3 Solanum lycopersicum HOM05D007188 ORTHO05D009102 5.2e-61 238.4 158 71.5
Lj5g0026151 Lotus japonicus HOM05D007188 ORTHO05D009102 6.8e-61 238.0 159 71.7
Lalb_Chr21g0313651 Lupinus albus HOM05D007188 ORTHO05D009102 6.8e-61 238.0 146 76.0
Ah.06g188920 Amaranthus hybridus HOM05D006516 ORTHO05D008083 8.8e-61 237.7 211 59.2
PGSC0003DMG400023370 Solanum tuberosum HOM05D007188 ORTHO05D009102 2.0e-60 236.5 165 68.5
C03p44120 Brassica napus HOM05D007188 ORTHO05D009102 2.6e-60 236.1 174 64.9
TPR.G10293 Trifolium pratense HOM05D007188 ORTHO05D009102 2.6e-60 236.1 150 72.0
CAN.G694.38 Capsicum annuum HOM05D007188 ORTHO05D009102 3.4e-60 235.7 165 69.1
Medtr1g094160 Medicago truncatula HOM05D007188 ORTHO05D009102 4.4e-60 235.3 186 61.8
AL3G21760 Arabidopsis lyrata HOM05D007188 ORTHO05D009102 5.7e-60 235.0 172 66.3
Migut.F01952 Erythranthe guttata HOM05D007188 ORTHO05D009102 5.7e-60 235.0 177 65.5
Atru.chr12.855 Acer truncatum HOM05D007188 ORTHO05D009102 7.5e-60 234.6 152 72.4
Solyc02g033060.3 Solanum lycopersicum HOM05D007188 ORTHO05D009102 9.8e-60 234.2 158 70.9
AT3G10405 Arabidopsis thaliana HOM05D007188 ORTHO05D009102 1.3e-59 233.8 158 69.6
AUR62014280 Chenopodium quinoa HOM05D007188 ORTHO05D009102 1.3e-59 233.8 150 76.0
FAN01G3175 Fragaria x ananassa HOM05D007188 ORTHO05D009102 1.3e-59 233.8 216 59.7
Aa31LG3G3010 Aethionema arabicum HOM05D007188 ORTHO05D009102 1.7e-59 233.4 153 71.2
SGA_v2.0_scaffold62G21381 Striga asiatica HOM05D007188 ORTHO05D009102 1.7e-59 233.4 198 61.1
FAN06G0953 Fragaria x ananassa HOM05D007188 ORTHO05D009102 2.2e-59 233.0 210 60.5
FAN06G2123 Fragaria x ananassa HOM05D007188 ORTHO05D009102 2.2e-59 233.0 210 60.5
FAN10G2630 Fragaria x ananassa HOM05D007188 ORTHO05D009102 4.9e-59 231.9 210 60.0
CARHR084890 Cardamine hirsuta HOM05D007188 ORTHO05D009102 6.3e-59 231.5 148 71.6
BolC3t16687H Brassica oleracea HOM05D007188 ORTHO05D009102 8.3e-59 231.1 150 71.3
Thhalv10021497m.g Eutrema salsugineum HOM05D007188 ORTHO05D009102 1.1e-58 230.7 148 73.0
BraA03t12819Z Brassica rapa HOM05D007188 ORTHO05D009102 1.8e-58 229.9 150 70.0
Carub.0003s0959 Capsella rubella HOM05D007188 ORTHO05D009102 1.8e-58 229.9 148 72.3
A03p36520 Brassica napus HOM05D007188 ORTHO05D009102 3.1e-58 229.2 206 56.8
Ca_10538_v3 Cicer arietinum L. HOM05D007188 ORTHO05D009102 4.1e-58 228.8 148 71.6
HanXRQChr08g0218401 Helianthus annuus HOM05D007188 ORTHO05D009102 5.4e-58 228.4 163 66.3
CDE09G0470 Ceratophyllum demersum HOM05D007188 ORTHO05D009102 7.0e-58 228.0 148 67.6
Sp3g08680 Schrenkiella parvula HOM05D007188 ORTHO05D009102 7.0e-58 228.0 146 72.6
FAN03G0393 Fragaria x ananassa HOM05D007188 ORTHO05D009102 9.2e-58 227.6 210 59.5
Lsat_1_v5_gn_8_20860 Lactuca sativa HOM05D007188 ORTHO05D009102 4.5e-57 225.3 148 68.9
Nitab4.5_0001760g0020 Nicotiana tabacum HOM05D007188 ORTHO05D009102 1.3e-56 223.8 158 68.4
PSO063G4012 Papaver somniferum HOM05D007188 ORTHO05D009102 1.3e-56 223.8 150 68.7
Glyma.10G207400 Glycine max HOM05D007188 ORTHO05D009102 1.7e-56 223.4 152 69.7
Psat6g181120 Pisum sativum HOM05D007188 ORTHO05D009102 5.0e-56 221.9 152 66.4
Os10g0545100 Oryza sativa ssp. japonica HOM05D007188 ORTHO05D009102 1.9e-55 219.9 147 67.3
THA.LOC104826897 Tarenaya hassleriana HOM05D007188 ORTHO05D009102 1.9e-55 219.9 173 64.2
ECA233G0714 Erigeron canadensis HOM05D007188 ORTHO05D009102 2.5e-55 219.5 169 60.9
unitig_88.g27814 Utricularia gibba HOM05D007188 ORTHO05D009102 2.5e-55 219.5 153 66.7
Peaxi162Scf00176g01519 Petunia axillaris HOM05D007188 ORTHO05D009102 5.6e-55 218.4 209 58.9
Zm00001eb022660 Zea mays HOM05D007188 ORTHO05D009102 4.0e-53 212.2 145 68.3
Thecc.10G085100 Theobroma cacao HOM05D007188 ORTHO05D009102 8.3e-51 204.5 177 58.8
Sopen02g011440 Solanum pennellii HOM05D007188 ORTHO05D009102 7.0e-50 201.4 125 73.6
Dinv31237 Davidia involucrata HOM05D007188 ORTHO05D009102 9.2e-50 201.1 136 67.6
BcaC01g04184 Brassica carinata HOM05D007188 ORTHO05D009102 2.7e-49 199.5 150 64.7
COL.COLO4_36178 Corchorus olitorius HOM05D007188 ORTHO05D009102 2.3e-48 196.4 221 48.4
Haze_16743 Corylus avellana HOM05D007188 ORTHO05D009102 1.1e-47 194.1 213 54.5
EL10Ac4g08743 Beta vulgaris HOM05D007188 ORTHO05D009102 1.9e-47 193.4 170 58.8
vmacro04839 Vaccinium macrocarpon HOM05D007188 ORTHO05D009102 8.0e-46 188.0 143 65.0
Prupe.2G208300 Prunus persica HOM05D007188 ORTHO05D009102 2.3e-45 186.4 176 56.8
Pp3c2_18450 Physcomitrium patens HOM05D007188 ORTHO05D009102 1.1e-42 177.6 147 54.4
Mapoly0050s0048 Marchantia polymorpha HOM05D007188 ORTHO05D009102 3.2e-42 176.0 147 53.1
Mapoly0278s0008 Marchantia polymorpha HOM05D007188 ORTHO05D009102 3.2e-42 176.0 147 53.1
Hund14950 Selenicereus undatus HOM05D007188 ORTHO05D009102 3.0e-40 169.5 116 66.4
Nitab4.5_0000096g0330 Nicotiana tabacum HOM05D007188 ORTHO05D009102 6.6e-40 168.3 135 62.2
AagrBONN_evm.TU.Sc2ySwM_228.639 Anthoceros agrestis HOM05D007188 ORTHO05D009102 2.7e-33 146.4 147 48.3
Ciclev10033195m.g Citrus clementina HOM05D007188 ORTHO05D009102 3.0e-32 142.9 83 77.1
SMO358G0267 Selaginella moellendorffii HOM05D007188 ORTHO05D009102 8.1e-30 134.8 155 42.6
FvH4_7g18710 Fragaria vesca HOM05D007188 ORTHO05D009102 3.4e-28 129.4 148 51.4
CBR_g28804 Chara braunii HOM05D007188 ORTHO05D009102 1.0e-24 117.9 189 36.5
PSO339G6470 Papaver somniferum HOM05D007188 ORTHO05D009102 1.0e-24 117.9 113 51.3
SEGI_08985 Sequoiadendron giganteum HOM05D007188 ORTHO05D009102 5.6e-23 112.1 99 60.6
MCO11G330 Micromonas commoda HOM05D007188 ORTHO05D009102 7.6e-20 101.7 184 32.1
FAN10G3168 Fragaria x ananassa HOM05D007188 ORTHO05D009102 7.8e-17 91.7 121 50.4
Rhsim09G0147800 Rhododendron simsii HOM05D007188 ORTHO05D009102 1.0e-16 91.3 174 36.8
PRCOL_00002171 Prasinoderma coloniale HOM05D007188 ORTHO05D009102 6.6e-16 88.6 153 34.6
Cre10.g464650 Chlamydomonas reinhardtii HOM05D007188 ORTHO05D009102 6.2e-14 82.0 122 34.4
RhsimUnG0185100 Rhododendron simsii HOM05D007188 ORTHO05D009102 1.8e-13 80.5 180 32.8
AUR62034156 Chenopodium quinoa HOM05D007188 ORTHO05D009102 3.2e-10 69.7 47 74.5
Oeu034116.1 Olea europaea HOM05D007188 ORTHO05D009102 1.6e-09 67.4 44 75.0
HPP92_025583 Vanilla planifolia HOM05D006951 ORTHO05D008594 6.0e-09 65.5 44 70.5
HPP92_025582 Vanilla planifolia HOM05D006951 ORTHO05D008594 7.9e-09 65.1 49 53.1
vmacro04837 Vaccinium macrocarpon HOM05D000026 ORTHO05D000094 2.3e-08 63.5 40 75.0
VMungo1080G0524 Vigna mungo HOM05D007188 ORTHO05D008722 2.5e-07 60.1 32 84.4
CDE02G0641 Ceratophyllum demersum HOM05D000146 ORTHO05D002110 9.6e-07 58.2 43 62.8
MCO13G501 Micromonas commoda HOM05D058099 ORTHO05D044315 3.6e-06 56.2 124 27.4


User provided reference genes

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