Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.G02856 Eucalyptus grandis HOM05D005893 ORTHO05D007295 2.2e-100 369.0 190 100.0
PGR142G3224 Punica granatum HOM05D005893 ORTHO05D007295 7.8e-58 227.6 189 65.1
Thecc.10G078600 Theobroma cacao HOM05D005893 ORTHO05D002604 5.1e-57 224.9 180 65.6
CiPaw.01G270700 Carya illinoinensis HOM05D005893 ORTHO05D007295 2.5e-56 222.6 193 61.7
QL08p055159 Quercus lobata HOM05D005893 ORTHO05D007295 1.3e-55 220.3 197 60.4
Dinv31297 Davidia involucrata HOM05D005893 ORTHO05D007295 4.8e-55 218.4 192 60.9
Duzib106G0129 Durio zibethinus HOM05D005893 ORTHO05D007295 6.2e-55 218.0 180 65.0
Actinidia06754 Actinidia chinensis HOM05D005893 ORTHO05D007295 1.1e-54 217.2 188 61.7
Gohir.A05G295100 Gossypium hirsutum HOM05D005893 ORTHO05D007295 5.3e-54 214.9 180 63.9
Cfa001666 Carpinus fangiana HOM05D005893 ORTHO05D007295 4.4e-53 211.8 192 59.4
Ciclev10030991m.g Citrus clementina HOM05D003292 ORTHO05D004237 7.6e-53 211.1 158 68.4
Cpa.g.sc53.97 Carica papaya HOM05D005893 ORTHO05D007295 1.3e-52 210.3 185 59.5
Potri.008G037300 Populus trichocarpa HOM05D005893 ORTHO05D007295 1.3e-52 210.3 195 59.5
Manes.07G096800 Manihot esculenta HOM05D005893 ORTHO05D007295 1.7e-52 209.9 195 56.9
Atru.chr12.817 Acer truncatum HOM05D005893 ORTHO05D007295 2.2e-52 209.5 180 61.7
Gorai.009G312400 Gossypium raimondii HOM05D005893 ORTHO05D007295 2.9e-52 209.1 180 62.8
TAR633G2388 Trochodendron aralioides HOM05D005893 ORTHO05D007295 4.9e-52 208.4 196 57.7
COL.COLO4_38473 Corchorus olitorius HOM05D005893 ORTHO05D007295 1.1e-51 207.2 181 64.1
TWI15G0972 Tripterygium wilfordii HOM05D005893 ORTHO05D007295 1.1e-51 207.2 190 56.8
Nn2g11535 Nelumbo nucifera HOM05D005893 ORTHO05D007295 1.4e-51 206.8 189 57.7
Gohir.D05G295800 Gossypium hirsutum HOM05D005893 ORTHO05D007295 1.9e-51 206.5 180 61.7
Sabra08G0025100 Salix brachista HOM05D005893 ORTHO05D007295 3.2e-51 205.7 195 57.9
Ca_10554_v3 Cicer arietinum L. HOM05D005893 ORTHO05D007295 4.2e-51 205.3 199 56.8
Glyma.10G209400 Glycine max HOM05D005893 ORTHO05D007295 4.2e-51 205.3 190 58.9
Lj2C17T1 Lonicera japonica HOM05D005893 ORTHO05D007295 4.2e-51 205.3 168 63.7
Haze_16866 Corylus avellana HOM05D005893 ORTHO05D007295 1.6e-50 203.4 170 61.8
Phvul.007G096700 Phaseolus vulgaris HOM05D005893 ORTHO05D007295 2.1e-50 203.0 192 56.2
Glyma.20G181200 Glycine max HOM05D005893 ORTHO05D007295 2.7e-50 202.6 190 56.8
Dinv31211 Davidia involucrata HOM05D005893 ORTHO05D007295 3.5e-50 202.2 169 62.7
Hund09872 Selenicereus undatus HOM05D005893 ORTHO05D007295 7.9e-50 201.1 190 58.9
DCAR_019095 Daucus carota HOM05D005893 ORTHO05D007295 1.7e-49 199.9 186 56.5
Migut.F01727 Erythranthe guttata HOM05D005893 ORTHO05D007295 1.7e-49 199.9 182 58.8
Psat6g182280 Pisum sativum HOM05D005893 ORTHO05D007295 6.6e-49 198.0 160 61.9
Sed0005810 Sechium edule HOM05D005893 ORTHO05D007295 1.5e-48 196.8 184 59.8
CSS0031267 Camellia sinensis var. sinensis HOM05D005182 ORTHO05D006631 7.3e-48 194.5 172 58.7
SalBow6G7151 Salvia bowleyana HOM05D005893 ORTHO05D007295 7.3e-48 194.5 189 54.0
TPR.G1908 Trifolium pratense HOM05D005893 ORTHO05D007295 1.3e-47 193.7 189 56.6
CANSAT56G0338 Cannabis sativa HOM05D005893 ORTHO05D007295 1.6e-47 193.4 154 64.9
MELO3C012415.2 Cucumis melo HOM05D005893 ORTHO05D007295 1.6e-47 193.4 183 57.9
MSTRG.382 Avicennia marina HOM05D005893 ORTHO05D007295 3.6e-47 192.2 187 54.5
ClCG05G021120 Citrullus lanatus HOM05D005893 ORTHO05D007295 8.1e-47 191.0 167 61.7
CsaV3_5G036140 Cucumis sativus L. HOM05D005893 ORTHO05D007295 1.1e-46 190.7 183 57.4
Sc20g0001660 Simmondsia chinensis HOM05D005893 ORTHO05D007295 1.1e-46 190.7 185 55.1
GSVIVG01016242001 Vitis vinifera HOM05D003292 ORTHO05D004237 5.3e-46 188.3 172 60.5
Hma1.2p1_1458F.1_g284765 Hydrangea macrophylla HOM05D005893 ORTHO05D007295 9.0e-46 187.6 158 64.6
MD07G1171800 Malus domestica HOM05D005893 ORTHO05D007295 1.2e-45 187.2 191 55.5
Sed0025931 Sechium edule HOM05D005893 ORTHO05D007295 1.2e-45 187.2 186 57.0
VMungo0720G1965 Vigna mungo HOM05D005893 ORTHO05D007295 2.6e-45 186.0 153 61.4
EL10Ac6g14183 Beta vulgaris HOM05D005893 ORTHO05D007295 3.4e-45 185.7 157 60.5
Lj5g0004254 Lotus japonicus HOM05D005893 ORTHO05D007295 4.5e-45 185.3 191 52.4
Lj5g0008044 Lotus japonicus HOM05D005893 ORTHO05D007295 4.5e-45 185.3 191 52.4
Lj5g0026776 Lotus japonicus HOM05D005893 ORTHO05D007295 4.5e-45 185.3 191 52.4
MBI05_g31459_MAGBIO Magnolia biondii HOM05D005893 ORTHO05D007295 5.8e-45 184.9 169 58.0
Lalb_Chr02g0152261 Lupinus albus HOM05D005893 ORTHO05D007295 9.9e-45 184.1 187 54.5
EL10Ac6g14385 Beta vulgaris HOM05D005893 ORTHO05D007295 1.3e-44 183.7 157 59.9
Cc02_g11140 Coffea canephora HOM05D005893 ORTHO05D007295 8.4e-44 181.0 186 52.7
SGA_v2.0_scaffold2G01368 Striga asiatica HOM05D005893 ORTHO05D007295 1.1e-43 180.6 194 53.1
MD01G1105600 Malus domestica HOM05D005893 ORTHO05D007295 1.4e-43 180.3 187 55.1
Oeu021200.1 Olea europaea HOM05D005893 ORTHO05D007295 1.4e-43 180.3 106 78.3
HPP92_025345 Vanilla planifolia HOM05D005893 ORTHO05D007295 2.4e-43 179.5 183 54.1
SalBow7G0798 Salvia bowleyana HOM05D005893 ORTHO05D007295 2.1e-42 176.4 161 55.9
Cfa014465 Carpinus fangiana HOM05D005893 ORTHO05D007295 2.7e-42 176.0 102 80.4
PSO339G3974 Papaver somniferum HOM05D005893 ORTHO05D007295 6.0e-42 174.9 177 53.7
Medtr1g094720 Medicago truncatula HOM05D005893 ORTHO05D007295 1.8e-41 173.3 189 50.8
Ah.01g004770 Amaranthus hybridus HOM05D005893 ORTHO05D007295 3.9e-41 172.2 168 53.0
CARHR164770 Cardamine hirsuta HOM05D005893 ORTHO05D007295 3.9e-41 172.2 188 55.9
ATR0680G313 Amborella trichopoda HOM05D005893 ORTHO05D007295 8.7e-41 171.0 131 62.6
Os02g0819700 Oryza sativa ssp. japonica HOM05D005893 ORTHO05D007295 8.7e-41 171.0 141 63.1
RcHm_v2.0_Chr1g0362931 Rosa chinensis HOM05D005893 ORTHO05D007295 1.1e-40 170.6 194 51.0
Aqoxy1G01187 Aquilegia oxysepala HOM05D005893 ORTHO05D007295 1.5e-40 170.2 130 64.6
THA.LOC104825224 Tarenaya hassleriana HOM05D005893 ORTHO05D007295 1.9e-40 169.9 150 56.0
Nitab4.5_0007148g0010 Nicotiana tabacum HOM05D005893 ORTHO05D007295 7.4e-40 167.9 183 50.8
Lsat_1_v5_gn_8_20480 Lactuca sativa HOM05D005893 ORTHO05D007295 9.6e-40 167.5 183 51.9
Nitab4.5_0002194g0010 Nicotiana tabacum HOM05D005893 ORTHO05D007295 1.3e-39 167.2 186 50.0
Zm00001eb259110 Zea mays HOM05D005893 ORTHO05D007295 1.6e-39 166.8 188 51.1
unitig_46.g18354 Utricularia gibba HOM05D005893 ORTHO05D007295 8.1e-39 164.5 179 49.7
AT3G54826 Arabidopsis thaliana HOM05D005893 ORTHO05D007295 1.1e-38 164.1 183 54.1
Carub.0005s2142 Capsella rubella HOM05D005893 ORTHO05D007295 1.1e-38 164.1 182 51.1
Sopen05g031760 Solanum pennellii HOM05D005893 ORTHO05D007295 1.1e-38 164.1 192 52.1
PGSC0003DMG400027152 Solanum tuberosum HOM05D005893 ORTHO05D007295 1.4e-38 163.7 196 49.5
CAN.G305.42 Capsicum annuum HOM05D005893 ORTHO05D007295 5.3e-38 161.8 138 56.5
AUR62014260 Chenopodium quinoa HOM05D005893 ORTHO05D007295 5.3e-38 161.8 165 52.7
Peaxi162Scf00431g00001 Petunia axillaris HOM05D005893 ORTHO05D007295 5.3e-38 161.8 157 54.1
AL5G35910 Arabidopsis lyrata HOM05D005893 ORTHO05D007295 9.0e-38 161.0 183 50.8
Thhalv10010741m.g Eutrema salsugineum HOM05D005893 ORTHO05D007295 1.2e-37 160.6 182 51.6
HanXRQChr08g0218681 Helianthus annuus HOM05D005893 ORTHO05D007295 2.6e-37 159.5 185 50.8
SEGI_03670 Sequoiadendron giganteum HOM05D005893 ORTHO05D007295 4.5e-37 158.7 125 63.2
unitig_37.g12607 Utricularia gibba HOM05D000329 ORTHO05D002132 5.8e-37 158.3 184 50.5
ECA233G2346 Erigeron canadensis HOM05D005893 ORTHO05D007295 1.0e-36 157.5 179 50.8
BcaC08g44701 Brassica carinata HOM05D005893 ORTHO05D007295 2.9e-36 156.0 100 74.0
BcaB02g07716 Brassica carinata HOM05D005893 ORTHO05D007295 4.9e-36 155.2 100 73.0
AUR62038482 Chenopodium quinoa HOM05D005893 ORTHO05D007295 6.5e-36 154.8 115 65.2
BraA07t29907Z Brassica rapa HOM05D005893 ORTHO05D007295 8.4e-36 154.5 94 75.5
vmacro07131 Vaccinium macrocarpon HOM05D000972 ORTHO05D001783 1.1e-35 154.1 167 53.3
Aa31sc66G40 Aethionema arabicum HOM05D005893 ORTHO05D007295 2.5e-35 152.9 163 51.5
A07p22290 Brassica napus HOM05D005893 ORTHO05D007295 3.2e-35 152.5 180 48.9
Hma1.2p1_1458F.1_g284770 Hydrangea macrophylla HOM05D005893 ORTHO05D007295 3.2e-35 152.5 84 84.5
Sp5g07600 Schrenkiella parvula HOM05D005893 ORTHO05D007295 5.5e-35 151.8 184 50.5
C06p22370 Brassica napus HOM05D005893 ORTHO05D007295 9.3e-35 151.0 180 48.9
FvH4_7g19000 Fragaria vesca HOM05D005893 ORTHO05D007295 9.3e-35 151.0 235 40.4
C08p29970 Brassica napus HOM05D005893 ORTHO05D007295 1.2e-34 150.6 188 48.9
FAN06G1961 Fragaria x ananassa HOM05D005893 ORTHO05D007295 1.2e-34 150.6 235 40.0
A09p47740 Brassica napus HOM05D005893 ORTHO05D007295 2.7e-34 149.4 188 48.4
BolC8t50606H Brassica oleracea HOM05D005893 ORTHO05D007295 3.5e-34 149.1 188 48.4
FAN06G4511 Fragaria x ananassa HOM05D005893 ORTHO05D007295 3.5e-34 149.1 235 40.0
BraA09t40232Z Brassica rapa HOM05D005893 ORTHO05D007295 4.6e-34 148.7 188 48.4
FAN03G3224 Fragaria x ananassa HOM05D005893 ORTHO05D007295 6.0e-34 148.3 235 40.4
BcaB01g00158 Brassica carinata HOM05D005893 ORTHO05D007295 7.9e-34 147.9 147 53.1
BcaC07g39781 Brassica carinata HOM05D005893 ORTHO05D007295 7.9e-34 147.9 186 47.8
FAN01G0197 Fragaria x ananassa HOM05D005893 ORTHO05D007295 3.9e-33 145.6 99 67.7
FAN10G0987 Fragaria x ananassa HOM05D005893 ORTHO05D007295 8.7e-33 144.4 235 39.6
CBR_g38445 Chara braunii HOM05D005893 ORTHO05D007295 1.3e-31 140.6 95 67.4
Solyc05g053250.4 Solanum lycopersicum HOM05D005893 ORTHO05D007295 1.3e-31 140.6 175 50.3
CDE01G0774 Ceratophyllum demersum HOM05D005893 ORTHO05D007295 1.4e-30 137.1 77 76.6
Mapoly0143s0034 Marchantia polymorpha HOM05D005893 ORTHO05D007295 7.6e-29 131.3 126 54.8
AagrBONN_evm.TU.Sc2ySwM_228.2692 Anthoceros agrestis HOM05D005893 ORTHO05D007295 1.9e-27 126.7 91 60.4
Pp3c10_20870 Physcomitrium patens HOM05D005893 ORTHO05D007295 2.5e-27 126.3 89 62.9
SGA_v2.0_scaffold223G42811 Striga asiatica HOM05D005893 ORTHO05D007295 6.7e-25 118.2 192 39.6
FAN06G0522 Fragaria x ananassa HOM05D003292 ORTHO05D004237 1.9e-24 116.7 89 61.8
MBI05_g14981_MAGBIO Magnolia biondii HOM05D005893 ORTHO05D007295 1.9e-24 116.7 105 57.1
MBI05_g31456_MAGBIO Magnolia biondii HOM05D005893 ORTHO05D007295 5.7e-24 115.2 96 59.4
SGA_v2.0_scaffold51G18702 Striga asiatica HOM05D005893 ORTHO05D007295 4.1e-22 109.0 168 40.5
SMO364G0951 Selaginella moellendorffii HOM05D005893 ORTHO05D007295 9.0e-22 107.8 72 65.3
MCO14G392 Micromonas commoda HOM05D005893 ORTHO05D007295 2.7e-18 96.3 151 39.1
MBI05_g14980_MAGBIO Magnolia biondii HOM05D005893 ORTHO05D007295 1.0e-17 94.4 109 47.7
SGA_v2.0_scaffold211G42109 Striga asiatica HOM05D005893 ORTHO05D007295 1.0e-17 94.4 120 41.7
MBI08_g29407_MAGBIO Magnolia biondii HOM05D002127 ORTHO05D007295 1.8e-17 93.6 124 44.4
MBI19_g05599_MAGBIO Magnolia biondii HOM05D005893 ORTHO05D007295 4.8e-15 85.5 69 62.3
MBI04_g06289_MAGBIO Magnolia biondii HOM05D005893 ORTHO05D007295 2.6e-13 79.7 125 41.6
Cre07.g334851 Chlamydomonas reinhardtii HOM05D005893 ORTHO05D007295 1.3e-12 77.4 72 48.6
Peaxi162Scf00066g01616 Petunia axillaris HOM05D005893 ORTHO05D007295 6.5e-12 75.1 125 39.2
PRCOL_00001193 Prasinoderma coloniale HOM05D001599 ORTHO05D003184 4.7e-10 68.9 72 45.8
Cfa025074 Carpinus fangiana HOM05D005893 ORTHO05D007295 6.1e-10 68.6 70 42.9
Mapoly0032s0026 Marchantia polymorpha HOM05D005893 ORTHO05D007295 1.4e-09 67.4 79 39.2
Rhsim05G0120600 Rhododendron simsii HOM05D005893 ORTHO05D007295 2.3e-09 66.6 40 77.5
MBI05_g31458_MAGBIO Magnolia biondii HOM05D005893 ORTHO05D007295 3.9e-09 65.9 142 37.3
SGA_v2.0_scaffold134G34742 Striga asiatica HOM05D005893 ORTHO05D007295 2.0e-08 63.5 118 37.3


User provided reference genes

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