Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.G02812 Eucalyptus grandis HOM05D005934 ORTHO05D005165 2.0e-223 778.9 424 100.0
Duzib114G0889 Durio zibethinus HOM05D005934 ORTHO05D005165 1.4e-136 490.3 438 67.8
QL08p056591 Quercus lobata HOM05D005934 ORTHO05D005165 3.0e-134 482.6 478 62.3
RcHm_v2.0_Chr1g0363881 Rosa chinensis HOM05D005934 ORTHO05D005165 8.8e-134 481.1 465 62.6
MD01G1111100 Malus domestica HOM05D005934 ORTHO05D005165 1.5e-133 480.3 463 63.3
Phvul.007G092600 Phaseolus vulgaris HOM05D005934 ORTHO05D005165 2.0e-133 479.9 427 66.5
Prupe.2G216000 Prunus persica HOM05D005934 ORTHO05D005165 2.0e-133 479.9 439 65.4
PGR142G2623 Punica granatum HOM05D005934 ORTHO05D005165 2.6e-133 479.6 456 65.4
arahy.Tifrunner.gnm1.ann1.H195MC Arachis hypogaea HOM05D005934 ORTHO05D005165 1.1e-131 474.2 434 64.7
FvH4_7g19882 Fragaria vesca HOM05D005934 ORTHO05D005165 1.4e-131 473.8 463 62.9
TPR.G1756 Trifolium pratense HOM05D005934 ORTHO05D005165 1.4e-131 473.8 432 66.0
FAN03G0840 Fragaria x ananassa HOM05D005934 ORTHO05D005165 4.1e-131 472.2 463 62.0
Gohir.A05G345500 Gossypium hirsutum HOM05D005934 ORTHO05D005165 5.3e-131 471.9 423 66.2
Atru.chr12.720 Acer truncatum HOM05D005934 ORTHO05D005165 9.1e-131 471.1 459 63.6
Gorai.009G314800 Gossypium raimondii HOM05D005934 ORTHO05D005165 2.6e-130 469.5 435 65.5
Medtr1g095640 Medicago truncatula HOM05D005934 ORTHO05D005165 2.6e-130 469.5 433 65.4
FAN10G0472 Fragaria x ananassa HOM05D005934 ORTHO05D005165 3.4e-130 469.2 459 63.8
CANSAT56G0550 Cannabis sativa HOM05D005934 ORTHO05D005165 1.0e-129 467.6 453 63.8
Gohir.D05G297500 Gossypium hirsutum HOM05D005934 ORTHO05D005165 2.2e-129 466.5 435 65.1
Gohir.A05G297600 Gossypium hirsutum HOM05D005934 ORTHO05D005165 2.9e-129 466.1 435 65.3
FAN01G1479 Fragaria x ananassa HOM05D005934 ORTHO05D005165 3.8e-129 465.7 433 64.9
TWI38G0616 Tripterygium wilfordii HOM05D005934 ORTHO05D005165 3.2e-128 462.6 458 63.3
FAN01G0846 Fragaria x ananassa HOM05D005934 ORTHO05D005165 4.2e-128 462.2 462 61.9
Gohir.D04G084700 Gossypium hirsutum HOM05D005934 ORTHO05D005165 5.5e-128 461.8 423 65.0
arahy.Tifrunner.gnm1.ann1.W2M3W6 Arachis hypogaea HOM05D005934 ORTHO05D005165 2.7e-127 459.5 435 63.7
Lj5g0021458 Lotus japonicus HOM05D005934 ORTHO05D005165 1.8e-126 456.8 444 63.7
Haze_16922 Corylus avellana HOM05D005934 ORTHO05D005165 1.5e-125 453.8 448 62.3
Ca_10584_v3 Cicer arietinum L. HOM05D005934 ORTHO05D005165 3.3e-125 452.6 431 64.0
Glyma.20G178100 Glycine max HOM05D005934 ORTHO05D005165 1.3e-124 450.7 439 62.4
VMungo0720G0064 Vigna mungo HOM05D005934 ORTHO05D005165 3.7e-124 449.1 403 65.8
CSS0026746 Camellia sinensis var. sinensis HOM05D005934 ORTHO05D005165 1.8e-123 446.8 434 63.1
Ciclev10031457m.g Citrus clementina HOM05D005934 ORTHO05D005165 1.2e-122 444.1 460 59.6
Nitab4.5_0008994g0010 Nicotiana tabacum HOM05D005934 ORTHO05D005165 3.8e-121 439.1 426 62.7
MD07G1177300 Malus domestica HOM05D005934 ORTHO05D005165 1.9e-120 436.8 463 59.2
Thecc.10G070000 Theobroma cacao HOM05D005934 ORTHO05D005165 1.0e-118 431.0 437 62.2
Manes.10G044200 Manihot esculenta HOM05D005934 ORTHO05D005165 1.8e-118 430.3 421 64.8
COL.COLO4_23717 Corchorus olitorius HOM05D005934 ORTHO05D005165 2.0e-117 426.8 443 62.1
Nitab4.5_0000233g0170 Nicotiana tabacum HOM05D005934 ORTHO05D005165 2.0e-117 426.8 448 60.0
TWI63G0603 Tripterygium wilfordii HOM05D005934 ORTHO05D005165 5.7e-117 425.2 458 58.5
Sp6g12980 Schrenkiella parvula HOM05D005934 ORTHO05D005165 1.8e-115 420.2 427 62.8
Carub.0008s1083 Capsella rubella HOM05D005934 ORTHO05D005165 1.2e-114 417.5 421 61.5
BolC3t14330H Brassica oleracea HOM05D005934 ORTHO05D005165 1.6e-114 417.2 420 61.4
Psat6g182920 Pisum sativum HOM05D005934 ORTHO05D005165 1.6e-114 417.2 426 60.8
Aqoxy2G01769 Aquilegia oxysepala HOM05D005934 ORTHO05D005165 2.7e-114 416.4 422 59.7
C03p19490 Brassica napus HOM05D005934 ORTHO05D005165 5.9e-114 415.2 417 60.4
CiPaw.02G175500 Carya illinoinensis HOM05D005934 ORTHO05D005165 1.0e-113 414.5 350 70.9
CSS0015713 Camellia sinensis var. sinensis HOM05D005934 ORTHO05D005165 1.3e-113 414.1 453 59.6
A03p16560 Brassica napus HOM05D005934 ORTHO05D005165 2.9e-113 412.9 428 61.0
BraA03t10943Z Brassica rapa HOM05D005934 ORTHO05D005165 2.9e-113 412.9 428 61.0
Thhalv10013687m.g Eutrema salsugineum HOM05D005934 ORTHO05D005165 6.5e-113 411.8 422 61.6
Lalb_Chr02g0141961 Lupinus albus HOM05D005934 ORTHO05D005165 6.5e-113 411.8 443 58.0
Cpa.g.sc53.46 Carica papaya HOM05D005934 ORTHO05D005165 8.5e-113 411.4 464 58.2
Solyc04g047750.3 Solanum lycopersicum HOM05D005934 ORTHO05D005165 1.9e-112 410.2 424 61.6
TAR636G3344 Trochodendron aralioides HOM05D005934 ORTHO05D005165 1.9e-112 410.2 479 54.7
Sopen04g017890 Solanum pennellii HOM05D005934 ORTHO05D005165 2.5e-112 409.8 424 61.8
AT5G50840 Arabidopsis thaliana HOM05D005934 ORTHO05D005165 4.2e-112 409.1 419 60.4
CSS0046829 Camellia sinensis var. sinensis HOM05D005934 ORTHO05D005165 9.4e-112 407.9 434 59.7
PSO339G5008 Papaver somniferum HOM05D005934 ORTHO05D005165 8.0e-111 404.8 456 57.9
CAN.G471.3 Capsicum annuum HOM05D005934 ORTHO05D005165 2.3e-110 403.3 422 59.7
AL8G25010 Arabidopsis lyrata HOM05D005934 ORTHO05D005165 3.0e-110 402.9 420 59.3
Sed0003296 Sechium edule HOM05D005934 ORTHO05D005165 4.0e-110 402.5 441 59.4
CARHR257410 Cardamine hirsuta HOM05D005934 ORTHO05D005165 8.8e-110 401.4 424 60.1
Dinv31355 Davidia involucrata HOM05D005934 ORTHO05D005165 1.2e-109 401.0 468 56.0
EL10Ac2g03586 Beta vulgaris HOM05D005934 ORTHO05D005165 3.4e-109 399.4 491 52.3
Sc09g0006590 Simmondsia chinensis HOM05D005934 ORTHO05D005165 8.3e-108 394.8 456 55.9
PSO541G4936 Papaver somniferum HOM05D005934 ORTHO05D005165 9.1e-107 391.3 453 57.6
BcaC03g14634 Brassica carinata HOM05D005934 ORTHO05D005165 1.0e-105 387.9 414 60.1
BcaB05g24030 Brassica carinata HOM05D005934 ORTHO05D005165 2.9e-105 386.3 420 57.1
C02p20680 Brassica napus HOM05D005934 ORTHO05D005165 5.0e-105 385.6 415 59.8
BolC2t08210H Brassica oleracea HOM05D005934 ORTHO05D005165 5.0e-105 385.6 415 59.8
vmacro07085 Vaccinium macrocarpon HOM05D005934 ORTHO05D005165 1.5e-104 384.0 656 45.9
MSTRG.27465 Avicennia marina HOM05D005934 ORTHO05D005165 1.2e-103 380.9 419 58.2
Cc02_g11420 Coffea canephora HOM05D005934 ORTHO05D005165 4.7e-103 379.0 412 58.7
GSVIVG01016314001 Vitis vinifera HOM05D005934 ORTHO05D005165 1.8e-102 377.1 428 57.2
ClCG09G020550 Citrullus lanatus HOM05D005934 ORTHO05D005165 2.0e-101 373.6 460 53.5
Gorai.012G094400 Gossypium raimondii HOM05D005934 ORTHO05D005165 1.4e-99 367.5 352 63.4
unitig_899.g14449 Utricularia gibba HOM05D005934 ORTHO05D005165 1.8e-99 367.1 424 57.1
Dinv11795 Davidia involucrata HOM05D005934 ORTHO05D005165 9.2e-99 364.8 438 56.2
Ah.11g043450 Amaranthus hybridus HOM05D005934 ORTHO05D005165 1.2e-98 364.4 439 52.6
BraA02t06319Z Brassica rapa HOM05D005934 ORTHO05D005165 1.2e-98 364.4 423 57.2
A02p12610 Brassica napus HOM05D005934 ORTHO05D005165 4.5e-98 362.5 407 58.2
Migut.F01993 Erythranthe guttata HOM05D005934 ORTHO05D005165 7.8e-98 361.7 416 56.0
AUR62027949 Chenopodium quinoa HOM05D005934 ORTHO05D005165 3.6e-95 352.8 516 47.1
ATR0759G024 Amborella trichopoda HOM05D005934 ORTHO05D005165 4.4e-93 345.9 310 63.5
Oeu043928.1 Olea europaea HOM05D005934 ORTHO05D005165 1.7e-92 344.0 429 55.0
SGA_v2.0_scaffold13G06359 Striga asiatica HOM05D005934 ORTHO05D005165 8.3e-92 341.7 424 54.5
Os03g0288600 Oryza sativa ssp. japonica HOM05D005934 ORTHO05D005165 1.4e-91 340.9 434 48.6
Potri.010G219700 Populus trichocarpa HOM05D005934 ORTHO05D005165 1.4e-91 340.9 463 50.5
TAR633G0441 Trochodendron aralioides HOM05D005934 ORTHO05D005165 2.5e-88 330.1 472 50.0
Sabra10G0169500 Salix brachista HOM05D005934 ORTHO05D005165 5.6e-88 328.9 463 49.2
THA.LOC104819151 Tarenaya hassleriana HOM05D005934 ORTHO05D005165 1.1e-86 324.7 417 53.0
AUR62020763 Chenopodium quinoa HOM05D005934 ORTHO05D005165 4.4e-85 319.3 459 48.4
Zm00001eb397090 Zea mays HOM05D005934 ORTHO05D005165 2.2e-84 317.0 424 49.1
Hund19343 Selenicereus undatus HOM05D005934 ORTHO05D005165 7.0e-83 312.0 412 50.7
CsaV3_5G025820 Cucumis sativus L. HOM05D005934 ORTHO05D005165 6.0e-82 308.9 460 48.9
HanXRQChr11g0323311 Helianthus annuus HOM05D005934 ORTHO05D005165 2.6e-77 293.5 461 46.6
Lj1C919T16 Lonicera japonica HOM05D005934 ORTHO05D005165 4.4e-77 292.7 260 68.1
ECA238G0735 Erigeron canadensis HOM05D005934 ORTHO05D005165 3.7e-76 289.7 450 47.3
Aa31LG3G7310 Aethionema arabicum HOM05D005934 ORTHO05D005165 5.4e-75 285.8 422 49.1
HanXRQChr14g0457271 Helianthus annuus HOM05D005934 ORTHO05D005165 1.7e-73 280.8 439 47.8
MELO3C002886.2 Cucumis melo HOM05D005934 ORTHO05D005165 3.3e-72 276.6 304 58.6
Aa31LG3G7290 Aethionema arabicum HOM05D005934 ORTHO05D005165 1.8e-70 270.8 333 54.1
Zm00001eb013240 Zea mays HOM05D005934 ORTHO05D005165 9.9e-69 265.0 437 44.6
DCAR_003640 Daucus carota HOM05D005934 ORTHO05D005165 8.4e-68 261.9 232 65.9
Lsat_1_v5_gn_2_113761 Lactuca sativa HOM05D005934 ORTHO05D005165 1.6e-63 247.7 440 43.4
SMO201G0134 Selaginella moellendorffii HOM05D005934 ORTHO05D005165 1.1e-59 235.0 253 53.4
Hund22502 Selenicereus undatus HOM05D005934 ORTHO05D005165 1.5e-56 224.6 292 52.1
CBR_g15990 Chara braunii HOM05D005934 ORTHO05D005165 5.4e-51 206.1 321 43.0
MBI05_g20541_MAGBIO Magnolia biondii HOM05D005934 ORTHO05D005165 1.8e-49 201.1 483 37.5
Mapoly0007s0101 Marchantia polymorpha HOM05D005934 ORTHO05D005165 1.6e-47 194.5 334 40.7
Actinidia38257 Actinidia chinensis HOM05D005934 ORTHO05D005165 1.6e-42 177.9 492 35.2
Pp3c11_23150 Physcomitrium patens HOM05D005934 ORTHO05D005165 1.2e-37 161.8 325 37.8
HPP92_006750 Vanilla planifolia HOM05D005934 ORTHO05D005165 5.1e-33 146.4 249 43.8
THA.LOC104819150 Tarenaya hassleriana HOM05D005934 ORTHO05D005165 1.9e-32 144.4 171 56.7
Nn2g10703 Nelumbo nucifera HOM05D005934 ORTHO05D005165 2.0e-29 134.4 87 83.9
A03p42390 Brassica napus HOM05D005934 ORTHO05D005165 4.8e-23 113.2 101 66.3
BraA03t13391Z Brassica rapa HOM05D005934 ORTHO05D005165 4.8e-23 113.2 101 66.3
SalBow4G0998 Salvia bowleyana HOM05D011515 ORTHO05D005165 4.1e-22 110.2 90 66.7
Peaxi162Scf00108g01217 Petunia axillaris HOM05D005934 ORTHO05D005165 5.3e-22 109.8 344 32.8
Lsat_1_v5_gn_1_128800 Lactuca sativa HOM05D005934 ORTHO05D005165 1.2e-21 108.6 183 45.4
SalBow4G2489 Salvia bowleyana HOM05D011515 ORTHO05D005165 4.5e-21 106.7 90 65.6
Peaxi162Scf00108g01212 Petunia axillaris HOM05D005934 ORTHO05D005165 2.5e-19 100.9 158 46.2
Actinidia03038 Actinidia chinensis HOM05D005934 ORTHO05D005165 1.0e-17 95.5 156 46.2
MCO09G455 Micromonas commoda HOM05D005934 ORTHO05D005165 1.7e-15 88.2 262 32.4
Atru.chr12.721 Acer truncatum HOM05D002519 ORTHO05D005165 1.4e-14 85.1 87 57.5
Medtr1g101870 Medicago truncatula HOM05D000280 ORTHO05D000632 2.2e-12 77.8 50 80.0
Cre12.g546300 Chlamydomonas reinhardtii HOM05D005934 ORTHO05D005165 2.5e-11 74.3 244 31.6
HPP92_006751 Vanilla planifolia HOM05D005934 ORTHO05D005165 3.7e-07 60.5 123 43.9
Actinidia03037 Actinidia chinensis HOM05D005934 ORTHO05D005165 9.1e-06 55.8 138 31.2


User provided reference genes

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