Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.G02795 Eucalyptus grandis HOM05D005940 ORTHO05D007027 1.1e-209 733.0 366 100.0
GSVIVG01016348001 Vitis vinifera HOM05D005940 ORTHO05D007027 4.9e-117 425.2 358 59.8
Duzib114G0016 Durio zibethinus HOM05D005940 ORTHO05D007027 5.5e-116 421.8 368 60.3
Lj5g0027680 Lotus japonicus HOM05D005940 ORTHO05D007027 5.5e-116 421.8 360 60.3
Glyma.20G145700 Glycine max HOM05D005940 ORTHO05D007027 7.9e-115 417.9 364 59.1
Ciclev10033357m.g Citrus clementina HOM05D005940 ORTHO05D007027 1.3e-114 417.2 366 58.7
TAR623G0325 Trochodendron aralioides HOM05D005940 ORTHO05D007027 1.3e-114 417.2 360 58.9
FAN06G4195 Fragaria x ananassa HOM05D005940 ORTHO05D007027 2.3e-114 416.4 361 58.7
Atru.chr12.628 Acer truncatum HOM05D005940 ORTHO05D007027 3.9e-114 415.6 361 57.9
Gorai.012G093100 Gossypium raimondii HOM05D005940 ORTHO05D007027 6.7e-114 414.8 372 57.8
Phvul.007G056900 Phaseolus vulgaris HOM05D005940 ORTHO05D007027 8.7e-114 414.5 360 58.1
FAN10G2498 Fragaria x ananassa HOM05D005940 ORTHO05D007027 1.5e-113 413.7 364 58.0
Sed0018989 Sechium edule HOM05D005940 ORTHO05D007027 1.3e-112 410.6 361 59.3
ClCG02G013840 Citrullus lanatus HOM05D005940 ORTHO05D007027 1.6e-112 410.2 360 59.2
RcHm_v2.0_Chr1g0364231 Rosa chinensis HOM05D005940 ORTHO05D007027 2.1e-112 409.8 361 58.2
VMungo0720G1649 Vigna mungo HOM05D005940 ORTHO05D007027 2.1e-112 409.8 335 61.5
Cfa001588 Carpinus fangiana HOM05D005940 ORTHO05D007027 4.8e-112 408.7 359 57.4
CiPaw.02G177100 Carya illinoinensis HOM05D005940 ORTHO05D007027 8.1e-112 407.9 360 57.5
TWI38G0416 Tripterygium wilfordii HOM05D005940 ORTHO05D007027 1.1e-111 407.5 360 58.3
CANSAT25G0128 Cannabis sativa HOM05D005940 ORTHO05D007027 5.3e-111 405.2 372 54.3
Medtr1g103900 Medicago truncatula HOM05D005940 ORTHO05D007027 5.3e-111 405.2 362 57.5
Medtr1g103870 Medicago truncatula HOM05D005940 ORTHO05D007027 2.0e-110 403.3 360 55.8
Oeu055049.1 Olea europaea HOM05D005940 ORTHO05D007027 2.6e-110 402.9 356 56.2
QL08p056963 Quercus lobata HOM05D005940 ORTHO05D007027 3.4e-110 402.5 363 59.5
TPR.G5540 Trifolium pratense HOM05D005940 ORTHO05D007027 5.8e-110 401.7 359 55.4
Potri.010G216500 Populus trichocarpa HOM05D005940 ORTHO05D007027 2.2e-109 399.8 365 58.4
Nn2g10645 Nelumbo nucifera HOM05D005940 ORTHO05D007027 2.9e-109 399.4 352 57.4
FvH4_7g20280 Fragaria vesca HOM05D005940 ORTHO05D007027 3.8e-109 399.1 345 58.0
Prupe.2G219400 Prunus persica HOM05D005940 ORTHO05D007027 3.8e-109 399.1 365 56.7
PGR102G2278 Punica granatum HOM05D005940 ORTHO05D007027 6.5e-109 398.3 365 56.7
Cc09_g02600 Coffea canephora HOM05D005940 ORTHO05D007027 8.4e-109 397.9 357 56.3
Medtr1g030720 Medicago truncatula HOM05D005940 ORTHO05D007027 8.4e-109 397.9 362 57.2
Gohir.D04G082400 Gossypium hirsutum HOM05D005940 ORTHO05D007027 1.1e-108 397.5 372 56.2
DCAR_019137 Daucus carota HOM05D005940 ORTHO05D007027 5.5e-108 395.2 347 57.3
Prupe.2G216400 Prunus persica HOM05D005940 ORTHO05D007027 9.3e-108 394.4 362 56.6
Hma1.2p1_0192F.1_g083550 Hydrangea macrophylla HOM05D005940 ORTHO05D007027 2.1e-107 393.3 377 55.2
FAN01G1689 Fragaria x ananassa HOM05D005940 ORTHO05D007027 2.7e-107 392.9 361 56.2
Aqoxy7G03246 Aquilegia oxysepala HOM05D005940 ORTHO05D007027 1.0e-106 391.0 365 57.0
ECA232G2986 Erigeron canadensis HOM05D005940 ORTHO05D007027 1.0e-106 391.0 362 55.5
CsaV3_5G006320 Cucumis sativus L. HOM05D005940 ORTHO05D007027 1.3e-106 390.6 360 57.8
Psat6g207800 Pisum sativum HOM05D005940 ORTHO05D007027 1.9e-105 386.7 341 57.5
Migut.F01794 Erythranthe guttata HOM05D005940 ORTHO05D007027 9.6e-105 384.4 363 55.9
Lsat_1_v5_gn_1_128021 Lactuca sativa HOM05D005940 ORTHO05D007027 2.8e-104 382.9 360 55.0
PSO170G0010 Papaver somniferum HOM05D005940 ORTHO05D007027 4.1e-103 379.0 360 53.3
MD01G1112500 Malus domestica HOM05D005940 ORTHO05D007027 5.3e-103 378.6 359 56.8
Nitab4.5_0000061g0280 Nicotiana tabacum HOM05D005940 ORTHO05D007027 5.3e-103 378.6 345 53.3
arahy.Tifrunner.gnm1.ann1.N3JKH2 Arachis hypogaea HOM05D005940 ORTHO05D007027 6.9e-103 378.3 364 54.1
PGSC0003DMG400010575 Solanum tuberosum HOM05D005940 ORTHO05D007027 2.0e-102 376.7 359 52.9
Lj1A925T62 Lonicera japonica HOM05D005940 ORTHO05D007027 2.6e-102 376.3 338 58.0
Ca_10908_v3 Cicer arietinum L. HOM05D005940 ORTHO05D007027 5.9e-102 375.2 333 56.8
HanXRQChr16g0510921 Helianthus annuus HOM05D005940 ORTHO05D007027 1.0e-101 374.4 361 54.0
PSO357G0422 Papaver somniferum HOM05D005940 ORTHO05D007027 1.0e-101 374.4 360 53.1
arahy.Tifrunner.gnm1.ann1.3UA0UH Arachis hypogaea HOM05D005940 ORTHO05D007027 6.5e-101 371.7 364 53.3
Lalb_Chr21g0304671 Lupinus albus HOM05D005940 ORTHO05D007027 3.2e-100 369.4 357 55.2
Solyc04g049890.4 Solanum lycopersicum HOM05D005940 ORTHO05D007027 4.2e-100 369.0 359 51.5
Peaxi162Scf00208g00211 Petunia axillaris HOM05D005940 ORTHO05D007027 5.5e-100 368.6 359 51.3
Sopen04g020430 Solanum pennellii HOM05D005940 ORTHO05D007027 1.5e-97 360.5 366 50.0
Dinv31364 Davidia involucrata HOM05D005940 ORTHO05D007027 2.5e-97 359.8 303 59.4
THA.LOC104809986 Tarenaya hassleriana HOM05D005940 ORTHO05D007027 3.3e-97 359.4 368 53.5
Thecc.10G067000 Theobroma cacao HOM05D005940 ORTHO05D007027 1.6e-96 357.1 301 60.5
Sp5g07450 Schrenkiella parvula HOM05D005940 ORTHO05D007027 5.9e-94 348.6 368 54.1
BcaNung04648 Brassica carinata HOM05D005940 ORTHO05D007027 1.7e-93 347.1 367 53.1
BolC8t50626H Brassica oleracea HOM05D005940 ORTHO05D007027 3.8e-93 345.9 363 53.2
Thhalv10010491m.g Eutrema salsugineum HOM05D005940 ORTHO05D007027 6.5e-93 345.1 372 51.6
BcaB01g00141 Brassica carinata HOM05D005940 ORTHO05D007027 7.2e-92 341.7 364 54.4
C08p30200 Brassica napus HOM05D005940 ORTHO05D007027 2.7e-91 339.7 350 53.7
FAN03G1319 Fragaria x ananassa HOM05D005940 ORTHO05D007027 2.7e-91 339.7 316 56.3
AL5G36080 Arabidopsis lyrata HOM05D005940 ORTHO05D007027 4.6e-91 339.0 368 52.7
A09p47960 Brassica napus HOM05D005940 ORTHO05D007027 7.9e-91 338.2 350 52.6
BraA09t40251Z Brassica rapa HOM05D005940 ORTHO05D007027 3.9e-90 335.9 363 52.1
CARHR164970 Cardamine hirsuta HOM05D005940 ORTHO05D007027 5.1e-90 335.5 359 52.9
Aa31sc33G20 Aethionema arabicum HOM05D005940 ORTHO05D007027 8.8e-90 334.7 387 49.9
Carub.0005s2159 Capsella rubella HOM05D005940 ORTHO05D007027 2.0e-89 333.6 368 53.0
EL10Ac2g03550 Beta vulgaris HOM05D005940 ORTHO05D007027 9.7e-89 331.3 340 52.4
AUR62027909 Chenopodium quinoa HOM05D005940 ORTHO05D007027 2.2e-88 330.1 379 50.9
AUR62020800 Chenopodium quinoa HOM05D005940 ORTHO05D007027 2.8e-88 329.7 331 55.3
CDE11G0619 Ceratophyllum demersum HOM05D005940 ORTHO05D007027 3.1e-87 326.2 335 51.0
COL.COLO4_23758 Corchorus olitorius HOM05D005940 ORTHO05D007027 2.5e-84 316.6 253 62.5
Manes.10G041400 Manihot esculenta HOM05D005940 ORTHO05D007027 2.5e-84 316.6 284 57.4
Cpa.g.sc1.266 Carica papaya HOM05D005940 ORTHO05D007027 3.2e-84 316.2 277 60.3
SGA_v2.0_scaffold122G33246 Striga asiatica HOM05D005940 ORTHO05D007027 7.9e-83 311.6 367 48.2
MELO3C011725.2 Cucumis melo HOM05D005940 ORTHO05D007027 1.0e-82 311.2 300 55.7
HPP92_019787 Vanilla planifolia HOM05D005940 ORTHO05D007027 1.8e-82 310.5 361 49.0
SalBow3G3596 Salvia bowleyana HOM05D005940 ORTHO05D007027 9.7e-81 304.7 357 46.8
Rhsim09G0154600 Rhododendron simsii HOM05D005940 ORTHO05D007027 2.8e-80 303.1 272 58.5
Gohir.A05G343900 Gossypium hirsutum HOM05D005940 ORTHO05D007027 3.7e-80 302.8 278 57.6
Nitab4.5_0003582g0030 Nicotiana tabacum HOM05D005940 ORTHO05D007027 9.1e-79 298.1 258 54.3
Hma1.2p1_0192F.1_g083560 Hydrangea macrophylla HOM05D005940 ORTHO05D007027 7.2e-76 288.5 251 58.2
Zm00001eb194920 Zea mays HOM05D005940 ORTHO05D007027 3.6e-75 286.2 357 47.3
CAN.G693.9 Capsicum annuum HOM05D005940 ORTHO05D007027 4.7e-75 285.8 286 51.0
Sabra10G0167600 Salix brachista HOM05D005940 ORTHO05D007027 1.4e-74 284.3 273 56.0
ATR0594G026 Amborella trichopoda HOM05D005940 ORTHO05D007027 3.4e-65 253.1 301 49.5
Haze_16942 Corylus avellana HOM05D005940 ORTHO05D007027 2.2e-64 250.4 228 55.7
AT3G54970 Arabidopsis thaliana HOM05D005940 ORTHO05D007027 2.7e-62 243.4 274 52.6
Hund22470 Selenicereus undatus HOM05D005940 ORTHO05D007027 3.0e-58 229.9 336 42.3
PGR142G2620 Punica granatum HOM05D005940 ORTHO05D007027 4.4e-57 226.1 274 47.4
AagrBONN_evm.TU.Sc2ySwM_344.1014 Anthoceros agrestis HOM05D005940 ORTHO05D007027 3.7e-56 223.0 344 40.4
Sc06g0001810 Simmondsia chinensis HOM05D005940 ORTHO05D007027 3.8e-53 213.0 172 63.4
BcaNung04643 Brassica carinata HOM05D005940 ORTHO05D007027 1.8e-50 204.1 281 44.5
Mapoly0016s0023 Marchantia polymorpha HOM05D005940 ORTHO05D007027 2.0e-49 200.7 362 36.2
CSS0031020 Camellia sinensis var. sinensis HOM05D005940 ORTHO05D007027 3.7e-48 196.4 192 53.6
Pp3c1_190 Physcomitrium patens HOM05D005940 ORTHO05D007027 6.4e-48 195.7 336 38.1
SMO329G0058 Selaginella moellendorffii HOM05D005940 ORTHO05D007027 1.8e-47 194.1 344 35.5
SMO201G0153 Selaginella moellendorffii HOM05D005940 ORTHO05D007027 2.5e-44 183.7 355 34.9
Os02g0252600 Oryza sativa ssp. japonica HOM05D005940 ORTHO05D007027 1.7e-40 171.0 222 45.0
SEGI_22112 Sequoiadendron giganteum HOM05D005940 ORTHO05D007027 4.9e-40 169.5 225 44.4
SHI28162 Sapria himalayana HOM05D005940 ORTHO05D007027 3.9e-37 159.8 159 49.1
Medtr1g030710 Medicago truncatula HOM05D005940 ORTHO05D007027 5.4e-31 139.4 222 42.3
CBR_g3301 Chara braunii HOM05D003248 ORTHO05D000301 1.8e-26 124.4 378 25.7
unitig_46.g18613 Utricularia gibba HOM05D005940 ORTHO05D007027 1.4e-23 114.8 188 39.4
MBI14_g28170_MAGBIO Magnolia biondii HOM05D005940 ORTHO05D007027 1.9e-23 114.4 90 61.1
Haze_16941 Corylus avellana HOM05D005940 ORTHO05D007027 3.9e-21 106.7 125 47.2
FAN06G2675 Fragaria x ananassa HOM05D005940 ORTHO05D007027 7.3e-20 102.4 235 35.3
Sopen09g009530 Solanum pennellii HOM05D005940 ORTHO05D007027 1.2e-19 101.7 87 51.7
ECA240G2370 Erigeron canadensis HOM05D005940 ORTHO05D007027 1.8e-18 97.8 74 60.8
Cre01.g033516 Chlamydomonas reinhardtii HOM05D005940 ORTHO05D007027 2.2e-16 90.9 187 32.6
SEGI_30186 Sequoiadendron giganteum HOM05D005940 ORTHO05D007027 2.4e-15 87.4 96 44.8
SHI28160 Sapria himalayana HOM05D000105 ORTHO05D000023 2.1e-14 84.3 69 62.3
PRCOL_00002492 Prasinoderma coloniale HOM05D005940 ORTHO05D007027 1.3e-13 81.6 200 34.5
TPR.G40057 Trifolium pratense HOM05D005940 ORTHO05D007027 2.3e-13 80.9 68 54.4
MCO14G149 Micromonas commoda HOM05D005940 ORTHO05D007027 2.5e-12 77.4 356 23.6
PRCOL_00002155 Prasinoderma coloniale HOM05D005940 ORTHO05D007027 6.2e-11 72.8 211 28.0
HPP92_019693 Vanilla planifolia HOM05D005940 ORTHO05D002769 6.9e-10 69.3 58 55.2
CSS0028355 Camellia sinensis var. sinensis HOM05D005940 ORTHO05D007027 3.8e-08 63.5 38 73.7
SMO112G0074 Selaginella moellendorffii HOM05D005940 ORTHO05D007027 3.8e-08 63.5 180 31.7
Cre01.g033763 Chlamydomonas reinhardtii HOM05D005940 ORTHO05D007027 1.1e-07 62.0 58 53.4
CSS0026064 Camellia sinensis var. sinensis HOM05D005940 ORTHO05D007027 1.4e-07 61.6 59 45.8


User provided reference genes

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