Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.G02667 Eucalyptus grandis HOM05D006565 ORTHO05D008717 8.4e-194 680.2 362 100.0
TAR636G0179 Trochodendron aralioides HOM05D006565 ORTHO05D008717 2.1e-136 489.6 313 74.8
CiPaw.14G036000 Carya illinoinensis HOM05D006565 ORTHO05D008717 3.6e-136 488.8 305 78.0
Aqoxy1G00616 Aquilegia oxysepala HOM05D006565 ORTHO05D008717 1.7e-133 479.9 291 78.7
Glyma.20G195000 Glycine max HOM05D006565 ORTHO05D008717 4.9e-133 478.4 289 78.2
Thecc.10G119100 Theobroma cacao HOM05D006565 ORTHO05D008717 8.3e-133 477.6 290 78.3
Lalb_Chr06g0169851 Lupinus albus HOM05D006565 ORTHO05D008717 1.4e-132 476.9 294 77.9
QL04p048612 Quercus lobata HOM05D006565 ORTHO05D008717 1.8e-132 476.5 292 78.8
Duzib114G0050 Durio zibethinus HOM05D006565 ORTHO05D008717 2.4e-132 476.1 290 77.9
Lj5g0019410 Lotus japonicus HOM05D006565 ORTHO05D008717 5.4e-132 474.9 319 73.4
GSVIVG01034599001 Vitis vinifera HOM05D006565 ORTHO05D008717 9.2e-132 474.2 297 76.4
ClCG05G021990 Citrullus lanatus HOM05D006565 ORTHO05D008717 1.3e-130 470.3 300 75.3
FvH4_7g05460 Fragaria vesca HOM05D006565 ORTHO05D008717 5.0e-130 468.4 292 77.1
Gohir.A05G286300 Gossypium hirsutum HOM05D006565 ORTHO05D008717 6.6e-130 468.0 306 73.5
Actinidia34736 Actinidia chinensis HOM05D006565 ORTHO05D008717 8.6e-130 467.6 299 74.9
Ciclev10015763m.g Citrus clementina HOM05D006565 ORTHO05D008717 1.1e-129 467.2 288 77.8
Gorai.009G302300 Gossypium raimondii HOM05D006565 ORTHO05D008717 1.1e-129 467.2 306 73.9
MELO3C012330.2 Cucumis melo HOM05D006565 ORTHO05D008717 1.9e-129 466.5 300 74.3
Manes.10G059200 Manihot esculenta HOM05D006565 ORTHO05D008717 2.5e-129 466.1 301 75.7
Gohir.D05G287300 Gossypium hirsutum HOM05D006565 ORTHO05D008717 3.3e-129 465.7 306 73.5
MD07G1062700 Malus domestica HOM05D006565 ORTHO05D008717 9.5e-129 464.2 288 77.1
arahy.Tifrunner.gnm1.ann1.51BCJ8 Arachis hypogaea HOM05D006565 ORTHO05D008717 1.2e-128 463.8 318 71.7
CsaV3_5G035170 Cucumis sativus L. HOM05D006565 ORTHO05D008717 2.1e-128 463.0 312 72.1
arahy.Tifrunner.gnm1.ann1.V0HLME Arachis hypogaea HOM05D006565 ORTHO05D008717 3.6e-128 462.2 318 71.4
Potri.010G243900 Populus trichocarpa HOM05D006565 ORTHO05D008717 3.6e-128 462.2 306 74.2
Atru.chr12.1084 Acer truncatum HOM05D006565 ORTHO05D008717 4.7e-128 461.8 308 73.4
Cc02_g09290 Coffea canephora HOM05D006565 ORTHO05D008717 1.0e-127 460.7 290 75.2
PSO339G2240 Papaver somniferum HOM05D006565 ORTHO05D008717 1.4e-127 460.3 314 71.7
vmacro10331 Vaccinium macrocarpon HOM05D006565 ORTHO05D008717 3.0e-127 459.1 311 72.7
Prupe.2G073700 Prunus persica HOM05D006565 ORTHO05D008717 5.2e-127 458.4 293 75.4
Lj3A921T38 Lonicera japonica HOM05D006565 ORTHO05D008717 8.9e-127 457.6 274 81.0
RcHm_v2.0_Chr1g0332191 Rosa chinensis HOM05D006565 ORTHO05D008717 8.9e-127 457.6 289 76.1
TWI15G0448 Tripterygium wilfordii HOM05D006565 ORTHO05D008717 4.4e-126 455.3 289 77.5
SGA_v2.0_scaffold90G27708 Striga asiatica HOM05D006565 ORTHO05D008717 5.7e-126 454.9 307 73.0
Rhsim09G0140500 Rhododendron simsii HOM05D006565 ORTHO05D008717 7.5e-126 454.5 309 72.5
Migut.F00832 Erythranthe guttata HOM05D006565 ORTHO05D008717 1.3e-125 453.8 310 71.0
Sed0004638 Sechium edule HOM05D006565 ORTHO05D008717 3.7e-125 452.2 291 75.6
Ca_10426_v3 Cicer arietinum L. HOM05D006565 ORTHO05D008717 4.9e-125 451.8 290 75.2
Nn2g14368 Nelumbo nucifera HOM05D006565 ORTHO05D008717 1.8e-124 449.9 314 71.7
A03p21520 Brassica napus HOM05D006565 ORTHO05D008717 9.2e-124 447.6 297 72.1
VMungo0720G0186 Vigna mungo HOM05D006565 ORTHO05D008717 1.6e-123 446.8 311 70.7
Sc07g0003130 Simmondsia chinensis HOM05D006565 ORTHO05D008717 2.7e-123 446.0 288 75.7
TPR.G10259 Trifolium pratense HOM05D006565 ORTHO05D008717 3.5e-123 445.7 289 73.7
Sabra10G0190700 Salix brachista HOM05D006565 ORTHO05D008717 5.9e-123 444.9 328 67.7
THA.LOC104801973 Tarenaya hassleriana HOM05D006565 ORTHO05D008717 1.3e-122 443.7 318 68.9
MSTRG.9025 Avicennia marina HOM05D006565 ORTHO05D008717 3.0e-122 442.6 324 67.6
CANSAT56G1291 Cannabis sativa HOM05D006565 ORTHO05D008717 1.9e-121 439.9 309 70.6
Medtr1g090380 Medicago truncatula HOM05D006565 ORTHO05D008717 2.5e-121 439.5 284 74.6
Sp4g21020 Schrenkiella parvula HOM05D006565 ORTHO05D008717 3.3e-121 439.1 301 71.1
Os03g0648900 Oryza sativa ssp. japonica HOM05D006565 ORTHO05D008717 5.6e-121 438.3 288 72.2
Psat6g171600 Pisum sativum HOM05D006565 ORTHO05D008717 5.6e-121 438.3 300 71.0
Dinv03812 Davidia involucrata HOM05D006565 ORTHO05D008717 1.2e-120 437.2 293 73.4
Sopen11g002320 Solanum pennellii HOM05D006565 ORTHO05D008717 8.0e-120 434.5 294 71.4
Carub.0004s2066 Capsella rubella HOM05D006565 ORTHO05D008717 1.0e-119 434.1 314 68.8
HPP92_013938 Vanilla planifolia HOM05D006565 ORTHO05D008717 1.8e-119 433.3 288 70.5
COL.COLO4_10008 Corchorus olitorius HOM05D006565 ORTHO05D008717 2.3e-119 433.0 286 74.1
EL10Ac4g08734 Beta vulgaris HOM05D006565 ORTHO05D008717 4.0e-119 432.2 321 66.7
HanXRQChr02g0049321 Helianthus annuus HOM05D006565 ORTHO05D008717 5.2e-119 431.8 290 71.4
CARHR133350 Cardamine hirsuta HOM05D006565 ORTHO05D008717 8.9e-119 431.0 299 70.2
AUR62034160 Chenopodium quinoa HOM05D006565 ORTHO05D008717 8.9e-119 431.0 292 70.5
Solyc11g006420.2 Solanum lycopersicum HOM05D006565 ORTHO05D008717 8.9e-119 431.0 294 70.7
ATR0697G221 Amborella trichopoda HOM05D006565 ORTHO05D008717 1.2e-118 430.6 278 73.0
AUR62014278 Chenopodium quinoa HOM05D006565 ORTHO05D008717 2.6e-118 429.5 288 71.9
RhsimUnG0215000 Rhododendron simsii HOM05D006565 ORTHO05D008717 3.4e-118 429.1 347 63.7
CAN.G143.52 Capsicum annuum HOM05D006565 ORTHO05D008717 5.8e-118 428.3 286 71.0
PGSC0003DMG400014108 Solanum tuberosum HOM05D006565 ORTHO05D008717 7.5e-118 427.9 294 68.7
Thhalv10016992m.g Eutrema salsugineum HOM05D006565 ORTHO05D008717 9.8e-118 427.6 301 69.4
HanXRQChr08g0217341 Helianthus annuus HOM05D006565 ORTHO05D008717 1.7e-117 426.8 300 69.7
Zm00001eb218510 Zea mays HOM05D006565 ORTHO05D008717 3.7e-117 425.6 288 70.8
ECA233G2794 Erigeron canadensis HOM05D006565 ORTHO05D008717 6.4e-117 424.9 307 66.8
Dinv06042 Davidia involucrata HOM05D006565 ORTHO05D008717 1.1e-116 424.1 272 74.6
Phvul.007G137100 Phaseolus vulgaris HOM05D006565 ORTHO05D008717 5.4e-116 421.8 289 71.3
AT2G38680 Arabidopsis thaliana HOM05D006565 ORTHO05D008717 5.0e-114 415.2 298 68.5
BraA03t11388Z Brassica rapa HOM05D006565 ORTHO05D008717 6.6e-114 414.8 275 72.4
Peaxi162Scf00120g01317 Petunia axillaris HOM05D006565 ORTHO05D008717 4.3e-113 412.1 331 61.6
BolC3t14938H Brassica oleracea HOM05D006565 ORTHO05D008717 7.3e-113 411.4 275 71.6
Hund06810 Selenicereus undatus HOM05D006565 ORTHO05D008717 9.5e-113 411.0 289 70.6
Lsat_1_v5_gn_8_21800 Lactuca sativa HOM05D006565 ORTHO05D008717 8.9e-111 404.4 289 68.5
C03p25510 Brassica napus HOM05D006565 ORTHO05D008717 1.5e-110 403.7 297 68.0
CDE06G1733 Ceratophyllum demersum HOM05D006565 ORTHO05D008717 6.4e-109 398.3 271 71.2
Oeu009252.1 Olea europaea HOM05D006565 ORTHO05D008717 1.2e-107 394.0 309 65.0
Nitab4.5_0001781g0210 Nicotiana tabacum HOM05D006565 ORTHO05D008717 7.8e-107 391.3 293 67.6
FAN01G3085 Fragaria x ananassa HOM05D006565 ORTHO05D008717 1.7e-106 390.2 283 70.0
FAN06G1903 Fragaria x ananassa HOM05D006565 ORTHO05D008717 4.7e-104 382.1 275 71.3
AagrBONN_evm.TU.Sc2ySwM_228.2835 Anthoceros agrestis HOM05D006565 ORTHO05D008717 2.3e-103 379.8 290 65.5
SEGI_36612 Sequoiadendron giganteum HOM05D006565 ORTHO05D008717 7.6e-102 374.8 266 67.7
SMO367G1082 Selaginella moellendorffii HOM05D006565 ORTHO05D008717 5.4e-100 368.6 301 60.1
FAN10G4168 Fragaria x ananassa HOM05D006565 ORTHO05D008717 2.7e-99 366.3 300 65.0
Pp3c1_24570 Physcomitrium patens HOM05D006565 ORTHO05D008717 3.0e-98 362.8 288 61.5
Prupe.2G074100 Prunus persica HOM05D006565 ORTHO05D008717 1.8e-95 353.6 217 78.3
FAN21G0259 Fragaria x ananassa HOM05D006565 ORTHO05D008717 9.0e-95 351.3 275 65.8
Mapoly0082s0075 Marchantia polymorpha HOM05D006565 ORTHO05D008717 1.4e-92 344.0 264 61.4
AL4G35960 Arabidopsis lyrata HOM05D006565 ORTHO05D008717 2.4e-87 326.6 292 57.5
FvH4_1g27810 Fragaria vesca HOM05D006565 ORTHO05D008717 3.2e-84 316.2 253 66.8
PGSC0003DMG400001988 Solanum tuberosum HOM05D006565 ORTHO05D008717 1.1e-79 301.2 206 69.4
CBR_g36829 Chara braunii HOM05D006565 ORTHO05D001468 2.9e-77 293.1 406 41.9
Nitab4.5_0016854g0010 Nicotiana tabacum HOM05D006565 ORTHO05D008717 7.1e-76 288.5 223 65.9
Haze_03436 Corylus avellana HOM05D006565 ORTHO05D008717 3.8e-69 266.2 277 54.9
Lj3A922G54 Lonicera japonica HOM05D006565 ORTHO05D008717 3.7e-64 249.6 163 77.3
MBI05_g36782_MAGBIO Magnolia biondii HOM05D006565 ORTHO05D008717 3.4e-62 243.0 156 73.1
Sabra13G0091500 Salix brachista HOM05D006565 ORTHO05D008717 3.9e-58 229.6 150 74.7
Potri.008G015201 Populus trichocarpa HOM05D006565 ORTHO05D008717 1.4e-55 221.1 142 73.2
PSO384G3661 Papaver somniferum HOM05D006565 ORTHO05D008717 2.9e-53 213.4 157 68.2
FAN10G3234 Fragaria x ananassa HOM05D006565 ORTHO05D008717 2.0e-49 200.7 253 47.0
Glyma.10G195001 Glycine max HOM05D006565 ORTHO05D008717 4.5e-46 189.5 107 81.3
Hma1.2p1_0098F.1_g048200 Hydrangea macrophylla HOM05D006565 ORTHO05D008717 1.6e-43 181.0 105 79.0
Lj3A922G55 Lonicera japonica HOM05D006565 ORTHO05D008717 3.6e-35 153.3 89 79.8
Cpa.g.sc33.129 Carica papaya HOM05D006565 ORTHO05D008717 1.0e-34 151.8 98 72.4
Cpa.g.sc33.128 Carica papaya HOM05D006565 ORTHO05D008717 2.6e-33 147.1 82 82.9
FAN03G2487 Fragaria x ananassa HOM05D006565 ORTHO05D008717 5.5e-28 129.4 83 75.9
FAN10G0629 Fragaria x ananassa HOM05D006565 ORTHO05D008717 5.5e-28 129.4 83 75.9
CSS0040424 Camellia sinensis var. sinensis HOM05D006565 ORTHO05D008717 9.4e-28 128.6 66 83.3
Aqoxy6G01578 Aquilegia oxysepala HOM05D006565 ORTHO05D008717 2.3e-21 107.5 129 48.1
CSS0049814 Camellia sinensis var. sinensis HOM05D006565 ORTHO05D008717 7.2e-20 102.4 60 78.3
RhsimUnG0214900 Rhododendron simsii HOM05D006565 ORTHO05D008717 3.4e-17 93.6 78 62.8
MBI15_g31580_MAGBIO Magnolia biondii HOM05D001433 ORTHO05D011977 2.7e-14 84.0 60 66.7
MBI08_g05402_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 3.5e-14 83.6 56 71.4
MBI05_g33289_MAGBIO Magnolia biondii HOM05D006565 ORTHO05D008717 6.8e-10 69.3 50 66.0
Aqoxy6G01581 Aquilegia oxysepala HOM05D006565 ORTHO05D000596 1.5e-09 68.2 41 75.6
MBI17_g02193_MAGBIO Magnolia biondii HOM05D006565 ORTHO05D011977 2.6e-09 67.4 59 59.3
Psat7g239080 Pisum sativum HOM05D005767 ORTHO05D006785 3.2e-07 60.5 81 40.7
MBI06_g14037_MAGBIO Magnolia biondii HOM05D001433 ORTHO05D011977 4.6e-06 56.6 42 64.3


User provided reference genes

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