Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.G02638 Eucalyptus grandis HOM05D005754 ORTHO05D006843 1.8e-148 529.3 276 100.0
PGR142G3917 Punica granatum HOM05D005754 ORTHO05D006843 6.6e-114 414.5 297 73.4
CiPaw.09G178800 Carya illinoinensis HOM05D005754 ORTHO05D006843 1.4e-111 406.8 298 73.2
Duzib151G1210 Durio zibethinus HOM05D005754 ORTHO05D006843 2.3e-111 406.0 297 73.1
CiPaw.09G178700 Carya illinoinensis HOM05D005754 ORTHO05D006843 6.8e-111 404.4 298 72.5
QL03p068630 Quercus lobata HOM05D005754 ORTHO05D006843 2.0e-110 402.9 297 72.4
QL05p030092 Quercus lobata HOM05D005754 ORTHO05D006843 2.0e-110 402.9 297 72.4
Thecc.04G266000 Theobroma cacao HOM05D005754 ORTHO05D006843 6.4e-109 397.9 297 71.7
TPR.G24478 Trifolium pratense HOM05D005754 ORTHO05D006843 8.3e-109 397.5 297 71.4
Haze_05263 Corylus avellana HOM05D005754 ORTHO05D006843 1.8e-108 396.4 303 71.0
Cfa001129 Carpinus fangiana HOM05D005754 ORTHO05D006843 3.2e-108 395.6 304 70.7
COL.COLO4_15977 Corchorus olitorius HOM05D005754 ORTHO05D006843 4.1e-108 395.2 297 70.7
Ca_04011_v3 Cicer arietinum L. HOM05D005754 ORTHO05D006843 1.2e-107 393.7 297 70.4
TPR.G21775 Trifolium pratense HOM05D005754 ORTHO05D006843 2.7e-107 392.5 297 70.4
Lalb_Chr17g0344101 Lupinus albus HOM05D005754 ORTHO05D006843 7.8e-107 391.0 297 69.4
Medtr3g077990 Medicago truncatula HOM05D005754 ORTHO05D006843 7.8e-107 391.0 297 70.0
Lj3g0027197 Lotus japonicus HOM05D005754 ORTHO05D006843 2.3e-106 389.4 297 69.4
Cpa.g.sc17.6 Carica papaya HOM05D005754 ORTHO05D006843 3.0e-106 389.0 297 69.0
Manes.16G050000 Manihot esculenta HOM05D005754 ORTHO05D006843 6.6e-106 387.9 298 69.8
Ciclev10016094m.g Citrus clementina HOM05D005754 ORTHO05D006843 8.6e-106 387.5 301 67.4
TWI74G1242 Tripterygium wilfordii HOM05D005754 ORTHO05D006843 1.1e-105 387.1 301 68.4
CARHR129140 Cardamine hirsuta HOM05D005754 ORTHO05D006843 3.3e-105 385.6 293 71.7
Glyma.12G019600 Glycine max HOM05D005754 ORTHO05D006843 1.6e-104 383.3 297 68.7
Prupe.8G016600 Prunus persica HOM05D005754 ORTHO05D006843 4.7e-104 381.7 295 69.8
MD05G1011700 Malus domestica HOM05D005754 ORTHO05D006843 6.2e-104 381.3 295 69.2
VMungo1127G0046 Vigna mungo HOM05D005754 ORTHO05D006843 6.2e-104 381.3 297 68.0
Thhalv10016993m.g Eutrema salsugineum HOM05D005754 ORTHO05D006843 1.1e-103 380.6 293 70.3
TWI53G2110 Tripterygium wilfordii HOM05D005754 ORTHO05D006843 1.1e-103 380.6 297 68.7
MD12G1011000 Malus domestica HOM05D005754 ORTHO05D006843 2.3e-103 379.4 298 67.1
PSO801G0209 Papaver somniferum HOM05D005754 ORTHO05D006843 3.1e-103 379.0 295 68.5
Potri.001G160600 Populus trichocarpa HOM05D005754 ORTHO05D006843 3.1e-103 379.0 297 67.7
RcHm_v2.0_Chr6g0277521 Rosa chinensis HOM05D005754 ORTHO05D006843 3.1e-103 379.0 296 69.3
Gorai.006G250700 Gossypium raimondii HOM05D005754 ORTHO05D006843 4.0e-103 378.6 297 68.7
AT2G34980 Arabidopsis thaliana HOM05D005754 ORTHO05D006843 5.2e-103 378.3 292 70.2
Gohir.D09G228000 Gossypium hirsutum HOM05D005754 ORTHO05D006843 5.2e-103 378.3 297 68.7
Atru.chr10.361 Acer truncatum HOM05D005754 ORTHO05D006843 8.9e-103 377.5 290 68.6
THA.LOC104798565 Tarenaya hassleriana HOM05D005754 ORTHO05D006843 1.2e-102 377.1 298 68.5
Potri.003G074300 Populus trichocarpa HOM05D005754 ORTHO05D006843 3.4e-102 375.6 297 67.3
Gohir.A09G227000 Gossypium hirsutum HOM05D005754 ORTHO05D006843 4.4e-102 375.2 297 68.4
Prupe.7G012900 Prunus persica HOM05D005754 ORTHO05D006843 4.4e-102 375.2 298 66.4
BraA05t20016Z Brassica rapa HOM05D005754 ORTHO05D006843 5.8e-102 374.8 293 68.3
C04p13810 Brassica napus HOM05D005754 ORTHO05D006843 7.5e-102 374.4 301 68.1
BolC4t22971H Brassica oleracea HOM05D005754 ORTHO05D006843 9.8e-102 374.0 293 68.9
Dinv31187 Davidia involucrata HOM05D005754 ORTHO05D006843 9.8e-102 374.0 272 73.2
Sabra03G0045000 Salix brachista HOM05D005754 ORTHO05D006843 9.8e-102 374.0 297 67.3
BcaB02g09492 Brassica carinata HOM05D005754 ORTHO05D006843 1.3e-101 373.6 292 68.8
Aa31LG9G16220 Aethionema arabicum HOM05D005754 ORTHO05D006843 1.7e-101 373.2 296 68.9
RcHm_v2.0_Chr3g0496061 Rosa chinensis HOM05D005754 ORTHO05D006843 6.4e-101 371.3 298 66.8
A05p10720 Brassica napus HOM05D005754 ORTHO05D006843 1.1e-100 370.5 293 67.9
MELO3C021702.2 Cucumis melo HOM05D005754 ORTHO05D006843 1.1e-100 370.5 297 67.0
Carub.0004s1667 Capsella rubella HOM05D005754 ORTHO05D006843 1.9e-100 369.8 293 69.3
PSO339G5576 Papaver somniferum HOM05D005754 ORTHO05D006843 1.9e-100 369.8 294 67.3
FAN24G3472 Fragaria x ananassa HOM05D005754 ORTHO05D006843 3.2e-100 369.0 298 67.4
TAR636G0743 Trochodendron aralioides HOM05D005754 ORTHO05D006843 7.0e-100 367.9 297 67.0
TAR636G1551 Trochodendron aralioides HOM05D005754 ORTHO05D006843 7.0e-100 367.9 297 67.0
FvH4_1g22930 Fragaria vesca HOM05D005754 ORTHO05D006843 9.2e-100 367.5 298 67.1
Nn2g13637 Nelumbo nucifera HOM05D005754 ORTHO05D006843 9.2e-100 367.5 293 67.2
Nn2g13638 Nelumbo nucifera HOM05D005754 ORTHO05D006843 9.2e-100 367.5 293 67.2
FAN28G1898 Fragaria x ananassa HOM05D005754 ORTHO05D006843 1.2e-99 367.1 298 66.8
AL4G30990 Arabidopsis lyrata HOM05D005754 ORTHO05D006843 1.6e-99 366.7 293 69.6
FvH4_2g14913 Fragaria vesca HOM05D005754 ORTHO05D006843 1.6e-99 366.7 298 67.1
arahy.Tifrunner.gnm1.ann1.RJAX1V Arachis hypogaea HOM05D005754 ORTHO05D006843 2.0e-99 366.3 298 65.8
Aqoxy2G00957 Aquilegia oxysepala HOM05D005754 ORTHO05D006843 1.0e-98 364.0 300 65.3
Sed0006244 Sechium edule HOM05D005754 ORTHO05D006843 1.0e-98 364.0 299 66.6
arahy.Tifrunner.gnm1.ann1.9I9HCV Arachis hypogaea HOM05D005754 ORTHO05D006843 3.9e-98 362.1 298 65.4
ClCG01G009960 Citrullus lanatus HOM05D005754 ORTHO05D006843 3.9e-98 362.1 297 66.0
CSS0030019 Camellia sinensis var. sinensis HOM05D005754 ORTHO05D006843 8.6e-98 360.9 297 66.0
BcaB02g09491 Brassica carinata HOM05D005754 ORTHO05D006843 1.1e-97 360.5 299 66.2
TAR633G0926 Trochodendron aralioides HOM05D005754 ORTHO05D006843 1.6e-96 356.7 297 66.0
Oeu063995.1 Olea europaea HOM05D005754 ORTHO05D006843 5.2e-95 351.7 296 64.2
BcaC02g07743 Brassica carinata HOM05D004145 ORTHO05D006843 8.9e-95 350.9 289 67.8
vmacro03555 Vaccinium macrocarpon HOM05D005754 ORTHO05D006843 8.9e-95 350.9 298 63.1
Cc09_g05360 Coffea canephora HOM05D005754 ORTHO05D006843 3.4e-94 349.0 297 62.3
Nitab4.5_0006933g0010 Nicotiana tabacum HOM05D005754 ORTHO05D006843 3.7e-93 345.5 297 62.3
Sopen02g026230 Solanum pennellii HOM05D005754 ORTHO05D006843 3.7e-93 345.5 297 62.3
PGSC0003DMG400017743 Solanum tuberosum HOM05D005754 ORTHO05D006843 3.7e-93 345.5 297 62.3
Nitab4.5_0006976g0040 Nicotiana tabacum HOM05D005754 ORTHO05D006843 4.9e-93 345.1 297 62.3
Rhsim08G0028000 Rhododendron simsii HOM05D005754 ORTHO05D006843 4.9e-93 345.1 298 63.1
CAN.G809.72 Capsicum annuum HOM05D005754 ORTHO05D006843 8.3e-93 344.4 296 62.5
ATR0618G331 Amborella trichopoda HOM05D005754 ORTHO05D006843 1.4e-92 343.6 295 63.1
Solyc02g081610.3 Solanum lycopersicum HOM05D005754 ORTHO05D006843 1.4e-92 343.6 297 62.0
Zm00001eb185080 Zea mays HOM05D005754 ORTHO05D006843 2.4e-92 342.8 297 63.6
Os02g0622200 Oryza sativa ssp. japonica HOM05D005754 ORTHO05D006843 7.1e-92 341.3 296 63.9
FAN19G0110 Fragaria x ananassa HOM05D005754 ORTHO05D006843 1.2e-91 340.5 281 66.9
PGSC0003DMG400024410 Solanum tuberosum HOM05D005754 ORTHO05D006843 2.1e-91 339.7 297 61.6
Rhsim02G0117500 Rhododendron simsii HOM05D005754 ORTHO05D006843 1.7e-90 336.7 298 61.4
SalBow5G0150 Salvia bowleyana HOM05D005754 ORTHO05D006843 3.0e-90 335.9 298 61.1
MSTRG.26599 Avicennia marina HOM05D005754 ORTHO05D006843 3.9e-90 335.5 297 61.6
Sc15g0000060 Simmondsia chinensis HOM05D005754 ORTHO05D006843 7.3e-89 331.3 290 61.0
HanXRQChr04g0115041 Helianthus annuus HOM05D005754 ORTHO05D006843 1.2e-88 330.5 281 63.3
SHI51133 Sapria himalayana HOM05D005754 ORTHO05D006843 2.1e-88 329.7 302 58.9
FAN26G0490 Fragaria x ananassa HOM05D005754 ORTHO05D006843 2.8e-88 329.3 281 65.5
DCAR_002228 Daucus carota HOM05D005754 ORTHO05D006843 1.8e-87 326.6 298 59.1
EL10Ac9g21106 Beta vulgaris HOM05D005754 ORTHO05D006843 6.8e-87 324.7 298 59.4
Ah.01g016960 Amaranthus hybridus HOM05D005754 ORTHO05D006843 1.2e-86 323.9 298 59.4
AUR62038334 Chenopodium quinoa HOM05D005754 ORTHO05D006843 4.9e-85 318.5 298 57.7
unitig_747.g21312 Utricularia gibba HOM05D005754 ORTHO05D006843 4.9e-85 318.5 297 57.6
Migut.H00867 Erythranthe guttata HOM05D005754 ORTHO05D006843 2.4e-84 316.2 291 60.1
Lj2P343T23 Lonicera japonica HOM05D005754 ORTHO05D006843 2.4e-84 316.2 281 62.6
Lsat_1_v5_gn_5_184141 Lactuca sativa HOM05D005754 ORTHO05D006843 3.2e-84 315.8 292 59.6
SEGI_24883 Sequoiadendron giganteum HOM05D005754 ORTHO05D006843 1.2e-83 313.9 302 56.6
SGA_v2.0_scaffold184G40027 Striga asiatica HOM05D005754 ORTHO05D006843 2.3e-82 309.7 296 58.4
Psat4g130160 Pisum sativum HOM05D005754 ORTHO05D006843 5.1e-82 308.5 209 77.0
SHI47983 Sapria himalayana HOM05D005754 ORTHO05D006843 1.5e-78 297.0 255 62.4
AUR62023912 Chenopodium quinoa HOM05D005754 ORTHO05D006843 1.7e-77 293.5 281 56.9
HPP92_025694 Vanilla planifolia HOM05D005754 ORTHO05D006843 4.9e-77 292.0 290 55.5
Lsat_1_v5_gn_2_60361 Lactuca sativa HOM05D005754 ORTHO05D006843 6.6e-74 281.6 273 58.2
FAN27G3249 Fragaria x ananassa HOM05D005754 ORTHO05D006843 2.6e-70 269.6 198 71.7
Pp3c1_31960 Physcomitrium patens HOM05D005754 ORTHO05D006843 8.4e-69 264.6 306 52.0
AagrBONN_evm.TU.Sc2ySwM_368.2727 Anthoceros agrestis HOM05D005754 ORTHO05D006843 6.4e-61 238.4 295 47.5
QL06p000087 Quercus lobata HOM05D005754 ORTHO05D006843 1.1e-60 237.7 289 50.9
Phvul.011G021750 Phaseolus vulgaris HOM05D005754 ORTHO05D006843 2.1e-59 233.4 195 64.6
SMO174G0201 Selaginella moellendorffii HOM05D005754 ORTHO05D006843 5.1e-58 228.8 292 46.9
Atru.chr10.357 Acer truncatum HOM05D005754 ORTHO05D006843 1.1e-57 227.6 161 70.8
AUR62040653 Chenopodium quinoa HOM05D002008 ORTHO05D006843 1.9e-57 226.9 195 63.1
SEGI_06024 Sequoiadendron giganteum HOM05D005754 ORTHO05D006843 3.4e-54 216.1 194 59.3
Mapoly0096s0067 Marchantia polymorpha HOM05D005754 ORTHO05D006843 4.2e-52 209.1 338 41.4
GSVIVG01012143001 Vitis vinifera HOM05D005754 ORTHO05D006843 2.4e-47 193.4 159 66.0
Psat4g130000 Pisum sativum HOM05D005754 ORTHO05D006843 2.6e-46 189.9 240 51.7
ECA238G2846 Erigeron canadensis HOM05D005754 ORTHO05D006843 1.4e-44 184.1 135 69.6
Psat7g123440 Pisum sativum HOM05D005754 ORTHO05D006843 1.4e-39 167.5 161 58.4
ClCG01G008540 Citrullus lanatus HOM05D005754 ORTHO05D006843 1.8e-39 167.2 292 40.4
Phvul.011G022000 Phaseolus vulgaris HOM05D005754 ORTHO05D006843 1.9e-36 157.1 139 61.9
TPR.G29739 Trifolium pratense HOM05D005754 ORTHO05D006843 2.7e-35 153.3 115 72.2
Peaxi162Scf00048g00146 Petunia axillaris HOM05D005754 ORTHO05D006843 3.9e-34 149.4 197 46.7
Sp2g07050 Schrenkiella parvula HOM05D005754 ORTHO05D006843 8.8e-34 148.3 102 74.5
Nitab4.5_0011913g0010 Nicotiana tabacum HOM05D005754 ORTHO05D006843 1.3e-29 134.4 92 71.7
FAN15G0194 Fragaria x ananassa HOM05D005754 ORTHO05D006843 1.9e-28 130.6 95 72.6
CBR_g21245 Chara braunii HOM05D005754 ORTHO05D006843 1.2e-22 111.3 168 39.9
CSS0033773 Camellia sinensis var. sinensis HOM05D005754 ORTHO05D006843 3.8e-21 106.3 161 44.1
Cre02.g109850 Chlamydomonas reinhardtii HOM05D005754 ORTHO05D006843 1.7e-16 90.9 291 28.2
MCO15G034 Micromonas commoda HOM05D005754 ORTHO05D006843 6.3e-16 89.0 304 27.6
Psat4g159400 Pisum sativum HOM05D003463 ORTHO05D004846 4.1e-15 86.3 125 43.2
CARHR278340 Cardamine hirsuta HOM05D005754 ORTHO05D006843 1.6e-14 84.3 62 72.6
Hund00745 Selenicereus undatus HOM05D005754 ORTHO05D006843 2.0e-14 84.0 48 81.2
CsaV3_1G018460 Cucumis sativus L. HOM05D001859 ORTHO05D001836 2.2e-13 80.5 43 79.1
Medtr3g464840 Medicago truncatula HOM05D000092 ORTHO05D005910 4.2e-12 76.3 66 65.2
BcaB06g28814 Brassica carinata HOM05D005754 ORTHO05D006843 3.0e-10 70.1 170 31.8
Cfa024382 Carpinus fangiana HOM05D005754 ORTHO05D006843 3.7e-08 63.2 191 29.3


User provided reference genes

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