Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.G02613 Eucalyptus grandis HOM05D007154 ORTHO05D008945 9.4e-81 303.5 159 100.0
Cfa018670 Carpinus fangiana HOM05D007154 ORTHO05D008945 2.3e-50 202.6 166 68.7
Manes.04G160900 Manihot esculenta HOM05D007154 ORTHO05D008945 2.9e-50 202.2 159 69.8
Prupe.1G351600 Prunus persica HOM05D007154 ORTHO05D008945 1.1e-49 200.3 159 70.4
TWI53G1167 Tripterygium wilfordii HOM05D007154 ORTHO05D008945 9.5e-49 197.2 159 67.9
CANSAT78G1733 Cannabis sativa HOM05D007154 ORTHO05D008945 3.6e-48 195.3 164 67.7
Potri.010G254600 Populus trichocarpa HOM05D007154 ORTHO05D008945 3.6e-48 195.3 159 67.9
Dinv01916 Davidia involucrata HOM05D007154 ORTHO05D008945 1.0e-47 193.7 160 66.2
Thecc.02G152200 Theobroma cacao HOM05D007154 ORTHO05D008945 6.8e-47 191.0 159 66.0
Sabra10G0198000 Salix brachista HOM05D007154 ORTHO05D008945 8.9e-47 190.7 159 67.9
CSS0036440 Camellia sinensis var. sinensis HOM05D007154 ORTHO05D008945 2.6e-46 189.1 159 65.4
Ciclev10016869m.g Citrus clementina HOM05D007154 ORTHO05D008945 3.4e-46 188.7 159 66.7
COL.COLO4_33150 Corchorus olitorius HOM05D007154 ORTHO05D008945 1.3e-45 186.8 159 65.4
CAN.G419.16 Capsicum annuum HOM05D007154 ORTHO05D008945 3.7e-45 185.3 164 63.4
GSVIVG01034352001 Vitis vinifera HOM05D007154 ORTHO05D008945 3.7e-45 185.3 131 72.5
Sed0008143 Sechium edule HOM05D007154 ORTHO05D008945 8.3e-45 184.1 162 64.2
Atru.chr11.40 Acer truncatum HOM05D007154 ORTHO05D008945 1.1e-44 183.7 152 68.4
QL01p000323 Quercus lobata HOM05D007154 ORTHO05D008945 1.1e-44 183.7 150 66.7
Ah.10g037940 Amaranthus hybridus HOM05D007154 ORTHO05D008945 1.4e-44 183.3 157 61.1
MD13G1001100 Malus domestica HOM05D007154 ORTHO05D008945 1.4e-44 183.3 159 67.9
Gorai.012G136600 Gossypium raimondii HOM05D007154 ORTHO05D008945 2.4e-44 182.6 157 66.2
RcHm_v2.0_Chr4g0447181 Rosa chinensis HOM05D007154 ORTHO05D008945 2.4e-44 182.6 159 64.2
Gohir.D04G150000 Gossypium hirsutum HOM05D007154 ORTHO05D008945 4.1e-44 181.8 157 66.2
Oeu019256.1 Olea europaea HOM05D007154 ORTHO05D008945 1.6e-43 179.9 158 67.1
MELO3C005082.2 Cucumis melo HOM05D007154 ORTHO05D008945 2.7e-43 179.1 161 62.7
Solyc04g008770.3 Solanum lycopersicum HOM05D007154 ORTHO05D008945 3.5e-43 178.7 159 63.5
Sopen04g003950 Solanum pennellii HOM05D007154 ORTHO05D008945 3.5e-43 178.7 159 63.5
PGSC0003DMG400025308 Solanum tuberosum HOM05D007154 ORTHO05D008945 3.5e-43 178.7 157 65.0
EL10Ac2g04490 Beta vulgaris HOM05D007154 ORTHO05D008945 7.8e-43 177.6 159 61.6
ClCG01G007940 Citrullus lanatus HOM05D007154 ORTHO05D008945 1.0e-42 177.2 165 62.4
Lalb_Chr01g0013651 Lupinus albus HOM05D007154 ORTHO05D008945 1.3e-42 176.8 161 59.6
SalBow4G2238 Salvia bowleyana HOM05D007154 ORTHO05D008945 1.7e-42 176.4 153 66.7
DCAR_030346 Daucus carota HOM05D007154 ORTHO05D008945 2.3e-42 176.0 151 66.2
PGR142G2984 Punica granatum HOM05D007154 ORTHO05D008945 3.0e-42 175.6 108 77.8
Peaxi162Scf00329g00212 Petunia axillaris HOM05D007154 ORTHO05D008945 3.9e-42 175.3 164 62.8
CsaV3_5G021910 Cucumis sativus L. HOM05D007154 ORTHO05D008945 5.0e-42 174.9 165 63.0
Nitab4.5_0011708g0010 Nicotiana tabacum HOM05D007154 ORTHO05D008945 6.6e-42 174.5 122 73.0
AL6G34660 Arabidopsis lyrata HOM05D007154 ORTHO05D008945 8.6e-42 174.1 138 68.8
Nitab4.5_0007445g0030 Nicotiana tabacum HOM05D007154 ORTHO05D008945 8.6e-42 174.1 122 72.1
Sp2g23770 Schrenkiella parvula HOM05D007154 ORTHO05D008945 1.9e-41 172.9 126 69.8
Gohir.A04G109800 Gossypium hirsutum HOM05D007154 ORTHO05D008945 2.5e-41 172.6 157 63.1
Actinidia04367 Actinidia chinensis HOM05D007154 ORTHO05D008945 3.3e-41 172.2 159 59.7
Lj3g0022846 Lotus japonicus HOM05D007154 ORTHO05D008945 4.3e-41 171.8 130 64.6
Aa31LG11G2830 Aethionema arabicum HOM05D007154 ORTHO05D008945 7.3e-41 171.0 163 62.6
Nitab4.5_0002707g0010 Nicotiana tabacum HOM05D007154 ORTHO05D008945 7.3e-41 171.0 122 70.5
THA.LOC104800635 Tarenaya hassleriana HOM05D007154 ORTHO05D008945 7.3e-41 171.0 169 63.3
arahy.Tifrunner.gnm1.ann1.408I3G Arachis hypogaea HOM05D007154 ORTHO05D008945 9.5e-41 170.6 125 68.8
FAN17G3039 Fragaria x ananassa HOM05D007154 ORTHO05D008945 9.5e-41 170.6 159 62.3
Ca_23384_v3 Cicer arietinum L. HOM05D007154 ORTHO05D008945 1.2e-40 170.2 159 60.4
Glyma.07G039300 Glycine max HOM05D007154 ORTHO05D008945 1.2e-40 170.2 159 57.2
Nn3g18537 Nelumbo nucifera HOM05D007154 ORTHO05D008945 1.2e-40 170.2 151 63.6
AT5G23395 Arabidopsis thaliana HOM05D007154 ORTHO05D008945 2.1e-40 169.5 163 60.1
A06p34370 Brassica napus HOM05D007154 ORTHO05D008945 3.6e-40 168.7 165 58.8
BraA06t26367Z Brassica rapa HOM05D007154 ORTHO05D008945 3.6e-40 168.7 165 58.8
CiPaw.16G000700 Carya illinoinensis HOM05D007154 ORTHO05D008945 3.6e-40 168.7 159 62.9
Thhalv10005037m.g Eutrema salsugineum HOM05D007154 ORTHO05D008945 3.6e-40 168.7 168 58.9
FAN07G0022 Fragaria x ananassa HOM05D007154 ORTHO05D008945 3.6e-40 168.7 159 61.0
Lsat_1_v5_gn_9_117140 Lactuca sativa HOM05D007154 ORTHO05D008945 8.1e-40 167.5 124 68.5
Psat4g220160 Pisum sativum HOM05D007154 ORTHO05D008945 8.1e-40 167.5 116 70.7
arahy.Tifrunner.gnm1.ann1.JHQS48 Arachis hypogaea HOM05D007154 ORTHO05D008945 1.1e-39 167.2 125 68.0
TAR371G0017 Trochodendron aralioides HOM05D007154 ORTHO05D008945 1.8e-39 166.4 150 60.7
HanXRQChr13g0420721 Helianthus annuus HOM05D007154 ORTHO05D008945 2.3e-39 166.0 123 67.5
Sc10g0006590 Simmondsia chinensis HOM05D007154 ORTHO05D008945 2.3e-39 166.0 159 56.6
Haze_17398 Corylus avellana HOM05D007154 ORTHO05D008945 3.1e-39 165.6 159 61.0
PSO063G0981 Papaver somniferum HOM05D007154 ORTHO05D008945 1.2e-38 163.7 153 56.9
PSO782G0712 Papaver somniferum HOM05D007154 ORTHO05D008945 1.2e-38 163.7 153 56.9
vmacro16164 Vaccinium macrocarpon HOM05D007154 ORTHO05D008945 1.2e-38 163.7 138 61.6
C07p44160 Brassica napus HOM05D007154 ORTHO05D008945 1.5e-38 163.3 165 57.6
BolC7t44940H Brassica oleracea HOM05D007154 ORTHO05D008945 1.5e-38 163.3 165 57.6
Carub.0006s2118 Capsella rubella HOM05D007154 ORTHO05D008945 1.5e-38 163.3 168 57.7
Rhsim07G0213000 Rhododendron simsii HOM05D000003 ORTHO05D008945 4.4e-38 161.8 180 53.9
VMungo0331G0746 Vigna mungo HOM05D007154 ORTHO05D008945 5.8e-38 161.4 159 55.3
Lj3C844G3 Lonicera japonica HOM05D007154 ORTHO05D008945 7.5e-38 161.0 130 64.6
AUR62023198 Chenopodium quinoa HOM05D007154 ORTHO05D008945 9.8e-38 160.6 159 58.5
Phvul.010G129500 Phaseolus vulgaris HOM05D007154 ORTHO05D008945 9.8e-38 160.6 124 64.5
Medtr8g020800 Medicago truncatula HOM05D007154 ORTHO05D008945 1.7e-37 159.8 159 56.0
Cc00_g03880 Coffea canephora HOM05D007154 ORTHO05D008945 2.9e-37 159.1 163 55.8
Migut.B01210 Erythranthe guttata HOM05D007154 ORTHO05D008945 3.7e-37 158.7 160 58.8
AUR62023245 Chenopodium quinoa HOM05D007154 ORTHO05D008945 3.2e-36 155.6 158 58.2
TPR.G36620 Trifolium pratense HOM05D007154 ORTHO05D008945 9.2e-36 154.1 151 57.0
ECA240G2562 Erigeron canadensis HOM05D007154 ORTHO05D008945 1.2e-35 153.7 160 53.1
Aqoxy3G04335 Aquilegia oxysepala HOM05D007154 ORTHO05D008945 4.6e-35 151.8 150 57.3
CDE04G0025 Ceratophyllum demersum HOM05D007154 ORTHO05D008945 6.0e-35 151.4 144 58.3
FvH4_4g37330 Fragaria vesca HOM05D007154 ORTHO05D008945 3.0e-34 149.1 105 70.5
Hund16199 Selenicereus undatus HOM05D007154 ORTHO05D008945 3.0e-34 149.1 160 54.4
ATR0124G040 Amborella trichopoda HOM05D007154 ORTHO05D008945 1.9e-33 146.4 149 54.4
BcaNung03727 Brassica carinata HOM05D007154 ORTHO05D008945 5.6e-33 144.8 133 61.7
Glyma.16G008100 Glycine max HOM05D007154 ORTHO05D008945 2.8e-32 142.5 88 75.0
SGA_v2.0_scaffold166G38315 Striga asiatica HOM05D007154 ORTHO05D008945 3.6e-32 142.1 127 60.6
HPP92_003488 Vanilla planifolia HOM05D007154 ORTHO05D008945 6.2e-32 141.4 155 55.5
HPP92_026886 Vanilla planifolia HOM05D007154 ORTHO05D008945 1.8e-31 139.8 124 60.5
CARHR190110 Cardamine hirsuta HOM05D007154 ORTHO05D008945 3.1e-31 139.0 98 68.4
Os04g0527700 Oryza sativa ssp. japonica HOM05D007154 ORTHO05D008945 5.2e-31 138.3 155 51.0
Duzib248G1404 Durio zibethinus HOM05D007154 ORTHO05D008945 4.4e-30 135.2 112 66.1
SGA_v2.0_scaffold249G44952 Striga asiatica HOM05D007154 ORTHO05D008945 1.7e-29 133.3 127 58.3
Zm00001eb427080 Zea mays HOM05D007154 ORTHO05D008945 3.7e-29 132.1 118 53.4
Cpa.g.sc221.16 Carica papaya HOM05D007154 ORTHO05D008945 4.9e-29 131.7 106 61.3
TAR371G0737 Trochodendron aralioides HOM05D007154 ORTHO05D008945 6.4e-29 131.3 118 57.6
Zm00001eb076710 Zea mays HOM05D007154 ORTHO05D008945 2.4e-28 129.4 102 57.8
unitig_61.g26453 Utricularia gibba HOM05D007154 ORTHO05D008945 7.3e-25 117.9 129 53.5
SHI21164 Sapria himalayana HOM05D007154 ORTHO05D008945 9.6e-25 117.5 149 49.7
TAR627G0850 Trochodendron aralioides HOM05D007154 ORTHO05D008945 1.8e-23 113.2 107 55.1
Oeu037446.1 Olea europaea HOM05D007154 ORTHO05D008945 3.8e-21 105.5 82 64.6
TAR622G0969 Trochodendron aralioides HOM05D007154 ORTHO05D008945 4.2e-20 102.1 104 52.9
Duzib051G0001 Durio zibethinus HOM05D007154 ORTHO05D008945 3.0e-18 95.9 96 62.5
Pp3c11_17450 Physcomitrium patens HOM05D007154 ORTHO05D008945 1.1e-15 87.4 100 46.0
AagrBONN_evm.TU.Sc2ySwM_362.2201 Anthoceros agrestis HOM05D007154 ORTHO05D008945 7.9e-11 71.2 76 47.4
SEGI_35140 Sequoiadendron giganteum HOM05D007154 ORTHO05D008945 3.0e-10 69.3 59 55.9
Mapoly0093s0036 Marchantia polymorpha HOM05D007154 ORTHO05D008945 3.9e-10 68.9 116 37.1
MCO07G261 Micromonas commoda HOM05D007154 ORTHO05D008945 4.8e-08 62.0 99 33.3


User provided reference genes

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