Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.G02484 Eucalyptus grandis HOM05D006399 ORTHO05D007988 8.5e-298 1026.2 493 100.0
QL03p069077 Quercus lobata HOM05D006399 ORTHO05D007988 1.3e-189 666.8 486 68.1
QL93p1999_0143 Quercus lobata HOM05D006399 ORTHO05D007988 1.3e-189 666.8 486 68.1
Haze_11971 Corylus avellana HOM05D006399 ORTHO05D007988 6.1e-187 657.9 486 66.7
Cfa008945 Carpinus fangiana HOM05D006399 ORTHO05D007988 2.0e-185 652.9 460 68.7
CiPaw.06G087600 Carya illinoinensis HOM05D006399 ORTHO05D007988 2.6e-182 642.5 493 64.7
QL12p039367 Quercus lobata HOM05D006399 ORTHO05D007988 3.7e-176 622.1 463 66.3
QL12p039232 Quercus lobata HOM05D006399 ORTHO05D007988 9.8e-169 597.4 471 64.3
GSVIVG01005154001 Vitis vinifera HOM05D006399 ORTHO05D007988 1.7e-165 586.6 490 60.6
Atru.chr11.1742 Acer truncatum HOM05D006399 ORTHO05D007988 4.7e-163 578.6 496 61.3
RcHm_v2.0_Chr4g0439361 Rosa chinensis HOM05D006399 ORTHO05D007988 5.7e-161 571.6 493 60.2
FAN07G2088 Fragaria x ananassa HOM05D006399 ORTHO05D007988 9.8e-161 570.9 495 61.4
FvH4_4g30990 Fragaria vesca HOM05D006399 ORTHO05D007988 3.7e-160 568.9 495 61.0
FAN12G2051 Fragaria x ananassa HOM05D006399 ORTHO05D007988 4.1e-159 565.5 495 60.8
FAN22G0994 Fragaria x ananassa HOM05D006399 ORTHO05D007988 1.2e-158 563.9 493 60.4
TAR622G1196 Trochodendron aralioides HOM05D006399 ORTHO05D007988 5.9e-158 561.6 492 58.3
Dinv07949 Davidia involucrata HOM05D006399 ORTHO05D007988 1.0e-157 560.8 490 60.8
Dinv34129 Davidia involucrata HOM05D006399 ORTHO05D007988 1.1e-156 557.4 498 57.4
Dinv34130 Davidia involucrata HOM05D006399 ORTHO05D007988 1.1e-156 557.4 481 61.1
PGR102G2002 Punica granatum HOM05D006399 ORTHO05D007988 1.5e-156 557.0 422 65.2
CSS0044828 Camellia sinensis var. sinensis HOM05D006399 ORTHO05D007988 1.5e-153 547.0 457 61.5
Nn3g17286 Nelumbo nucifera HOM05D006399 ORTHO05D007988 1.5e-153 547.0 498 58.6
Nn3g17302 Nelumbo nucifera HOM05D006399 ORTHO05D007988 1.5e-153 547.0 498 58.6
CiPaw.05G130700 Carya illinoinensis HOM05D006399 ORTHO05D007988 2.4e-151 539.7 504 57.3
Manes.01G033900 Manihot esculenta HOM05D006399 ORTHO05D007988 1.7e-149 533.5 480 57.7
Haze_11970 Corylus avellana HOM05D006399 ORTHO05D007988 2.3e-149 533.1 509 56.0
CSS0033869 Camellia sinensis var. sinensis HOM05D006399 ORTHO05D007988 1.9e-148 530.0 497 54.3
Potri.008G089800 Populus trichocarpa HOM05D006399 ORTHO05D007988 7.3e-148 528.1 504 55.2
Cfa008944 Carpinus fangiana HOM05D006399 ORTHO05D007988 4.7e-147 525.4 505 55.0
CiPaw.05G130800 Carya illinoinensis HOM05D006399 ORTHO05D007988 4.4e-145 518.8 490 55.9
Thecc.02G341500 Theobroma cacao HOM05D006399 ORTHO05D007988 4.4e-145 518.8 456 55.9
Oeu005762.1 Olea europaea HOM05D006399 ORTHO05D007988 1.7e-144 516.9 454 57.0
Sabra08G0067200 Salix brachista HOM05D006399 ORTHO05D007988 6.4e-144 515.0 503 54.3
Duzib248G1019 Durio zibethinus HOM05D006399 ORTHO05D007988 1.1e-143 514.2 499 53.1
Manes.05G105200 Manihot esculenta HOM05D006399 ORTHO05D007988 5.4e-143 511.9 499 53.1
Aqoxy3G00634 Aquilegia oxysepala HOM05D006399 ORTHO05D007988 7.0e-143 511.5 465 55.9
Actinidia17748 Actinidia chinensis HOM05D006399 ORTHO05D007988 1.2e-142 510.8 494 53.8
CANSAT64G0537 Cannabis sativa HOM05D006399 ORTHO05D007988 2.7e-142 509.6 496 55.8
Gorai.013G088500 Gossypium raimondii HOM05D006399 ORTHO05D007988 3.5e-142 509.2 504 53.0
MD16G1068900 Malus domestica HOM05D006399 ORTHO05D007988 1.0e-141 507.7 510 54.1
Phvul.003G046500 Phaseolus vulgaris HOM05D006399 ORTHO05D007988 1.7e-141 506.9 451 57.4
RcHm_v2.0_Chr4g0439341 Rosa chinensis HOM05D006399 ORTHO05D007988 1.7e-141 506.9 510 53.3
Glyma.02G110300 Glycine max HOM05D006399 ORTHO05D007988 3.0e-141 506.1 472 55.7
Gohir.D13G077400 Gossypium hirsutum HOM05D006399 ORTHO05D007988 3.0e-141 506.1 504 52.8
Prupe.1G278300 Prunus persica HOM05D006399 ORTHO05D007988 3.9e-141 505.8 517 55.7
Cc00_g16610 Coffea canephora HOM05D006399 ORTHO05D007988 6.6e-141 505.0 497 51.9
DCAR_007171 Daucus carota HOM05D006399 ORTHO05D007988 1.5e-140 503.8 451 56.1
FAN07G1460 Fragaria x ananassa HOM05D006399 ORTHO05D007988 1.5e-140 503.8 510 53.1
FvH4_4g30980 Fragaria vesca HOM05D006399 ORTHO05D007988 2.5e-140 503.1 458 56.8
Lalb_Chr04g0255911 Lupinus albus HOM05D006399 ORTHO05D007988 2.5e-140 503.1 486 54.7
Rhsim12G0079500 Rhododendron simsii HOM05D006399 ORTHO05D007988 4.3e-140 502.3 494 54.3
FAN12G0639 Fragaria x ananassa HOM05D006399 ORTHO05D007988 5.6e-140 501.9 507 53.5
Lj2g0004295 Lotus japonicus HOM05D006399 ORTHO05D007988 7.3e-140 501.5 507 52.3
Glyma.01G052300 Glycine max HOM05D006399 ORTHO05D007988 9.5e-140 501.1 390 62.6
Cpa.g.sc1.57 Carica papaya HOM05D006399 ORTHO05D007988 2.1e-139 500.0 505 53.3
PSO210G1214 Papaver somniferum HOM05D006399 ORTHO05D007988 1.2e-137 494.2 423 58.6
Psat2g116280 Pisum sativum HOM05D006399 ORTHO05D007988 1.2e-137 494.2 377 62.3
Atru.chr11.1740 Acer truncatum HOM05D006399 ORTHO05D007988 5.8e-137 491.9 507 51.9
Actinidia31971 Actinidia chinensis HOM05D006399 ORTHO05D007988 9.9e-137 491.1 483 51.6
VMungo1215G0113 Vigna mungo HOM05D006399 ORTHO05D007988 3.7e-136 489.2 448 55.6
Medtr5g042100 Medicago truncatula HOM05D006399 ORTHO05D007988 1.1e-135 487.6 375 61.6
Ca_04827_v3 Cicer arietinum L. HOM05D006399 ORTHO05D007988 9.2e-135 484.6 373 61.9
Nitab4.5_0000145g0020 Nicotiana tabacum HOM05D006399 ORTHO05D007988 1.0e-133 481.1 448 55.4
TPR.G34705 Trifolium pratense HOM05D006399 ORTHO05D007988 2.3e-133 479.9 481 52.0
Eucgr.B03205 Eucalyptus grandis HOM05D006399 ORTHO05D007988 3.3e-132 476.1 485 52.2
EL10Ac6g13248 Beta vulgaris HOM05D006399 ORTHO05D007988 5.6e-132 475.3 452 56.2
Nitab4.5_0004661g0030 Nicotiana tabacum HOM05D006399 ORTHO05D007988 7.3e-132 474.9 392 60.5
HanXRQChr15g0476901 Helianthus annuus HOM05D006399 ORTHO05D007988 2.1e-131 473.4 436 54.8
Lsat_1_v5_gn_3_51980 Lactuca sativa HOM05D006399 ORTHO05D007988 2.1e-131 473.4 380 58.9
unitig_699.g19915 Utricularia gibba HOM05D006399 ORTHO05D007988 2.1e-131 473.4 460 52.8
PGR102G0590 Punica granatum HOM05D006399 ORTHO05D007988 2.6e-129 466.5 407 59.2
Lj3C1034G10 Lonicera japonica HOM05D006399 ORTHO05D007988 4.9e-128 462.2 366 62.0
Migut.L01261 Erythranthe guttata HOM05D006399 ORTHO05D007988 1.2e-126 457.6 448 55.1
CAN.G1335.8 Capsicum annuum HOM05D006399 ORTHO05D007988 3.5e-126 456.1 422 55.5
PGSC0003DMG400018440 Solanum tuberosum HOM05D006399 ORTHO05D007988 5.1e-125 452.2 425 54.1
THA.LOC104808694 Tarenaya hassleriana HOM05D006399 ORTHO05D007988 5.1e-125 452.2 433 55.0
Ah.02g129470 Amaranthus hybridus HOM05D006399 ORTHO05D007988 8.7e-125 451.4 426 53.8
ECA246G3166 Erigeron canadensis HOM05D006399 ORTHO05D007988 1.9e-124 450.3 374 58.8
Peaxi162Scf00222g00816 Petunia axillaris HOM05D006399 ORTHO05D007988 6.2e-123 445.3 414 54.6
Sopen05g003560 Solanum pennellii HOM05D006399 ORTHO05D007988 2.6e-121 439.9 427 54.1
BraA09t39516Z Brassica rapa HOM05D006399 ORTHO05D007988 9.9e-121 438.0 411 53.5
AUR62005827 Chenopodium quinoa HOM05D006399 ORTHO05D007988 9.9e-121 438.0 428 52.3
Thhalv10007591m.g Eutrema salsugineum HOM05D006399 ORTHO05D007988 1.3e-120 437.6 454 50.7
Solyc05g007680.1 Solanum lycopersicum HOM05D006399 ORTHO05D007988 2.9e-120 436.4 425 53.4
ATR0564G327 Amborella trichopoda HOM05D006399 ORTHO05D007988 8.4e-120 434.9 464 51.5
Sp1g22040 Schrenkiella parvula HOM05D006399 ORTHO05D007988 2.4e-119 433.3 411 53.8
AT1G26761 Arabidopsis thaliana HOM05D006399 ORTHO05D007988 1.2e-118 431.0 392 55.6
Aa31LG7G8360 Aethionema arabicum HOM05D006399 ORTHO05D007988 1.6e-118 430.6 445 51.5
AL1G38940 Arabidopsis lyrata HOM05D006399 ORTHO05D007988 4.6e-118 429.1 382 55.8
SEGI_38638 Sequoiadendron giganteum HOM05D006399 ORTHO05D007988 7.8e-118 428.3 372 55.1
A09p40180 Brassica napus HOM05D006399 ORTHO05D007988 3.9e-117 426.0 382 55.2
Carub.0001s2425 Capsella rubella HOM05D006399 ORTHO05D007988 1.5e-116 424.1 403 54.3
BcaC05g26389 Brassica carinata HOM05D006399 ORTHO05D007988 1.6e-115 420.6 380 55.3
C05p24200 Brassica napus HOM05D006399 ORTHO05D007988 1.6e-115 420.6 380 55.3
BolC5t31156H Brassica oleracea HOM05D006399 ORTHO05D007988 1.6e-115 420.6 380 55.3
CDE06G2322 Ceratophyllum demersum HOM05D006399 ORTHO05D007988 5.3e-114 415.6 395 54.7
GSVIVG01005153001 Vitis vinifera HOM05D006399 ORTHO05D007988 5.4e-111 405.6 503 46.3
CARHR025180 Cardamine hirsuta HOM05D006399 ORTHO05D007988 3.3e-108 396.4 387 53.0
Pp3c5_14870 Physcomitrium patens HOM05D006399 ORTHO05D007988 2.0e-97 360.5 374 48.1
FAN22G2397 Fragaria x ananassa HOM05D006399 ORTHO05D007988 1.1e-84 318.2 502 41.0
Os08g0433300 Oryza sativa ssp. japonica HOM05D006399 ORTHO05D007988 2.8e-83 313.5 362 47.5
MSTRG.719 Avicennia marina HOM05D006399 ORTHO05D007988 2.2e-80 303.9 284 58.1
Zm00001eb041520 Zea mays HOM05D006399 ORTHO05D007988 8.8e-77 292.0 356 47.5
AUR62032821 Chenopodium quinoa HOM05D006399 ORTHO05D007988 2.6e-73 280.4 259 54.8
SalBow2G2517 Salvia bowleyana HOM05D006399 ORTHO05D007988 1.0e-69 268.5 209 58.9
MBI05_g36409_MAGBIO Magnolia biondii HOM05D006399 ORTHO05D007988 9.7e-68 261.9 261 51.0
Cre06.g273050 Chlamydomonas reinhardtii HOM05D006399 ORTHO05D007988 4.8e-67 259.6 401 39.7
Ciclev10032022m.g Citrus clementina HOM05D006399 ORTHO05D007988 1.5e-55 221.5 515 31.5
PRCOL_00004009 Prasinoderma coloniale HOM05D006399 ORTHO05D007988 4.8e-51 206.5 395 34.7
Lj7C251T2 Lonicera japonica HOM05D006399 ORTHO05D007988 2.0e-49 201.1 310 38.4
COL.COLO4_27992 Corchorus olitorius HOM05D006399 ORTHO05D007988 5.2e-37 159.8 228 43.0
Pp3c9_20180 Physcomitrium patens HOM05D006399 ORTHO05D007988 1.3e-32 145.2 378 31.5
CDE02G1760 Ceratophyllum demersum HOM05D006399 ORTHO05D007988 2.3e-29 134.4 129 55.8
Lj7P254T18 Lonicera japonica HOM05D006399 ORTHO05D007988 2.6e-28 131.0 110 60.0
TWI75G1459 Tripterygium wilfordii HOM05D006399 ORTHO05D007988 2.9e-27 127.5 139 50.4
SEGI_31378 Sequoiadendron giganteum HOM05D006399 ORTHO05D007988 2.4e-26 124.4 352 31.2
Pp3c2_5840 Physcomitrium patens HOM05D006399 ORTHO05D007988 2.5e-23 114.4 227 37.0
SEGI_07124 Sequoiadendron giganteum HOM05D006399 ORTHO05D007988 3.3e-23 114.0 332 32.5
Hma1.2p1_0235F.1_g098770 Hydrangea macrophylla HOM05D006399 ORTHO05D007988 1.3e-16 92.0 52 76.9
AagrBONN_evm.TU.Sc2ySwM_362.1561 Anthoceros agrestis HOM05D006399 ORTHO05D007988 1.4e-10 72.0 243 29.2
AagrBONN_evm.TU.Sc2ySwM_362.1792 Anthoceros agrestis HOM05D006399 ORTHO05D007988 9.3e-10 69.3 217 29.0
SGA_v2.0_scaffold109G31082 Striga asiatica HOM05D006399 ORTHO05D007988 8.7e-08 62.8 46 58.7


User provided reference genes

Program Settings