Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.G02464 Eucalyptus grandis HOM05D002318 ORTHO05D008744 1.1e-184 649.8 338 100.0
PGR119G0925 Punica granatum HOM05D002318 ORTHO05D008744 4.7e-130 468.4 338 71.0
Cfa008908 Carpinus fangiana HOM05D002318 ORTHO05D008744 8.8e-129 464.2 335 71.3
Haze_11934 Corylus avellana HOM05D002318 ORTHO05D008744 2.0e-128 463.0 335 71.3
TAR622G0636 Trochodendron aralioides HOM05D002318 ORTHO05D004713 4.4e-128 461.8 333 69.4
QL03p070830 Quercus lobata HOM05D002318 ORTHO05D008744 5.7e-128 461.5 334 71.3
Potri.010G161600 Populus trichocarpa HOM05D002318 ORTHO05D008744 9.8e-128 460.7 335 71.6
MD16G1064900 Malus domestica HOM05D002318 ORTHO05D008744 2.8e-127 459.1 335 70.7
Thecc.02G336500 Theobroma cacao HOM05D002318 ORTHO05D008744 4.9e-127 458.4 332 70.5
CiPaw.05G128000 Carya illinoinensis HOM05D002318 ORTHO05D008744 6.3e-127 458.0 329 71.4
Cpa.g.sc1.87 Carica papaya HOM05D002318 ORTHO05D008744 2.7e-125 452.6 334 71.9
Sabra10G0122900 Salix brachista HOM05D002318 ORTHO05D008744 5.6e-123 444.9 335 70.1
COL.COLO4_27936 Corchorus olitorius HOM05D002318 ORTHO05D008744 1.2e-122 443.7 330 69.7
Atru.chr11.1690 Acer truncatum HOM05D002318 ORTHO05D008744 2.1e-122 443.0 330 68.8
TWI75G0802 Tripterygium wilfordii HOM05D002318 ORTHO05D008744 6.1e-122 441.4 339 68.4
RcHm_v2.0_Chr4g0438871 Rosa chinensis HOM05D002318 ORTHO05D008744 8.0e-122 441.0 330 69.7
Duzib268G0798 Durio zibethinus HOM05D002318 ORTHO05D008744 1.0e-121 440.7 328 67.7
GSVIVG01012177001 Vitis vinifera HOM05D002318 ORTHO05D008744 1.2e-120 437.2 335 67.5
Gorai.013G091200 Gossypium raimondii HOM05D002318 ORTHO05D008744 2.6e-120 436.0 335 66.3
Sopen05g007450 Solanum pennellii HOM05D002318 ORTHO05D008744 1.3e-119 433.7 337 67.1
FAN07G2980 Fragaria x ananassa HOM05D002318 ORTHO05D004713 2.2e-119 433.0 330 68.8
Gohir.A13G079900 Gossypium hirsutum HOM05D002318 ORTHO05D008744 3.7e-119 432.2 336 65.8
Aqoxy3G03551 Aquilegia oxysepala HOM05D002318 ORTHO05D008744 1.4e-118 430.3 335 65.7
MBI16_g06774_MAGBIO Magnolia biondii HOM05D002318 ORTHO05D008744 1.4e-118 430.3 334 67.4
TPR.G22412 Trifolium pratense HOM05D002318 ORTHO05D008744 1.4e-118 430.3 336 66.7
Lalb_Chr17g0340981 Lupinus albus HOM05D002318 ORTHO05D008744 5.4e-118 428.3 270 78.1
FAN22G0051 Fragaria x ananassa HOM05D002318 ORTHO05D008744 9.2e-118 427.6 330 68.5
THA.LOC104805183 Tarenaya hassleriana HOM05D002318 ORTHO05D008744 1.6e-117 426.8 334 67.7
Nitab4.5_0000334g0260 Nicotiana tabacum HOM05D002318 ORTHO05D008744 3.5e-117 425.6 299 70.2
Glyma.02G113500 Glycine max HOM05D002318 ORTHO05D008744 7.8e-117 424.5 329 67.5
CANSAT54G0184 Cannabis sativa HOM05D002318 ORTHO05D008744 1.0e-116 424.1 269 77.3
CsaV3_6G032440 Cucumis sativus L. HOM05D002318 ORTHO05D008744 1.0e-116 424.1 332 65.1
Sc11g0002270 Simmondsia chinensis HOM05D002318 ORTHO05D008744 1.3e-116 423.7 337 65.0
PGSC0003DMG401028329 Solanum tuberosum HOM05D002318 ORTHO05D008744 1.3e-116 423.7 337 65.0
PGSC0003DMG402022110 Solanum tuberosum HOM05D002318 ORTHO05D008744 1.3e-116 423.7 337 65.0
FAN17G2010 Fragaria x ananassa HOM05D002318 ORTHO05D008744 1.7e-116 423.3 341 66.6
Solyc05g012620.4 Solanum lycopersicum HOM05D002318 ORTHO05D008744 1.7e-116 423.3 274 75.2
Psat2g128360 Pisum sativum HOM05D002318 ORTHO05D008744 3.0e-116 422.5 331 67.4
MELO3C011434.2 Cucumis melo HOM05D002318 ORTHO05D008744 5.0e-116 421.8 334 64.4
Lsat_1_v5_gn_8_48101 Lactuca sativa HOM05D002318 ORTHO05D004713 6.6e-116 421.4 332 63.9
Ciclev10032054m.g Citrus clementina HOM05D002318 ORTHO05D008744 1.9e-115 419.9 330 66.4
Phvul.002G069400 Phaseolus vulgaris HOM05D002318 ORTHO05D008744 2.5e-115 419.5 330 66.4
VMungo1215G2584 Vigna mungo HOM05D002318 ORTHO05D008744 2.5e-115 419.5 283 73.5
CAN.G1340.13 Capsicum annuum HOM05D002318 ORTHO05D008744 5.6e-115 418.3 336 64.9
Ca_04907_v3 Cicer arietinum L. HOM05D002318 ORTHO05D008744 9.5e-115 417.5 329 65.3
Lj2g0021077 Lotus japonicus HOM05D002318 ORTHO05D008744 2.3e-113 412.9 330 65.2
ATR0111G011 Amborella trichopoda HOM05D002318 ORTHO05D008744 5.2e-113 411.8 336 65.8
Oeu021096.1 Olea europaea HOM05D002318 ORTHO05D008744 5.2e-113 411.8 290 71.4
Sp2g14310 Schrenkiella parvula HOM05D002318 ORTHO05D008744 8.9e-113 411.0 281 73.0
arahy.Tifrunner.gnm1.ann1.T5ZGHX Arachis hypogaea HOM05D002318 ORTHO05D008744 1.2e-112 410.6 309 69.9
FAN12G0082 Fragaria x ananassa HOM05D002318 ORTHO05D008744 1.5e-112 410.2 330 67.0
CARHR145730 Cardamine hirsuta HOM05D002318 ORTHO05D008744 2.6e-112 409.5 317 66.9
HanXRQChr12g0362851 Helianthus annuus HOM05D002318 ORTHO05D008744 2.6e-112 409.5 337 62.3
Hund05860 Selenicereus undatus HOM05D002318 ORTHO05D008744 2.6e-112 409.5 336 64.6
Aa31LG2G7170 Aethionema arabicum HOM05D002318 ORTHO05D008744 9.8e-112 407.5 343 64.7
BcaC06g34000 Brassica carinata HOM05D002318 ORTHO05D008744 1.3e-111 407.1 286 72.0
Thhalv10004578m.g Eutrema salsugineum HOM05D002318 ORTHO05D008744 1.3e-111 407.1 269 74.3
arahy.Tifrunner.gnm1.ann1.T0481B Arachis hypogaea HOM05D002318 ORTHO05D008744 1.7e-111 406.8 327 67.0
Cc11_g12380 Coffea canephora HOM05D002318 ORTHO05D008744 8.3e-111 404.4 334 61.4
DCAR_027449 Daucus carota HOM05D002318 ORTHO05D008744 3.2e-110 402.5 326 63.2
Carub.0005s0236 Capsella rubella HOM05D002318 ORTHO05D008744 7.0e-110 401.4 285 70.9
Migut.L01223 Erythranthe guttata HOM05D002318 ORTHO05D008744 7.0e-110 401.4 340 62.1
AL5G13100 Arabidopsis lyrata HOM05D002318 ORTHO05D008744 9.2e-110 401.0 284 70.4
AL5G13140 Arabidopsis lyrata HOM05D002318 ORTHO05D008744 9.2e-110 401.0 284 70.4
CSS0013540 Camellia sinensis var. sinensis HOM05D002318 ORTHO05D008744 1.2e-109 400.6 262 74.4
BcaC06g31184 Brassica carinata HOM05D002318 ORTHO05D008744 1.6e-109 400.2 264 75.8
AT2G03390 Arabidopsis thaliana HOM05D002318 ORTHO05D008744 2.7e-109 399.4 283 71.0
C07p33850 Brassica napus HOM05D002318 ORTHO05D008744 2.7e-109 399.4 288 71.9
BraA06t27203Z Brassica rapa HOM05D002318 ORTHO05D008744 3.5e-109 399.1 288 72.2
BolC7t43899H Brassica oleracea HOM05D002318 ORTHO05D008744 7.8e-109 397.9 288 71.5
Gohir.D13G079700 Gossypium hirsutum HOM05D002318 ORTHO05D008744 6.6e-108 394.8 335 61.5
ClCG08G010240 Citrullus lanatus HOM05D002318 ORTHO05D008744 1.1e-107 394.0 375 57.3
AUR62043182 Chenopodium quinoa HOM05D002318 ORTHO05D008744 4.3e-107 392.1 344 60.2
Peaxi162Scf00314g00023 Petunia axillaris HOM05D002318 ORTHO05D008744 4.3e-107 392.1 376 56.9
Actinidia19922 Actinidia chinensis HOM05D002318 ORTHO05D008744 2.6e-104 382.9 333 60.1
EL10As3g23350 Beta vulgaris HOM05D002318 ORTHO05D008744 1.7e-103 380.2 375 54.9
CDE04G0061 Ceratophyllum demersum HOM05D002318 ORTHO05D008744 1.7e-103 380.2 282 68.4
Rhsim12G0076700 Rhododendron simsii HOM05D002318 ORTHO05D008744 2.2e-103 379.8 282 67.0
Prupe.1G282000 Prunus persica HOM05D002318 ORTHO05D008744 2.9e-103 379.4 335 62.4
Ah.13g073950 Amaranthus hybridus HOM05D002318 ORTHO05D008744 6.4e-103 378.3 363 55.9
SalBow2G2755 Salvia bowleyana HOM05D002318 ORTHO05D008744 3.2e-102 375.9 340 59.4
Medtr5g043480 Medicago truncatula HOM05D002318 ORTHO05D008744 7.1e-102 374.8 336 60.4
ECA233G4874 Erigeron canadensis HOM05D002318 ORTHO05D008744 4.6e-101 372.1 320 62.2
vmacro01330 Vaccinium macrocarpon HOM05D002318 ORTHO05D008744 2.3e-100 369.8 316 59.8
Manes.01G030400 Manihot esculenta HOM05D002318 ORTHO05D008744 3.0e-100 369.4 284 70.1
Os08g0172200 Oryza sativa ssp. japonica HOM05D002318 ORTHO05D008744 6.8e-97 358.2 278 66.5
Hma1.2p1_0354F.1_g133650 Hydrangea macrophylla HOM05D002318 ORTHO05D008744 5.8e-96 355.1 282 64.9
SEGI_16280 Sequoiadendron giganteum HOM05D002318 ORTHO05D008744 2.9e-95 352.8 278 64.0
AUR62038089 Chenopodium quinoa HOM05D002318 ORTHO05D008744 2.4e-94 349.7 279 64.2
unitig_22.g6902 Utricularia gibba HOM05D002318 ORTHO05D008744 4.1e-94 349.0 307 62.2
Dinv34114 Davidia involucrata HOM05D002318 ORTHO05D008744 1.2e-93 347.4 269 68.4
Nn3g17371 Nelumbo nucifera HOM05D002318 ORTHO05D008744 6.0e-93 345.1 284 64.8
FvH4_4g30500 Fragaria vesca HOM05D002318 ORTHO05D008744 5.6e-91 338.6 269 68.0
A06p43150 Brassica napus HOM05D002318 ORTHO05D008744 1.7e-87 327.0 243 72.8
Lj6C782T15 Lonicera japonica HOM05D002318 ORTHO05D008744 5.4e-86 322.0 340 54.1
SGA_v2.0_scaffold16G07752 Striga asiatica HOM05D002318 ORTHO05D008744 7.1e-86 321.6 283 58.3
Mapoly0001s0530 Marchantia polymorpha HOM05D002318 ORTHO05D008744 6.0e-85 318.5 255 62.0
Pp3c7_3960 Physcomitrium patens HOM05D002318 ORTHO05D008744 6.0e-85 318.5 279 57.3
Sed0004708 Sechium edule HOM05D002318 ORTHO05D008744 7.3e-83 311.6 269 61.3
Dinv16705 Davidia involucrata HOM05D002318 ORTHO05D004713 8.7e-76 288.1 227 70.5
AagrBONN_evm.TU.Sc2ySwM_117.1985 Anthoceros agrestis HOM05D002318 ORTHO05D008744 1.6e-74 283.9 286 50.7
PSO591G0040 Papaver somniferum HOM05D002318 ORTHO05D008744 1.9e-70 270.4 258 56.6
Actinidia31948 Actinidia chinensis HOM05D002318 ORTHO05D008744 1.3e-68 264.2 273 51.6
FAN16G1553 Fragaria x ananassa HOM05D002318 ORTHO05D008744 1.3e-63 247.7 156 80.1
CBR_g27967 Chara braunii HOM05D002318 ORTHO05D008744 2.5e-62 243.4 252 48.8
SMO115G0105 Selaginella moellendorffii HOM05D002318 ORTHO05D008744 2.7e-61 240.0 212 56.1
CSS0007300 Camellia sinensis var. sinensis HOM05D002318 ORTHO05D008744 6.3e-58 228.8 172 69.8
Glyma.01G055000 Glycine max HOM05D002318 ORTHO05D008744 6.3e-58 228.8 164 75.6
arahy.Tifrunner.gnm1.ann1.1U2S5X Arachis hypogaea HOM05D002318 ORTHO05D008744 9.0e-57 224.9 217 61.3
arahy.Tifrunner.gnm1.ann1.TF58FW Arachis hypogaea HOM05D002318 ORTHO05D008744 2.6e-56 223.4 217 60.8
CSS0032009 Camellia sinensis var. sinensis HOM05D002318 ORTHO05D008744 7.7e-48 195.3 237 46.8
Zm00001eb370310 Zea mays HOM05D002318 ORTHO05D008744 3.8e-47 193.0 152 65.1
Cre02.g113700 Chlamydomonas reinhardtii HOM05D002318 ORTHO05D008744 4.8e-42 176.0 278 38.1
Aa31sc734G30 Aethionema arabicum HOM05D002318 ORTHO05D008744 3.4e-40 169.9 135 70.4
PRCOL_00000845 Prasinoderma coloniale HOM05D002318 ORTHO05D008744 1.3e-39 167.9 257 36.6
Glyma.01G054950 Glycine max HOM05D002318 ORTHO05D008744 5.7e-19 99.4 58 75.9
CBR_g50304 Chara braunii HOM05D020303 ORTHO05D021299 8.3e-18 95.5 157 38.2
Os01g0764500 Oryza sativa ssp. japonica HOM05D002318 ORTHO05D008744 3.6e-13 80.1 72 56.9
arahy.Tifrunner.gnm1.ann1.QV9UMR Arachis hypogaea HOM05D000001 ORTHO05D000003 3.7e-10 70.1 37 78.4
Lsat_1_v5_gn_5_151580 Lactuca sativa HOM05D002318 ORTHO05D008744 9.2e-09 65.5 55 61.8


User provided reference genes

Program Settings