Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.G02461 Eucalyptus grandis HOM05D006591 ORTHO05D007861 8.3e-84 314.7 325 100.0
TAR374G1558 Trochodendron aralioides HOM05D006591 ORTHO05D007861 2.7e-18 97.1 117 63.2
TWI75G0359 Tripterygium wilfordii HOM05D006591 ORTHO05D007861 1.4e-17 94.7 117 62.4
Hund25197 Selenicereus undatus HOM05D006591 ORTHO05D007861 6.7e-17 92.4 77 61.0
QL03p070967 Quercus lobata HOM05D006591 ORTHO05D007861 2.6e-16 90.5 117 44.4
Phvul.002G068900 Phaseolus vulgaris HOM05D006591 ORTHO05D007861 5.7e-16 89.4 117 45.3
THA.LOC104801815 Tarenaya hassleriana HOM05D006591 ORTHO05D007861 5.7e-16 89.4 77 62.3
TWI79G1606 Tripterygium wilfordii HOM05D006591 ORTHO05D007861 7.4e-16 89.0 115 56.5
CARHR145770 Cardamine hirsuta HOM05D006591 ORTHO05D007861 9.7e-16 88.6 77 61.0
Dinv16706 Davidia involucrata HOM05D006591 ORTHO05D007861 9.7e-16 88.6 86 59.3
A09p24440 Brassica napus HOM05D006591 ORTHO05D007861 1.7e-15 87.8 115 58.3
Lalb_Chr10g0098581 Lupinus albus HOM05D006591 ORTHO05D007861 1.7e-15 87.8 77 58.4
BcaC04g21487 Brassica carinata HOM05D006591 ORTHO05D007861 2.2e-15 87.4 117 44.4
C09p31230 Brassica napus HOM05D006591 ORTHO05D007861 2.2e-15 87.4 117 44.4
BolC9t55979H Brassica oleracea HOM05D006591 ORTHO05D007861 2.2e-15 87.4 117 44.4
Sp2g14340 Schrenkiella parvula HOM05D006591 ORTHO05D007861 2.2e-15 87.4 117 63.2
Atru.chr11.1685 Acer truncatum HOM05D006591 ORTHO05D007861 3.7e-15 86.7 77 57.1
BraA09t38037Z Brassica rapa HOM05D006591 ORTHO05D007861 3.7e-15 86.7 115 58.3
Actinidia19919 Actinidia chinensis HOM05D006591 ORTHO05D007861 4.8e-15 86.3 77 58.4
PSO017G3262 Papaver somniferum HOM05D006591 ORTHO05D007861 4.8e-15 86.3 118 62.7
Cfa008903 Carpinus fangiana HOM05D006591 ORTHO05D007861 6.3e-15 85.9 117 58.1
Manes.05G107800 Manihot esculenta HOM05D006591 ORTHO05D007861 6.3e-15 85.9 115 62.6
Nn4g23331 Nelumbo nucifera HOM05D006591 ORTHO05D007861 8.2e-15 85.5 115 60.0
Carub.0005s0239 Capsella rubella HOM05D006591 ORTHO05D007861 1.4e-14 84.7 115 63.5
Cpa.g.sc1.95 Carica papaya HOM05D006591 ORTHO05D007861 1.4e-14 84.7 75 58.7
CiPaw.06G090100 Carya illinoinensis HOM05D006591 ORTHO05D007861 1.8e-14 84.3 77 59.7
Potri.010G161300 Populus trichocarpa HOM05D006591 ORTHO05D007861 1.8e-14 84.3 77 58.4
Aa31LG2G7160 Aethionema arabicum HOM05D006961 ORTHO05D008809 2.4e-14 84.0 113 55.8
CANSAT64G0984 Cannabis sativa HOM05D006591 ORTHO05D007861 2.4e-14 84.0 77 61.0
Ca_04911_v3 Cicer arietinum L. HOM05D006591 ORTHO05D007861 2.4e-14 84.0 77 55.8
MELO3C002930.2 Cucumis melo HOM05D006591 ORTHO05D007861 2.4e-14 84.0 77 61.0
GSVIVG01012181001 Vitis vinifera HOM05D006591 ORTHO05D007861 2.4e-14 84.0 115 55.7
PGR119G1238 Punica granatum HOM05D006591 ORTHO05D007861 3.1e-14 83.6 117 41.0
Thecc.02G335700 Theobroma cacao HOM05D006591 ORTHO05D007861 3.1e-14 83.6 74 60.8
BcaB07g30669 Brassica carinata HOM05D006591 ORTHO05D007861 4.1e-14 83.2 117 59.0
CSS0024373 Camellia sinensis var. sinensis HOM05D006591 ORTHO05D007861 4.1e-14 83.2 78 57.7
Thhalv10004832m.g Eutrema salsugineum HOM05D006591 ORTHO05D007861 4.1e-14 83.2 75 57.3
AL5G13180 Arabidopsis lyrata HOM05D006591 ORTHO05D007861 5.3e-14 82.8 75 61.3
AT2G03430 Arabidopsis thaliana HOM05D006591 ORTHO05D007861 5.3e-14 82.8 67 61.2
Sabra10G0122800 Salix brachista HOM05D006591 ORTHO05D007861 5.3e-14 82.8 77 59.7
COL.COLO4_05797 Corchorus olitorius HOM05D006591 ORTHO05D007861 9.1e-14 82.0 59 66.1
Glyma.02G113900 Glycine max HOM05D006591 ORTHO05D007861 9.1e-14 82.0 117 46.2
CsaV3_5G025480 Cucumis sativus L. HOM05D006591 ORTHO05D007861 2.0e-13 80.9 77 59.7
CSS0002938 Camellia sinensis var. sinensis HOM05D006591 ORTHO05D007861 2.6e-13 80.5 78 56.4
CSS0020090 Camellia sinensis var. sinensis HOM05D006591 ORTHO05D007861 2.6e-13 80.5 78 56.4
Lj3C1032T3 Lonicera japonica HOM05D006591 ORTHO05D007861 2.6e-13 80.5 76 57.9
Rhsim12G0134100 Rhododendron simsii HOM05D006591 ORTHO05D007861 2.6e-13 80.5 77 58.4
Solyc05g012590.4 Solanum lycopersicum HOM05D006591 ORTHO05D007861 2.6e-13 80.5 100 46.0
Oeu028261.1 Olea europaea HOM05D006591 ORTHO05D007861 3.5e-13 80.1 75 54.7
Sc11g0002290 Simmondsia chinensis HOM05D006591 ORTHO05D007861 3.5e-13 80.1 117 59.0
Sopen05g007420 Solanum pennellii HOM05D006591 ORTHO05D007861 3.5e-13 80.1 100 61.0
PGSC0003DMG400028326 Solanum tuberosum HOM05D006591 ORTHO05D007861 3.5e-13 80.1 60 65.0
VMungo1215G0675 Vigna mungo HOM05D006591 ORTHO05D007861 3.5e-13 80.1 75 56.0
Psat2g128080 Pisum sativum HOM05D006591 ORTHO05D007861 4.5e-13 79.7 117 53.8
Glyma.01G055500 Glycine max HOM05D006591 ORTHO05D007861 5.9e-13 79.3 80 51.2
arahy.Tifrunner.gnm1.ann1.09DLU7 Arachis hypogaea HOM05D006591 ORTHO05D007861 7.7e-13 79.0 79 58.2
EL10Ac6g14958 Beta vulgaris HOM05D006591 ORTHO05D007861 7.7e-13 79.0 104 58.7
CSS0029304 Camellia sinensis var. sinensis HOM05D006591 ORTHO05D007861 7.7e-13 79.0 78 55.1
CSS0032544 Camellia sinensis var. sinensis HOM05D006591 ORTHO05D007861 7.7e-13 79.0 78 55.1
Ciclev10032613m.g Citrus clementina HOM05D006591 ORTHO05D007861 7.7e-13 79.0 77 53.2
Lj2g0025600 Lotus japonicus HOM05D006591 ORTHO05D007861 7.7e-13 79.0 77 54.5
MD16G1064400 Malus domestica HOM05D006591 ORTHO05D007861 7.7e-13 79.0 115 60.0
Medtr5g043640 Medicago truncatula HOM05D006591 ORTHO05D007861 7.7e-13 79.0 77 51.9
Cc11_g12350 Coffea canephora HOM05D006591 ORTHO05D007861 1.7e-12 77.8 116 42.2
SGA_v2.0_scaffold287G47153 Striga asiatica HOM05D006591 ORTHO05D007861 1.7e-12 77.8 74 58.1
Actinidia31944 Actinidia chinensis HOM05D006591 ORTHO05D007861 2.2e-12 77.4 75 54.7
MSTRG.2323 Avicennia marina HOM05D006591 ORTHO05D007861 2.9e-12 77.0 77 53.2
Haze_11932 Corylus avellana HOM05D006591 ORTHO05D007861 2.9e-12 77.0 74 52.7
Peaxi162Scf00314g00027 Petunia axillaris HOM05D006591 ORTHO05D007861 2.9e-12 77.0 99 52.5
RcHm_v2.0_Chr4g0438821 Rosa chinensis HOM05D006591 ORTHO05D007861 2.9e-12 77.0 115 60.9
PSO478G2874 Papaver somniferum HOM05D006591 ORTHO05D007861 3.8e-12 76.6 117 57.3
Prupe.1G282400 Prunus persica HOM05D006591 ORTHO05D007861 3.8e-12 76.6 77 53.2
Aqoxy3G00449 Aquilegia oxysepala HOM05D006591 ORTHO05D007861 5.0e-12 76.3 75 56.0
Migut.E00061 Erythranthe guttata HOM05D006591 ORTHO05D007861 6.5e-12 75.9 74 54.1
vmacro16368 Vaccinium macrocarpon HOM05D006591 ORTHO05D007861 6.5e-12 75.9 118 41.5
CAN.G1340.9 Capsicum annuum HOM05D006591 ORTHO05D007861 8.5e-12 75.5 100 55.0
MD13G1065800 Malus domestica HOM05D006591 ORTHO05D007861 8.5e-12 75.5 115 57.4
TPR.G2283 Trifolium pratense HOM05D006591 ORTHO05D007861 8.5e-12 75.5 115 41.7
Duzib268G0337 Durio zibethinus HOM05D006591 ORTHO05D007861 1.9e-11 74.3 70 54.3
ECA246G1963 Erigeron canadensis HOM05D006591 ORTHO05D007861 1.9e-11 74.3 115 54.8
Gohir.D05G306200 Gossypium hirsutum HOM05D006591 ORTHO05D007861 1.9e-11 74.3 59 61.0
DCAR_027452 Daucus carota HOM05D006591 ORTHO05D007861 2.5e-11 73.9 117 51.3
TPR.G24426 Trifolium pratense HOM05D006591 ORTHO05D007861 2.5e-11 73.9 75 54.7
arahy.Tifrunner.gnm1.ann1.74ATFD Arachis hypogaea HOM05D006591 ORTHO05D007861 3.2e-11 73.6 117 42.7
Gorai.009G326200 Gossypium raimondii HOM05D006591 ORTHO05D007861 3.2e-11 73.6 59 59.3
HanXRQChr17g0545461 Helianthus annuus HOM05D006591 ORTHO05D007861 4.2e-11 73.2 119 47.9
Gohir.A05G306200 Gossypium hirsutum HOM05D006591 ORTHO05D007861 7.2e-11 72.4 59 57.6
unitig_22.g5555 Utricularia gibba HOM05D006591 ORTHO05D007861 9.4e-11 72.0 74 48.6
Lsat_1_v5_gn_3_56260 Lactuca sativa HOM05D006591 ORTHO05D007861 1.6e-10 71.2 141 47.5
SEGI_35394 Sequoiadendron giganteum HOM05D006591 ORTHO05D007861 6.1e-10 69.3 60 56.7
ATR0111G005 Amborella trichopoda HOM05D006591 ORTHO05D007861 1.8e-09 67.8 74 48.6
Mapoly0001s0139 Marchantia polymorpha HOM05D006591 ORTHO05D007861 2.3e-09 67.4 57 54.4
Sed0000747 Sechium edule HOM05D006591 ORTHO05D007861 2.3e-09 67.4 65 56.9
Ah.02g126600 Amaranthus hybridus HOM05D006591 ORTHO05D007861 5.2e-09 66.2 68 50.0
C06p01310 Brassica napus HOM05D006591 ORTHO05D007861 5.2e-09 66.2 64 56.2
CSS0029980 Camellia sinensis var. sinensis HOM05D006591 ORTHO05D007861 5.2e-09 66.2 75 49.3
HPP92_018457 Vanilla planifolia HOM05D006591 ORTHO05D007861 5.2e-09 66.2 58 55.2
FAN22G1196 Fragaria x ananassa HOM05D006591 ORTHO05D007861 6.7e-09 65.9 115 56.5
FvH4_4g30470 Fragaria vesca HOM05D006591 ORTHO05D007861 8.8e-09 65.5 71 52.1
FAN17G0139 Fragaria x ananassa HOM05D006591 ORTHO05D007861 8.8e-09 65.5 114 57.0
FAN07G2187 Fragaria x ananassa HOM05D006591 ORTHO05D007861 1.5e-08 64.7 57 56.1
Zm00001eb214530 Zea mays HOM05D006591 ORTHO05D007861 1.5e-08 64.7 71 53.5
FAN12G1471 Fragaria x ananassa HOM05D006591 ORTHO05D007861 2.6e-08 63.9 71 50.7
CDE07G0054 Ceratophyllum demersum HOM05D006591 ORTHO05D007861 4.4e-08 63.2 74 45.9
AagrBONN_evm.TU.Sc2ySwM_344.1136 Anthoceros agrestis HOM05D006591 ORTHO05D007861 7.5e-08 62.4 55 52.7
EL10Ac6g14964 Beta vulgaris HOM05D027931 ORTHO05D007861 1.4e-06 58.2 57 50.9
Nitab4.5_0000334g0240 Nicotiana tabacum HOM05D006591 ORTHO05D007861 9.1e-06 55.5 77 44.2
Pp3c6_21850 Physcomitrium patens HOM05D006591 ORTHO05D007861 9.1e-06 55.5 56 50.0


User provided reference genes

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