Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.G02394 Eucalyptus grandis HOM05D006650 ORTHO05D008401 3.8e-128 461.5 224 100.0
SalBow8G0120 Salvia bowleyana HOM05D006650 ORTHO05D008401 3.7e-22 109.4 202 36.1
Hma1.2p1_1424F.1_g282730 Hydrangea macrophylla HOM05D006650 ORTHO05D008401 2.9e-11 73.2 71 60.6
Hma1.2p1_1459F.1_g284910 Hydrangea macrophylla HOM05D006650 ORTHO05D008401 2.9e-11 73.2 71 60.6
PGR119G1187 Punica granatum HOM05D006650 ORTHO05D008401 2.9e-11 73.2 107 51.4
COL.COLO4_27715 Corchorus olitorius HOM05D006650 ORTHO05D008401 3.8e-11 72.8 129 47.3
Potri.008G109700 Populus trichocarpa HOM05D006650 ORTHO05D008401 2.5e-10 70.1 41 85.4
Potri.T046554 Populus trichocarpa HOM05D006650 ORTHO05D008401 2.5e-10 70.1 41 85.4
MD16G1057600 Malus domestica HOM05D006650 ORTHO05D008401 3.2e-10 69.7 128 43.0
Atru.chr11.1444 Acer truncatum HOM05D006650 ORTHO05D008401 4.2e-10 69.3 128 44.5
CiPaw.05G118400 Carya illinoinensis HOM05D006650 ORTHO05D008401 7.2e-10 68.6 136 41.9
Gohir.A04G144800 Gossypium hirsutum HOM05D006650 ORTHO05D008401 7.2e-10 68.6 125 43.2
Sabra08G0083500 Salix brachista HOM05D006650 ORTHO05D008401 7.2e-10 68.6 41 82.9
Manes.14G094300 Manihot esculenta HOM05D006650 ORTHO05D008401 9.4e-10 68.2 41 82.9
Gohir.D04G189300 Gossypium hirsutum HOM05D006650 ORTHO05D008401 1.6e-09 67.4 125 43.2
Gorai.012G184600 Gossypium raimondii HOM05D006650 ORTHO05D008401 1.6e-09 67.4 125 43.2
MD13G1052300 Malus domestica HOM05D006650 ORTHO05D008401 1.6e-09 67.4 123 42.3
FAN07G0603 Fragaria x ananassa HOM05D006650 ORTHO05D008401 3.6e-09 66.2 56 64.3
Rhsim09G0116200 Rhododendron simsii HOM05D006650 ORTHO05D008401 3.6e-09 66.2 42 76.2
Rhsim09G0116700 Rhododendron simsii HOM05D006650 ORTHO05D008401 3.6e-09 66.2 42 76.2
Atru.chr11.1474 Acer truncatum HOM05D006650 ORTHO05D008401 4.6e-09 65.9 39 84.6
FvH4_4g28590 Fragaria vesca HOM05D006650 ORTHO05D008401 6.1e-09 65.5 56 64.3
FAN12G1321 Fragaria x ananassa HOM05D006650 ORTHO05D008401 6.1e-09 65.5 56 64.3
FAN17G3038 Fragaria x ananassa HOM05D006650 ORTHO05D008401 6.1e-09 65.5 56 64.3
TAR371G1079 Trochodendron aralioides HOM05D006650 ORTHO05D008401 6.1e-09 65.5 46 67.4
Nn4g23629 Nelumbo nucifera HOM05D006650 ORTHO05D008401 7.9e-09 65.1 41 78.0
Duzib248G0229 Durio zibethinus HOM05D006650 ORTHO05D008401 1.0e-08 64.7 123 41.5
Medtr6g021510 Medicago truncatula HOM05D006650 ORTHO05D008401 1.0e-08 64.7 121 39.7
TWI75G1831 Tripterygium wilfordii HOM05D006650 ORTHO05D008401 1.0e-08 64.7 54 66.7
THA.LOC104821976 Tarenaya hassleriana HOM05D006650 ORTHO05D008401 1.4e-08 64.3 127 42.5
Hma1.2p1_1424F.1_g282740 Hydrangea macrophylla HOM05D006650 ORTHO05D008401 1.8e-08 63.9 41 78.0
RcHm_v2.0_Chr4g0436681 Rosa chinensis HOM05D006650 ORTHO05D008401 1.8e-08 63.9 45 71.1
Hund05792 Selenicereus undatus HOM05D006650 ORTHO05D008401 1.8e-08 63.9 215 33.0
Thecc.02G315100 Theobroma cacao HOM05D006650 ORTHO05D008401 1.8e-08 63.9 86 51.2
vmacro10492 Vaccinium macrocarpon HOM05D006650 ORTHO05D008401 1.8e-08 63.9 105 43.8
Ca_04377_v3 Cicer arietinum L. HOM05D006650 ORTHO05D008401 2.3e-08 63.5 43 74.4
Haze_11820 Corylus avellana HOM05D006650 ORTHO05D008401 2.3e-08 63.5 102 47.1
Prupe.1G299800 Prunus persica HOM05D006650 ORTHO05D008401 2.3e-08 63.5 127 39.4
Aqoxy3G03817 Aquilegia oxysepala HOM05D006650 ORTHO05D008401 3.0e-08 63.2 39 76.9
ClCG08G004790 Citrullus lanatus HOM05D006650 ORTHO05D008401 3.9e-08 62.8 39 76.9
Cpa.g.sc1.261 Carica papaya HOM05D006650 ORTHO05D008401 5.1e-08 62.4 49 67.3
Glyma.02G128500 Glycine max HOM05D006650 ORTHO05D008401 5.1e-08 62.4 45 71.1
Lalb_Chr10g0099501 Lupinus albus HOM05D006650 ORTHO05D008401 5.1e-08 62.4 45 71.1
Psat1g085040 Pisum sativum HOM05D006650 ORTHO05D008401 5.1e-08 62.4 43 72.1
Ciclev10032286m.g Citrus clementina HOM05D006650 ORTHO05D008401 6.7e-08 62.0 125 40.8
CANSAT64G2403 Cannabis sativa HOM05D006650 ORTHO05D008401 8.8e-08 61.6 39 79.5
Cfa008806 Carpinus fangiana HOM05D006650 ORTHO05D008401 8.8e-08 61.6 102 46.1
MELO3C011665.2 Cucumis melo HOM05D006650 ORTHO05D008401 8.8e-08 61.6 39 74.4
CsaV3_6G003950 Cucumis sativus L. HOM05D006650 ORTHO05D008401 8.8e-08 61.6 39 74.4
PSO782G4155 Papaver somniferum HOM05D006650 ORTHO05D008401 8.8e-08 61.6 66 53.0
CDE02G2218 Ceratophyllum demersum HOM05D002187 ORTHO05D002243 1.1e-07 61.2 62 56.5
PSO063G6309 Papaver somniferum HOM05D006650 ORTHO05D008401 1.1e-07 61.2 58 56.9
Sed0026335 Sechium edule HOM05D006650 ORTHO05D008401 1.1e-07 61.2 39 74.4
arahy.Tifrunner.gnm1.ann1.1PS8SX Arachis hypogaea HOM05D006650 ORTHO05D008401 1.5e-07 60.8 38 78.9
FAN22G1912 Fragaria x ananassa HOM05D006650 ORTHO05D008401 2.0e-07 60.5 128 40.6
QL03p046578 Quercus lobata HOM05D006650 ORTHO05D008401 2.0e-07 60.5 124 44.4
TPR.G21643 Trifolium pratense HOM05D006650 ORTHO05D008401 2.0e-07 60.5 42 71.4
TAR371G0285 Trochodendron aralioides HOM05D006650 ORTHO05D008401 2.0e-07 60.5 99 47.5
VMungo1215G2545 Vigna mungo HOM05D006650 ORTHO05D008401 2.0e-07 60.5 104 46.2
TAR629G1747 Trochodendron aralioides HOM05D006650 ORTHO05D000624 2.6e-07 60.1 41 68.3
HPP92_021645 Vanilla planifolia HOM05D006650 ORTHO05D008401 2.6e-07 60.1 43 67.4
Dinv27412 Davidia involucrata HOM05D006650 ORTHO05D008401 3.3e-07 59.7 46 63.0
Migut.L01126 Erythranthe guttata HOM05D006650 ORTHO05D008401 3.3e-07 59.7 44 68.2
AUR62007783 Chenopodium quinoa HOM05D006650 ORTHO05D008401 7.4e-07 58.5 39 71.8
DCAR_023721 Daucus carota HOM05D006650 ORTHO05D008401 7.4e-07 58.5 39 74.4
AL1G39570 Arabidopsis lyrata HOM05D006650 ORTHO05D008401 9.7e-07 58.2 128 42.2
Nitab4.5_0000259g0270 Nicotiana tabacum HOM05D006650 ORTHO05D008401 9.7e-07 58.2 42 71.4
Actinidia32425 Actinidia chinensis HOM05D006650 ORTHO05D008401 1.3e-06 57.8 52 61.5
Carub.0001s2478 Capsella rubella HOM05D006650 ORTHO05D008401 1.3e-06 57.8 125 40.0
CAN.G184.36 Capsicum annuum HOM05D006650 ORTHO05D008401 1.3e-06 57.8 49 65.3
ECA246G1261 Erigeron canadensis HOM05D006650 ORTHO05D008401 1.3e-06 57.8 48 64.6
Phvul.003G034600 Phaseolus vulgaris HOM05D006650 ORTHO05D008401 1.7e-06 57.4 96 44.8
Sopen05g006230 Solanum pennellii HOM05D006650 ORTHO05D008401 1.7e-06 57.4 42 71.4
PGSC0003DMG400007519 Solanum tuberosum HOM05D006650 ORTHO05D008401 1.7e-06 57.4 42 71.4
Thhalv10008392m.g Eutrema salsugineum HOM05D006650 ORTHO05D008401 2.2e-06 57.0 126 41.3
Peaxi162Scf00004g02825 Petunia axillaris HOM05D006650 ORTHO05D008401 2.2e-06 57.0 68 39.7
SGA_v2.0_scaffold16G07854 Striga asiatica HOM05D006650 ORTHO05D008401 2.2e-06 57.0 54 55.6
CARHR025730 Cardamine hirsuta HOM05D006650 ORTHO05D008401 2.8e-06 56.6 125 40.0
Aa31LG7G8830 Aethionema arabicum HOM05D006650 ORTHO05D008401 3.7e-06 56.2 34 76.5
Ah.02g127370 Amaranthus hybridus HOM05D006650 ORTHO05D008401 3.7e-06 56.2 39 69.2
AUR62002977 Chenopodium quinoa HOM05D006650 ORTHO05D008401 3.7e-06 56.2 39 69.2
HanXRQChr15g0475871 Helianthus annuus HOM05D006650 ORTHO05D008401 3.7e-06 56.2 48 62.5
Lsat_1_v5_gn_3_61200 Lactuca sativa HOM05D006650 ORTHO05D008401 3.7e-06 56.2 39 69.2
Lj2g0026821 Lotus japonicus HOM05D006650 ORTHO05D008401 3.7e-06 56.2 117 44.4
Sp1g22480 Schrenkiella parvula HOM05D006650 ORTHO05D008401 3.7e-06 56.2 34 79.4
Cc11_g11090 Coffea canephora HOM05D006650 ORTHO05D008401 4.8e-06 55.8 41 68.3
EL10Ac6g14586 Beta vulgaris HOM05D006650 ORTHO05D008401 6.3e-06 55.5 118 40.7


User provided reference genes

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