Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.G02336 Eucalyptus grandis HOM05D006863 ORTHO05D009101 1.8e-201 705.7 354 100.0
Prupe.1G308400 Prunus persica HOM05D006863 ORTHO05D009101 2.2e-122 443.0 295 74.2
Dinv04484 Davidia involucrata HOM05D006863 ORTHO05D009101 2.7e-120 436.0 257 80.9
RcHm_v2.0_Chr4g0435511 Rosa chinensis HOM05D006863 ORTHO05D009101 3.5e-120 435.6 317 69.1
Ciclev10031676m.g Citrus clementina HOM05D006863 ORTHO05D009101 4.6e-120 435.3 309 70.6
CSS0023691 Camellia sinensis var. sinensis HOM05D006863 ORTHO05D009101 1.0e-119 434.1 310 70.3
Potri.010G127200 Populus trichocarpa HOM05D006863 ORTHO05D009101 1.0e-119 434.1 289 73.0
MD13G1044100 Malus domestica HOM05D006863 ORTHO05D009101 5.1e-119 431.8 299 72.6
HanXRQChr17g0552211 Helianthus annuus HOM05D006863 ORTHO05D009101 6.7e-119 431.4 283 73.1
Gohir.1Z049378 Gossypium hirsutum HOM05D006863 ORTHO05D009101 1.1e-118 430.6 305 71.1
Gohir.A13G053600 Gossypium hirsutum HOM05D006863 ORTHO05D009101 1.1e-118 430.6 305 71.1
CANSAT56G0117 Cannabis sativa HOM05D006863 ORTHO05D009101 1.9e-118 429.9 252 81.3
QL01p043996 Quercus lobata HOM05D006863 ORTHO05D009101 9.6e-118 427.6 250 80.8
Thecc.02G357800 Theobroma cacao HOM05D006863 ORTHO05D009101 3.7e-117 425.6 296 70.9
TPR.G38252 Trifolium pratense HOM05D006863 ORTHO05D009101 4.8e-117 425.2 281 71.9
Gorai.013G081400 Gossypium raimondii HOM05D006863 ORTHO05D009101 6.2e-117 424.9 312 68.6
Atru.chr11.1297 Acer truncatum HOM05D006863 ORTHO05D009101 1.1e-116 424.1 275 74.9
Phvul.002G082500 Phaseolus vulgaris HOM05D006863 ORTHO05D009101 1.1e-116 424.1 267 75.3
Gohir.D13G071100 Gossypium hirsutum HOM05D006863 ORTHO05D009101 1.8e-116 423.3 312 68.3
Medtr5g054910 Medicago truncatula HOM05D006863 ORTHO05D009101 2.4e-116 422.9 288 72.6
Manes.14G100000 Manihot esculenta HOM05D006863 ORTHO05D009101 3.1e-116 422.5 274 74.5
Sabra10G0096600 Salix brachista HOM05D006863 ORTHO05D009101 3.1e-116 422.5 277 73.3
TAR371G0467 Trochodendron aralioides HOM05D006863 ORTHO05D009101 3.1e-116 422.5 250 80.0
GSVIVG01011920001 Vitis vinifera HOM05D006863 ORTHO05D009101 4.0e-116 422.2 271 75.3
ClCG08G005160 Citrullus lanatus HOM05D006863 ORTHO05D009101 2.6e-115 419.5 292 70.2
FAN12G1275 Fragaria x ananassa HOM05D006863 ORTHO05D009101 3.4e-115 419.1 288 72.6
Glyma.08G260300 Glycine max HOM05D006863 ORTHO05D009101 4.5e-115 418.7 270 73.7
PGR119G0754 Punica granatum HOM05D006863 ORTHO05D009101 7.6e-115 417.9 334 67.4
Lj2g0005111 Lotus japonicus HOM05D006863 ORTHO05D009101 1.7e-114 416.8 258 76.7
Lj3C1017T9 Lonicera japonica HOM05D006863 ORTHO05D009101 2.2e-114 416.4 277 73.6
arahy.Tifrunner.gnm1.ann1.2EV214 Arachis hypogaea HOM05D006863 ORTHO05D009101 2.9e-114 416.0 313 67.1
arahy.Tifrunner.gnm1.ann1.S0U20I Arachis hypogaea HOM05D006863 ORTHO05D009101 4.9e-114 415.2 313 67.1
Lalb_Chr17g0342021 Lupinus albus HOM05D006863 ORTHO05D009101 6.4e-114 414.8 286 69.2
CsaV3_6G003370 Cucumis sativus L. HOM05D006863 ORTHO05D009101 8.4e-114 414.5 293 68.6
Duzib251G0889 Durio zibethinus HOM05D006863 ORTHO05D009101 8.4e-114 414.5 333 64.6
Rhsim09G0110000 Rhododendron simsii HOM05D006863 ORTHO05D009101 2.4e-113 412.9 354 61.3
Lsat_1_v5_gn_3_59660 Lactuca sativa HOM05D006863 ORTHO05D009101 4.2e-113 412.1 275 71.6
ECA246G5009 Erigeron canadensis HOM05D006863 ORTHO05D009101 5.5e-113 411.8 248 77.0
Nitab4.5_0000280g0240 Nicotiana tabacum HOM05D006863 ORTHO05D009101 7.1e-113 411.4 253 73.1
VMungo1215G1485 Vigna mungo HOM05D006863 ORTHO05D009101 7.1e-113 411.4 283 68.9
Sed0022103 Sechium edule HOM05D006863 ORTHO05D009101 4.6e-112 408.7 296 67.2
EL10Ac6g14444 Beta vulgaris HOM05D006863 ORTHO05D009101 6.0e-112 408.3 273 71.1
Sopen04g002190 Solanum pennellii HOM05D006863 ORTHO05D009101 1.0e-111 407.5 270 70.7
vmacro10546 Vaccinium macrocarpon HOM05D006863 ORTHO05D009101 3.9e-111 405.6 345 61.2
Cc11_g10350 Coffea canephora HOM05D006863 ORTHO05D009101 6.7e-111 404.8 284 68.0
PGSC0003DMG401015876 Solanum tuberosum HOM05D006863 ORTHO05D009101 1.1e-110 404.1 281 68.7
Migut.L01080 Erythranthe guttata HOM05D006863 ORTHO05D009101 7.4e-110 401.4 289 67.5
Nitab4.5_0009260g0040 Nicotiana tabacum HOM05D006863 ORTHO05D009101 7.4e-110 401.4 253 71.9
Solyc04g007110.4 Solanum lycopersicum HOM05D006863 ORTHO05D009101 7.4e-110 401.4 265 71.3
SalBow8G2780 Salvia bowleyana HOM05D006863 ORTHO05D009101 2.8e-109 399.4 300 65.3
Aqoxy3G00331 Aquilegia oxysepala HOM05D006863 ORTHO05D009101 8.2e-109 397.9 257 73.2
Carub.0005s0363 Capsella rubella HOM05D006863 ORTHO05D009101 1.8e-108 396.7 268 69.0
BcaC04g21415 Brassica carinata HOM05D006863 ORTHO05D005487 5.3e-108 395.2 268 70.5
C09p32050 Brassica napus HOM05D006863 ORTHO05D009101 5.3e-108 395.2 268 70.5
BolC9t56057H Brassica oleracea HOM05D006863 ORTHO05D005487 5.3e-108 395.2 268 70.5
Cpa.g.sc1.191 Carica papaya HOM05D006863 ORTHO05D009101 1.2e-107 394.0 279 71.0
Sp2g15050 Schrenkiella parvula HOM05D006863 ORTHO05D009101 1.2e-107 394.0 268 70.1
FvH4_4g27661 Fragaria vesca HOM05D006863 ORTHO05D009101 1.5e-107 393.7 225 80.9
AL5G14420 Arabidopsis lyrata HOM05D006863 ORTHO05D009101 2.0e-107 393.3 275 68.7
arahy.Tifrunner.gnm1.ann1.PE9U7E Arachis hypogaea HOM05D006863 ORTHO05D009101 3.4e-107 392.5 347 59.7
Thhalv10004539m.g Eutrema salsugineum HOM05D006863 ORTHO05D009101 4.5e-107 392.1 269 68.0
Aa31LG2G6540 Aethionema arabicum HOM05D006863 ORTHO05D009101 5.8e-107 391.7 250 73.6
BraA09t38093Z Brassica rapa HOM05D006863 ORTHO05D005487 7.6e-107 391.3 268 70.1
AT3G25805 Arabidopsis thaliana HOM05D006863 ORTHO05D009101 1.0e-106 391.0 263 69.6
CiPaw.15G005400 Carya illinoinensis HOM05D006863 ORTHO05D009101 2.2e-106 389.8 227 80.6
MBI12_g32420_MAGBIO Magnolia biondii HOM05D006863 ORTHO05D009101 2.2e-106 389.8 276 65.6
A09p25060 Brassica napus HOM05D006863 ORTHO05D005487 2.9e-106 389.4 268 70.1
THA.LOC104825705 Tarenaya hassleriana HOM05D006863 ORTHO05D009101 6.5e-106 388.3 283 65.4
AUR62035252 Chenopodium quinoa HOM05D006863 ORTHO05D009101 1.1e-105 387.5 279 67.0
Ah.03g137770 Amaranthus hybridus HOM05D006863 ORTHO05D005487 1.9e-105 386.7 373 54.7
Peaxi162Scf00086g00919 Petunia axillaris HOM05D006863 ORTHO05D009101 1.6e-104 383.6 298 61.7
Actinidia14870 Actinidia chinensis HOM05D006863 ORTHO05D009101 2.1e-104 383.3 251 76.1
MSTRG.824 Avicennia marina HOM05D006863 ORTHO05D009101 3.9e-103 379.0 267 67.4
PSO210G1549 Papaver somniferum HOM05D006863 ORTHO05D009101 4.8e-101 372.1 245 69.0
Os04g0462300 Oryza sativa ssp. japonica HOM05D006863 ORTHO05D009101 1.8e-100 370.2 310 59.0
PSO447G0382 Papaver somniferum HOM05D006863 ORTHO05D009101 1.2e-99 367.5 245 67.3
Nn4g23802 Nelumbo nucifera HOM05D006863 ORTHO05D009101 2.9e-98 362.8 309 61.2
BcaB07g30631 Brassica carinata HOM05D001825 ORTHO05D009101 8.5e-98 361.3 247 70.0
HPP92_023480 Vanilla planifolia HOM05D006863 ORTHO05D009101 8.5e-98 361.3 253 67.6
SGA_v2.0_scaffold32G13125 Striga asiatica HOM05D006863 ORTHO05D009101 1.0e-90 337.8 319 56.1
Peaxi162Scf00086g00918 Petunia axillaris HOM05D006863 ORTHO05D009101 3.6e-88 329.3 280 57.5
unitig_22.g6873 Utricularia gibba HOM05D001580 ORTHO05D009101 8.8e-87 324.7 264 61.0
DCAR_026725 Daucus carota HOM05D006863 ORTHO05D009101 3.3e-86 322.8 292 58.9
Psat4g144720 Pisum sativum HOM05D006863 ORTHO05D009101 2.8e-85 319.7 208 70.7
ATR0141G001 Amborella trichopoda HOM05D006863 ORTHO05D009101 1.2e-83 314.3 276 56.2
FAN22G1855 Fragaria x ananassa HOM05D006863 ORTHO05D009101 1.0e-82 311.2 181 77.9
Zm00001eb080610 Zea mays HOM05D006863 ORTHO05D009101 1.4e-81 307.4 378 47.4
TWI75G0199 Tripterygium wilfordii HOM05D006863 ORTHO05D009101 1.2e-80 304.3 180 77.8
AUR62002895 Chenopodium quinoa HOM05D006863 ORTHO05D009101 1.0e-79 301.2 193 72.5
Mapoly0073s0050 Marchantia polymorpha HOM05D006863 ORTHO05D009101 3.0e-79 299.7 270 55.9
Haze_17458 Corylus avellana HOM05D006863 ORTHO05D009101 1.5e-78 297.4 254 61.4
Sc04g0006570 Simmondsia chinensis HOM05D006863 ORTHO05D009101 5.7e-78 295.4 180 76.1
CARHR146720 Cardamine hirsuta HOM05D006863 ORTHO05D009101 9.7e-78 294.7 196 66.8
SEGI_08911 Sequoiadendron giganteum HOM05D006863 ORTHO05D009101 1.4e-76 290.8 231 59.3
SEGI_20209 Sequoiadendron giganteum HOM05D006863 ORTHO05D009101 1.4e-76 290.8 231 59.3
AUR62002896 Chenopodium quinoa HOM05D006863 ORTHO05D009101 1.6e-72 277.3 187 69.5
Glyma.20G042600 Glycine max HOM05D006863 ORTHO05D009101 2.1e-72 276.9 164 75.6
Pp3c1_42010 Physcomitrium patens HOM05D006863 ORTHO05D009101 1.5e-70 270.8 290 46.2
SMO111G0216 Selaginella moellendorffii HOM05D006863 ORTHO05D009101 1.1e-68 264.6 310 43.9
MELO3C011551.2 Cucumis melo HOM05D006863 ORTHO05D009101 2.2e-66 256.9 167 68.9
CSS0005134 Camellia sinensis var. sinensis HOM05D006863 ORTHO05D009101 9.1e-60 235.0 310 45.8
CSS0013896 Camellia sinensis var. sinensis HOM05D006863 ORTHO05D009101 9.1e-60 235.0 310 45.8
Ca_27358_v3 Cicer arietinum L. HOM05D006863 ORTHO05D009101 3.5e-59 233.0 191 61.3
AagrBONN_evm.TU.Sc2ySwM_117.2959 Anthoceros agrestis HOM05D006863 ORTHO05D009101 1.3e-58 231.1 312 42.9
COL.COLO4_07899 Corchorus olitorius HOM05D006863 ORTHO05D009101 4.0e-55 219.5 181 60.2
Hund25085 Selenicereus undatus HOM05D006863 ORTHO05D009101 7.3e-49 198.7 152 67.1
Gorai.012G052200 Gossypium raimondii HOM05D006863 ORTHO05D009101 1.6e-48 197.6 131 70.2
Gohir.D04G047100 Gossypium hirsutum HOM05D006863 ORTHO05D009101 4.0e-47 193.0 131 69.5
Gohir.D11G195601 Gossypium hirsutum HOM05D006863 ORTHO05D009101 2.3e-42 177.2 131 64.9
SMO358G0636 Selaginella moellendorffii HOM05D006863 ORTHO05D009101 4.7e-40 169.5 255 36.5
MD16G1044900 Malus domestica HOM05D006863 ORTHO05D009101 5.2e-31 139.4 91 72.5
CDE11G0826 Ceratophyllum demersum HOM05D006863 ORTHO05D009101 1.5e-30 137.9 104 61.5
PRCOL_00006784 Prasinoderma coloniale HOM05D006863 ORTHO05D002945 3.2e-28 130.2 275 34.2
MCO04G047 Micromonas commoda HOM05D006863 ORTHO05D002945 1.7e-26 124.4 338 31.4
Oeu042053.1 Olea europaea HOM05D006863 ORTHO05D009101 2.4e-20 104.0 79 64.6
Cre02.g088500 Chlamydomonas reinhardtii HOM05D002745 ORTHO05D002945 7.1e-20 102.4 255 30.2
Sc04g0006560 Simmondsia chinensis HOM05D006863 ORTHO05D009101 2.5e-17 94.0 78 60.3
Haze_17459 Corylus avellana HOM05D006863 ORTHO05D044797 1.8e-07 61.2 98 45.9


User provided reference genes

Program Settings