Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.G02191 Eucalyptus grandis HOM05D005313 ORTHO05D006317 8.0e-200 700.3 367 100.0
TWI31G1405 Tripterygium wilfordii HOM05D005313 ORTHO05D006317 1.4e-156 556.6 359 80.5
Lalb_Chr17g0338641 Lupinus albus HOM05D005313 ORTHO05D006317 1.2e-155 553.5 339 81.7
Thecc.02G280500 Theobroma cacao HOM05D005313 ORTHO05D006317 3.5e-155 552.0 338 84.0
COL.COLO4_20475 Corchorus olitorius HOM05D005313 ORTHO05D006317 6.6e-154 547.7 367 78.7
PGR119G0894 Punica granatum HOM05D005313 ORTHO05D006317 8.6e-154 547.4 331 85.5
Potri.008G128900 Populus trichocarpa HOM05D005313 ORTHO05D006317 1.1e-153 547.0 336 82.4
TAR623G0220 Trochodendron aralioides HOM05D005313 ORTHO05D006317 1.1e-153 547.0 341 81.8
Atru.chr9.122 Acer truncatum HOM05D005313 ORTHO05D006317 7.3e-153 544.3 336 82.1
Gorai.002G179900 Gossypium raimondii HOM05D005313 ORTHO05D006317 7.3e-153 544.3 338 82.2
Gohir.A01G152800 Gossypium hirsutum HOM05D005313 ORTHO05D006317 1.2e-152 543.5 338 82.2
CSS0048776 Camellia sinensis var. sinensis HOM05D005313 ORTHO05D006317 1.1e-151 540.4 336 82.7
Gohir.D01G145600 Gossypium hirsutum HOM05D005313 ORTHO05D006317 1.1e-151 540.4 338 81.7
Lj6A747T68 Lonicera japonica HOM05D005313 ORTHO05D006317 2.3e-151 539.3 350 79.7
GSVIVG01011763001 Vitis vinifera HOM05D005313 ORTHO05D006317 2.3e-151 539.3 315 86.0
Manes.17G006600 Manihot esculenta HOM05D005313 ORTHO05D006317 4.0e-151 538.5 337 80.1
Lj2g0003652 Lotus japonicus HOM05D005313 ORTHO05D006317 8.9e-151 537.3 336 80.7
Prupe.1G323900 Prunus persica HOM05D005313 ORTHO05D006317 1.5e-150 536.6 342 79.8
Glyma.09G118600 Glycine max HOM05D005313 ORTHO05D006317 3.4e-150 535.4 357 76.2
Rhsim02G0199800 Rhododendron simsii HOM05D005313 ORTHO05D006317 3.4e-150 535.4 338 81.7
Medtr1g030750 Medicago truncatula HOM05D005313 ORTHO05D006317 5.8e-150 534.6 364 75.3
PSO384G2037 Papaver somniferum HOM05D005313 ORTHO05D006317 5.8e-150 534.6 367 74.9
Phvul.003G023500 Phaseolus vulgaris HOM05D005313 ORTHO05D006317 5.8e-150 534.6 336 79.8
Glyma.02G238100 Glycine max HOM05D005313 ORTHO05D006317 7.6e-150 534.3 357 76.2
FvH4_4g32330 Fragaria vesca HOM05D005313 ORTHO05D006317 9.9e-150 533.9 377 75.9
QL01p001863 Quercus lobata HOM05D005313 ORTHO05D006317 1.3e-149 533.5 336 80.7
Cfa008602 Carpinus fangiana HOM05D005313 ORTHO05D006317 1.7e-149 533.1 328 82.6
THA.LOC104805057 Tarenaya hassleriana HOM05D005313 ORTHO05D006317 2.9e-149 532.3 354 76.8
Psat6g042560 Pisum sativum HOM05D005313 ORTHO05D006317 3.8e-149 531.9 336 79.5
vmacro10642 Vaccinium macrocarpon HOM05D005313 ORTHO05D006317 3.8e-149 531.9 340 80.6
RcHm_v2.0_Chr4g0441121 Rosa chinensis HOM05D005313 ORTHO05D006317 4.9e-149 531.6 373 75.1
BcaB07g30404 Brassica carinata HOM05D005313 ORTHO05D006317 1.4e-148 530.0 337 80.4
MD16G1029000 Malus domestica HOM05D005313 ORTHO05D006317 1.9e-148 529.6 370 74.6
VMungo1215G0481 Vigna mungo HOM05D005313 ORTHO05D006317 2.4e-148 529.3 345 76.5
Carub.0005s0033 Capsella rubella HOM05D005313 ORTHO05D006317 4.1e-148 528.5 331 81.0
FAN17G2517 Fragaria x ananassa HOM05D005313 ORTHO05D006317 1.2e-147 526.9 385 74.0
Sp2g12800 Schrenkiella parvula HOM05D005313 ORTHO05D006317 1.2e-147 526.9 344 77.9
Cc11_g08770 Coffea canephora HOM05D005313 ORTHO05D006317 2.1e-147 526.2 336 80.1
AL5G10310 Arabidopsis lyrata HOM05D005313 ORTHO05D006317 3.5e-147 525.4 336 79.8
CANSAT01G3269 Cannabis sativa HOM05D005313 ORTHO05D006317 3.5e-147 525.4 348 76.7
PSO339G3364 Papaver somniferum HOM05D005313 ORTHO05D006317 4.6e-147 525.0 346 77.5
Thhalv10000908m.g Eutrema salsugineum HOM05D005313 ORTHO05D006317 7.8e-147 524.2 336 79.5
CARHR143870 Cardamine hirsuta HOM05D005313 ORTHO05D006317 1.7e-146 523.1 349 77.4
C02p49400 Brassica napus HOM05D005313 ORTHO05D006317 2.3e-146 522.7 343 77.6
Oeu024584.1 Olea europaea HOM05D005313 ORTHO05D006317 2.3e-146 522.7 349 78.2
SalBow4G0219 Salvia bowleyana HOM05D005313 ORTHO05D006317 5.1e-146 521.5 338 81.1
AT2G01350 Arabidopsis thaliana HOM05D005313 ORTHO05D006317 6.6e-146 521.2 336 79.5
A02p31910 Brassica napus HOM05D005313 ORTHO05D006317 6.6e-146 521.2 342 78.1
BraA02t08201Z Brassica rapa HOM05D005313 ORTHO05D006317 6.6e-146 521.2 342 78.1
Sc14g0007170 Simmondsia chinensis HOM05D005313 ORTHO05D006317 8.6e-146 520.8 317 82.3
FAN22G0311 Fragaria x ananassa HOM05D005313 ORTHO05D006317 3.3e-145 518.8 385 73.0
Nitab4.5_0000742g0010 Nicotiana tabacum HOM05D005313 ORTHO05D006317 3.3e-145 518.8 336 79.2
MSTRG.895 Avicennia marina HOM05D005313 ORTHO05D006317 4.3e-145 518.5 359 74.9
BcaC03g17029 Brassica carinata HOM05D005313 ORTHO05D006317 4.3e-145 518.5 342 77.5
CDE05G1915 Ceratophyllum demersum HOM05D005313 ORTHO05D006317 4.3e-145 518.5 362 74.6
BolC2t11026H Brassica oleracea HOM05D005313 ORTHO05D006317 5.6e-145 518.1 342 77.5
HanXRQChr15g0488661 Helianthus annuus HOM05D005313 ORTHO05D006317 1.2e-144 516.9 359 75.2
Ca_25713_v3 Cicer arietinum L. HOM05D005313 ORTHO05D006317 2.1e-144 516.2 370 71.9
Aa31LG2G8560 Aethionema arabicum HOM05D005313 ORTHO05D006317 2.8e-144 515.8 352 75.9
Lsat_1_v5_gn_3_54641 Lactuca sativa HOM05D005313 ORTHO05D006317 3.6e-144 515.4 358 74.3
ECA246G2448 Erigeron canadensis HOM05D005313 ORTHO05D006317 8.1e-144 514.2 336 79.2
FAN07G2253 Fragaria x ananassa HOM05D005313 ORTHO05D006317 8.1e-144 514.2 403 70.0
Aqoxy1G00025 Aquilegia oxysepala HOM05D005313 ORTHO05D006317 1.4e-143 513.5 313 82.4
Solyc05g008180.3 Solanum lycopersicum HOM05D005313 ORTHO05D006317 2.4e-143 512.7 336 78.6
Sopen05g004020 Solanum pennellii HOM05D005313 ORTHO05D006317 3.1e-143 512.3 336 78.6
Peaxi162Scf00159g00112 Petunia axillaris HOM05D005313 ORTHO05D006317 8.9e-143 510.8 337 79.2
Sabra08G0097700 Salix brachista HOM05D005313 ORTHO05D006317 2.0e-142 509.6 397 69.3
Peaxi162Scf00450g00614 Petunia axillaris HOM05D005313 ORTHO05D006317 3.4e-142 508.8 337 78.6
AUR62017725 Chenopodium quinoa HOM05D005313 ORTHO05D006317 4.4e-142 508.4 311 82.0
CsaV3_5G013570 Cucumis sativus L. HOM05D005313 ORTHO05D006317 1.7e-141 506.5 339 76.1
PGSC0003DMG400030501 Solanum tuberosum HOM05D005313 ORTHO05D006317 1.7e-141 506.5 317 81.1
MELO3C018332.2 Cucumis melo HOM05D005313 ORTHO05D006317 8.4e-141 504.2 339 75.8
Sed0021241 Sechium edule HOM05D005313 ORTHO05D006317 1.4e-140 503.4 335 75.8
Hund08629 Selenicereus undatus HOM05D005313 ORTHO05D006317 3.2e-140 502.3 311 80.7
EL10Ac7g15995 Beta vulgaris HOM05D005313 ORTHO05D006317 5.4e-140 501.5 311 81.4
Dinv17424 Davidia involucrata HOM05D005313 ORTHO05D006317 1.1e-137 493.8 303 82.8
Os09g0553600 Oryza sativa ssp. japonica HOM05D005313 ORTHO05D006317 6.2e-136 488.0 358 70.7
Haze_11011 Corylus avellana HOM05D005313 ORTHO05D006317 3.1e-135 485.7 303 81.5
Duzib248G1582 Durio zibethinus HOM05D005313 ORTHO05D006317 6.9e-135 484.6 338 75.4
AUR62032955 Chenopodium quinoa HOM05D005313 ORTHO05D006317 2.0e-134 483.0 353 72.0
Zm00001eb104420 Zea mays HOM05D005313 ORTHO05D006317 2.9e-133 479.2 358 69.8
HPP92_025383 Vanilla planifolia HOM05D005313 ORTHO05D006317 9.3e-132 474.2 362 69.3
Ah.01g012630 Amaranthus hybridus HOM05D005313 ORTHO05D006317 3.5e-131 472.2 307 78.2
SGA_v2.0_scaffold50G18517 Striga asiatica HOM05D005313 ORTHO05D006317 3.9e-130 468.8 338 74.6
Ciclev10018157m.g Citrus clementina HOM05D005313 ORTHO05D006317 1.5e-129 466.8 290 81.7
BcaC03g17031 Brassica carinata HOM05D005313 ORTHO05D006317 1.9e-129 466.5 342 73.4
SalBow4G0808 Salvia bowleyana HOM05D005313 ORTHO05D006317 5.6e-129 464.9 305 79.7
CAN.G1334.2 Capsicum annuum HOM05D005313 ORTHO05D006317 7.4e-129 464.5 287 82.6
FAN12G1743 Fragaria x ananassa HOM05D005313 ORTHO05D006317 6.2e-128 461.5 431 62.2
Cpa.g.sc65.129 Carica papaya HOM05D005313 ORTHO05D006317 8.1e-128 461.1 325 74.2
Pp3c8_18030 Physcomitrium patens HOM05D005313 ORTHO05D006317 7.6e-126 454.5 361 67.0
CiPaw.06G012200 Carya illinoinensis HOM05D005313 ORTHO05D006317 1.1e-124 450.7 298 77.5
Duzib248G1474 Durio zibethinus HOM05D005313 ORTHO05D006317 7.1e-124 448.0 290 79.0
unitig_0.g2330 Utricularia gibba HOM05D005313 ORTHO05D006317 3.9e-122 442.2 351 68.1
Migut.L00987 Erythranthe guttata HOM05D005313 ORTHO05D006317 1.8e-119 433.3 283 79.2
Nn2g15695 Nelumbo nucifera HOM05D005313 ORTHO05D006317 3.8e-117 425.6 342 67.8
SMO164G0169 Selaginella moellendorffii HOM05D005313 ORTHO05D006317 5.5e-116 421.8 314 68.8
arahy.Tifrunner.gnm1.ann1.Y1EHRK Arachis hypogaea HOM05D005313 ORTHO05D006317 2.7e-115 419.5 336 65.8
arahy.Tifrunner.gnm1.ann1.G5QWBZ Arachis hypogaea HOM05D005313 ORTHO05D006317 6.7e-114 414.8 345 64.6
Mapoly0011s0070 Marchantia polymorpha HOM05D005313 ORTHO05D006317 1.2e-110 404.1 323 62.2
CBR_g30917 Chara braunii HOM05D005313 ORTHO05D006317 6.5e-109 398.3 314 66.9
Nitab4.5_0004816g0010 Nicotiana tabacum HOM05D005313 ORTHO05D006317 9.3e-108 394.4 242 83.1
SEGI_23840 Sequoiadendron giganteum HOM05D005313 ORTHO05D006317 1.9e-105 386.7 255 75.3
DCAR_023608 Daucus carota HOM05D005313 ORTHO05D006317 5.7e-97 358.6 221 82.4
Ca_12605_v3 Cicer arietinum L. HOM05D005313 ORTHO05D006317 6.3e-96 355.1 218 79.4
MCO15G382 Micromonas commoda HOM05D005313 ORTHO05D006317 3.1e-87 326.2 321 55.1
AagrBONN_evm.TU.Sc2ySwM_117.3802 Anthoceros agrestis HOM05D005313 ORTHO05D006317 8.8e-82 308.1 230 67.8
Cre02.g141200 Chlamydomonas reinhardtii HOM05D005313 ORTHO05D006317 3.7e-80 302.8 308 54.9
ATR0807G196 Amborella trichopoda HOM05D005313 ORTHO05D006317 5.3e-79 298.9 192 79.2
PRCOL_00006420 Prasinoderma coloniale HOM05D005313 ORTHO05D006317 7.0e-79 298.5 303 53.1
ClCG07G006260 Citrullus lanatus HOM05D005313 ORTHO05D006317 2.0e-78 297.0 187 79.7
Zm00001eb320780 Zea mays HOM05D005313 ORTHO05D006317 8.3e-72 275.0 220 65.0
Potri.010G113500 Populus trichocarpa HOM05D005313 ORTHO05D006317 5.4e-71 272.3 213 63.8
Dinv05167 Davidia involucrata HOM05D005313 ORTHO05D006317 1.1e-68 264.6 167 82.0
Migut.L00982 Erythranthe guttata HOM05D005313 ORTHO05D006317 4.9e-64 249.2 339 47.2
Actinidia26811 Actinidia chinensis HOM05D005313 ORTHO05D006317 4.4e-57 226.1 151 75.5
CsaV3_UNG236450 Cucumis sativus L. HOM05D005313 ORTHO05D006317 3.7e-56 223.0 286 47.2
SHI04675 Sapria himalayana HOM05D005313 ORTHO05D006317 1.8e-50 204.1 148 67.6
SHI04677 Sapria himalayana HOM05D005313 ORTHO05D006317 1.8e-50 204.1 186 61.3
A06p44480 Brassica napus HOM05D005313 ORTHO05D006317 5.4e-47 192.6 242 50.4
AagrBONN_evm.TU.Sc2ySwM_368.1836 Anthoceros agrestis HOM05D005313 ORTHO05D006317 9.9e-41 171.8 170 55.9
RcHm_v2.0_Chr2g0157601 Rosa chinensis HOM05D005313 ORTHO05D006317 3.2e-39 166.8 118 67.8
Actinidia14964 Actinidia chinensis HOM05D005313 ORTHO05D006317 7.1e-39 165.6 265 41.9
Sabra10G0083500 Salix brachista HOM05D005313 ORTHO05D006317 5.1e-37 159.5 266 40.2
ClCG07G006250 Citrullus lanatus HOM05D005313 ORTHO05D006317 1.9e-36 157.5 111 67.6
Ca_31307_v3 Cicer arietinum L. HOM05D005313 ORTHO05D006317 3.6e-35 153.3 280 34.6
Oeu045874.1 Olea europaea HOM05D005313 ORTHO05D006317 3.5e-30 136.7 243 40.7
COL.COLO4_10085 Corchorus olitorius HOM05D005313 ORTHO05D006317 6.6e-29 132.5 85 72.9
TPR.G36891 Trifolium pratense HOM05D005313 ORTHO05D006317 6.2e-27 125.9 101 67.3
Glyma.07G165500 Glycine max HOM05D005313 ORTHO05D006317 1.4e-23 114.8 81 71.6
TPR.G36912 Trifolium pratense HOM05D005313 ORTHO05D006317 2.1e-22 110.9 99 58.6
CSS0042289 Camellia sinensis var. sinensis HOM05D005313 ORTHO05D006317 1.5e-20 104.8 121 54.5
CAN.G1020.2 Capsicum annuum HOM05D005313 ORTHO05D006317 1.4e-18 98.2 113 50.4
COL.COLO4_10084 Corchorus olitorius HOM05D005313 ORTHO05D006317 1.8e-18 97.8 53 83.0
MBI06_g07791_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 7.6e-17 92.4 59 81.4
Aa31LG11G8270 Aethionema arabicum HOM05D005313 ORTHO05D006317 9.9e-17 92.0 88 59.1
Aa31LG11G8280 Aethionema arabicum HOM05D005313 ORTHO05D006317 1.7e-16 91.3 62 66.1
CsaV3_UNG236470 Cucumis sativus L. HOM05D005313 ORTHO05D006317 6.4e-16 89.4 70 67.1
BcaC06g31315 Brassica carinata HOM05D005313 ORTHO05D006317 3.3e-12 77.0 55 63.6
Actinidia01955 Actinidia chinensis HOM05D005313 ORTHO05D006317 2.8e-11 73.9 43 76.7
AagrBONN_evm.TU.Sc2ySwM_117.3801 Anthoceros agrestis HOM05D005313 ORTHO05D006317 2.9e-08 63.9 57 57.9


User provided reference genes

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