Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.G02097 Eucalyptus grandis HOM05D007597 ORTHO05D009608 6.2e-94 347.4 175 100.0
QL93p0203_0030 Quercus lobata HOM05D007597 ORTHO05D009608 1.5e-42 176.8 175 56.6
MD13G1019900 Malus domestica HOM05D007597 ORTHO05D009608 3.6e-41 172.2 181 54.7
Haze_10869 Corylus avellana HOM05D007597 ORTHO05D009608 5.2e-40 168.3 169 56.8
Duzib251G0764 Durio zibethinus HOM05D007597 ORTHO05D009608 2.2e-38 162.9 168 54.8
Cfa015029 Carpinus fangiana HOM05D007597 ORTHO05D009608 2.9e-38 162.5 170 54.1
Potri.008G135400 Populus trichocarpa HOM05D007597 ORTHO05D009608 1.1e-37 160.6 127 68.5
PGR142G2235 Punica granatum HOM05D007597 ORTHO05D009608 9.2e-37 157.5 169 55.0
Sabra08G0103400 Salix brachista HOM05D007597 ORTHO05D009608 7.8e-36 154.5 177 54.8
Cpa.g.sc2.188 Carica papaya HOM05D007597 ORTHO05D009608 2.9e-35 152.5 180 54.4
CiPaw.06G052900 Carya illinoinensis HOM05D007597 ORTHO05D009608 2.9e-35 152.5 175 56.6
Gorai.012G182800 Gossypium raimondii HOM05D007597 ORTHO05D009608 2.9e-35 152.5 125 64.8
Cc11_g07700 Coffea canephora HOM05D007597 ORTHO05D009608 8.6e-35 151.0 177 52.0
Rhsim04G0170700 Rhododendron simsii HOM05D007597 ORTHO05D009608 8.6e-35 151.0 126 61.9
GSVIVG01011651001 Vitis vinifera HOM05D007597 ORTHO05D009608 8.6e-35 151.0 180 51.7
AUR62037405 Chenopodium quinoa HOM05D007597 ORTHO05D009608 1.1e-34 150.6 132 62.1
Gohir.A04G143100 Gossypium hirsutum HOM05D007597 ORTHO05D009608 1.5e-34 150.2 125 64.8
ClCG07G005520 Citrullus lanatus HOM05D007597 ORTHO05D009608 1.9e-34 149.8 156 54.5
Medtr1g032560 Medicago truncatula HOM05D007597 ORTHO05D009608 1.9e-34 149.8 161 50.9
Gohir.D04G186400 Gossypium hirsutum HOM05D007597 ORTHO05D009608 2.5e-34 149.4 125 62.4
TPR.G36945 Trifolium pratense HOM05D007597 ORTHO05D009608 3.3e-34 149.1 160 51.2
Actinidia38436 Actinidia chinensis HOM05D007597 ORTHO05D009608 4.3e-34 148.7 168 53.6
VMungo1215G2214 Vigna mungo HOM05D007597 ORTHO05D009608 4.3e-34 148.7 159 52.2
Lj2g0017292 Lotus japonicus HOM05D007597 ORTHO05D009608 7.3e-34 147.9 177 46.9
Lalb_Chr10g0095671 Lupinus albus HOM05D007597 ORTHO05D009608 7.3e-34 147.9 174 50.0
Thecc.02G293900 Theobroma cacao HOM05D007597 ORTHO05D009608 7.3e-34 147.9 175 51.4
Psat6g046800 Pisum sativum HOM05D007597 ORTHO05D009608 9.5e-34 147.5 165 50.9
RcHm_v2.0_Chr4g0442791 Rosa chinensis HOM05D007597 ORTHO05D009608 9.5e-34 147.5 177 52.5
CSS0036739 Camellia sinensis var. sinensis HOM05D007597 ORTHO05D009608 1.2e-33 147.1 126 65.1
vmacro08570 Vaccinium macrocarpon HOM05D007597 ORTHO05D009608 2.1e-33 146.4 129 61.2
AUR62034992 Chenopodium quinoa HOM05D007597 ORTHO05D009608 2.8e-33 146.0 119 63.9
Dinv07717 Davidia involucrata HOM05D007597 ORTHO05D009608 2.8e-33 146.0 118 66.9
FAN17G0527 Fragaria x ananassa HOM05D007597 ORTHO05D009608 1.8e-32 143.3 179 51.4
Phvul.003G017900 Phaseolus vulgaris HOM05D007597 ORTHO05D009608 2.3e-32 142.9 166 47.6
Ciclev10016899m.g Citrus clementina HOM05D007597 ORTHO05D009608 3.1e-32 142.5 177 49.7
Prupe.1G334100 Prunus persica HOM05D007597 ORTHO05D009608 3.1e-32 142.5 173 48.6
EL10Ac1g02363 Beta vulgaris HOM05D007597 ORTHO05D009608 4.0e-32 142.1 126 61.9
FAN12G3867 Fragaria x ananassa HOM05D007597 ORTHO05D009608 6.8e-32 141.4 178 52.2
FAN22G0955 Fragaria x ananassa HOM05D007597 ORTHO05D009608 6.8e-32 141.4 178 51.7
Nn3g20775 Nelumbo nucifera HOM05D007597 ORTHO05D009608 8.9e-32 141.0 172 51.2
FvH4_4g33480 Fragaria vesca HOM05D007597 ORTHO05D009608 1.2e-31 140.6 178 51.1
Atru.chr11.909 Acer truncatum HOM05D007597 ORTHO05D009608 1.5e-31 140.2 141 56.7
Aqoxy1G03694 Aquilegia oxysepala HOM05D007597 ORTHO05D009608 1.5e-31 140.2 121 59.5
arahy.Tifrunner.gnm1.ann1.80S20J Arachis hypogaea HOM05D007597 ORTHO05D009608 2.6e-31 139.4 124 58.9
TWI53G0585 Tripterygium wilfordii HOM05D007597 ORTHO05D009608 5.8e-31 138.3 119 63.9
arahy.Tifrunner.gnm1.ann1.FU0M5P Arachis hypogaea HOM05D007597 ORTHO05D009608 1.3e-30 137.1 124 58.1
MSTRG.13629 Avicennia marina HOM05D007597 ORTHO05D009608 3.7e-30 135.6 186 43.5
Glyma.02G085800 Glycine max HOM05D007597 ORTHO05D009608 6.4e-30 134.8 142 51.4
Thhalv10004999m.g Eutrema salsugineum HOM05D007597 ORTHO05D009608 1.1e-29 134.0 121 60.3
Peaxi162Scf00937g00322 Petunia axillaris HOM05D007597 ORTHO05D009608 1.9e-29 133.3 166 50.0
DCAR_030495 Daucus carota HOM05D007597 ORTHO05D009608 2.4e-29 132.9 175 44.6
PGSC0003DMG400026859 Solanum tuberosum HOM05D007597 ORTHO05D009608 2.4e-29 132.9 93 69.9
CSS0009732 Camellia sinensis var. sinensis HOM05D007597 ORTHO05D009608 9.2e-29 131.0 91 70.3
MELO3C016661.2 Cucumis melo HOM05D007597 ORTHO05D009608 9.2e-29 131.0 128 57.8
CANSAT01G1232 Cannabis sativa HOM05D007597 ORTHO05D009608 2.0e-28 129.8 176 43.2
ECA246G4875 Erigeron canadensis HOM05D007597 ORTHO05D009608 2.0e-28 129.8 127 57.5
THA.LOC104824124 Tarenaya hassleriana HOM05D007597 ORTHO05D009608 2.7e-28 129.4 123 57.7
Lsat_1_v5_gn_1_105200 Lactuca sativa HOM05D007597 ORTHO05D009608 3.5e-28 129.0 120 60.8
Solyc03g006540.3 Solanum lycopersicum HOM05D007597 ORTHO05D009608 1.7e-27 126.7 93 67.7
A06p44080 Brassica napus HOM05D007597 ORTHO05D009608 2.3e-27 126.3 158 50.0
BraA06t27282Z Brassica rapa HOM05D007597 ORTHO05D009608 2.3e-27 126.3 158 50.0
PSO017G5208 Papaver somniferum HOM05D007597 ORTHO05D009608 2.3e-27 126.3 127 57.5
C07p32430 Brassica napus HOM05D007597 ORTHO05D009608 3.0e-27 125.9 159 50.3
PSO478G0215 Papaver somniferum HOM05D007597 ORTHO05D009608 3.0e-27 125.9 127 55.9
SalBow2G2924 Salvia bowleyana HOM05D007597 ORTHO05D009608 3.0e-27 125.9 176 43.8
BcaC06g34122 Brassica carinata HOM05D007597 ORTHO05D009608 3.9e-27 125.6 159 50.3
BolC7t43776H Brassica oleracea HOM05D007597 ORTHO05D009608 3.9e-27 125.6 159 50.3
HanXRQChr17g0550621 Helianthus annuus HOM05D007597 ORTHO05D009608 5.0e-27 125.2 126 52.4
Sp2g13210 Schrenkiella parvula HOM05D007597 ORTHO05D009608 5.0e-27 125.2 123 56.9
Lj6P736T27 Lonicera japonica HOM05D007597 ORTHO05D009608 1.1e-26 124.0 83 71.1
BcaC06g31279 Brassica carinata HOM05D007597 ORTHO05D009608 2.5e-26 122.9 123 56.9
Zm00001eb216220 Zea mays HOM05D007597 ORTHO05D009608 2.5e-26 122.9 180 44.4
CARHR144330 Cardamine hirsuta HOM05D007597 ORTHO05D009608 4.3e-26 122.1 129 51.9
Oeu031613.1 Olea europaea HOM05D007597 ORTHO05D009608 1.2e-25 120.6 87 65.5
Aa31LG2G8130 Aethionema arabicum HOM05D007597 ORTHO05D009608 6.2e-25 118.2 123 54.5
ATR0118G012 Amborella trichopoda HOM05D007597 ORTHO05D009608 1.1e-24 117.5 99 61.6
AT2G01755 Arabidopsis thaliana HOM05D007597 ORTHO05D009608 2.3e-24 116.3 120 52.5
AL5G10880 Arabidopsis lyrata HOM05D007597 ORTHO05D009608 4.0e-24 115.5 122 51.6
Sopen03g002540 Solanum pennellii HOM05D007597 ORTHO05D009608 1.5e-23 113.6 81 69.1
Migut.E00488 Erythranthe guttata HOM05D007597 ORTHO05D009608 2.9e-22 109.4 93 61.3
Carub.0005s0071 Capsella rubella HOM05D007597 ORTHO05D009608 1.4e-21 107.1 87 59.8
CBR_g61471 Chara braunii HOM05D007597 ORTHO05D009608 7.1e-21 104.8 104 50.0
Os03g0713200 Oryza sativa ssp. japonica HOM05D007597 ORTHO05D009608 1.6e-20 103.6 154 44.8
AagrBONN_evm.TU.Sc2ySwM_228.3100 Anthoceros agrestis HOM05D007597 ORTHO05D009608 2.1e-20 103.2 90 55.6
COL.COLO4_16605 Corchorus olitorius HOM05D007597 ORTHO05D009608 3.5e-20 102.4 59 78.0
Pp3c16_25200 Physcomitrium patens HOM05D007597 ORTHO05D009608 2.8e-17 92.8 171 36.3
Sed0011475 Sechium edule HOM05D007597 ORTHO05D009608 6.2e-17 91.7 118 52.5
QL03p036112 Quercus lobata HOM05D007597 ORTHO05D009608 2.2e-14 83.2 121 47.1
SMO115G0274 Selaginella moellendorffii HOM05D007597 ORTHO05D009608 5.4e-13 78.6 89 47.2
Nitab4.5_0000241g0020 Nicotiana tabacum HOM05D007597 ORTHO05D009608 2.0e-07 60.1 46 69.6
FAN07G1480 Fragaria x ananassa HOM05D007597 ORTHO05D009608 2.6e-07 59.7 75 56.0
FAN07G2660 Fragaria x ananassa HOM05D007597 ORTHO05D009608 2.6e-07 59.7 75 56.0
Nitab4.5_0006778g0040 Nicotiana tabacum HOM05D007597 ORTHO05D009608 5.8e-07 58.5 88 47.7
TAR371G0144 Trochodendron aralioides HOM05D007597 ORTHO05D009608 1.7e-06 57.0 86 48.8


User provided reference genes

Program Settings