Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.G02019 Eucalyptus grandis HOM05D001956 ORTHO05D002035 1.8e-53 212.2 103 100.0
Eucgr.J01956 Eucalyptus grandis HOM05D001956 ORTHO05D002035 1.4e-45 186.0 102 87.3
Glyma.13G339600 Glycine max HOM05D001956 ORTHO05D002035 1.2e-12 76.6 63 58.7
Sc12g0001110 Simmondsia chinensis HOM05D001956 ORTHO05D002035 5.1e-11 71.2 82 46.3
Glyma.15G034800 Glycine max HOM05D001956 ORTHO05D002035 2.5e-10 68.9 72 48.6
RcHm_v2.0_Chr5g0067231 Rosa chinensis HOM05D001956 ORTHO05D002035 5.6e-10 67.8 77 49.4
PGR119G1807 Punica granatum HOM05D001956 ORTHO05D002035 2.1e-09 65.9 75 50.7
Phvul.L008743 Phaseolus vulgaris HOM05D001956 ORTHO05D002035 3.6e-09 65.1 67 49.3
VMungo1080G1899 Vigna mungo HOM05D001956 ORTHO05D002035 4.8e-09 64.7 68 48.5
FAN11G2245 Fragaria x ananassa HOM05D001956 ORTHO05D002035 6.2e-09 64.3 77 48.1
CiPaw.13G084600 Carya illinoinensis HOM05D001956 ORTHO05D002035 1.1e-08 63.5 74 48.6
FvH4_3g37380 Fragaria vesca HOM05D001956 ORTHO05D002035 1.1e-08 63.5 77 46.8
Cpa.g.sc112.98 Carica papaya HOM05D001956 ORTHO05D002035 5.3e-08 61.2 67 47.8
CiPaw.14G063200 Carya illinoinensis HOM05D001956 ORTHO05D002035 5.3e-08 61.2 70 47.1
FAN16G2274 Fragaria x ananassa HOM05D001956 ORTHO05D002035 5.3e-08 61.2 77 46.8
Prupe.6G065800 Prunus persica HOM05D001956 ORTHO05D002035 5.3e-08 61.2 68 45.6
Atru.chr3.4048 Acer truncatum HOM05D001956 ORTHO05D002035 6.9e-08 60.8 68 47.1
FAN21G0046 Fragaria x ananassa HOM05D001956 ORTHO05D002035 6.9e-08 60.8 77 46.8
Dinv17071 Davidia involucrata HOM05D001956 ORTHO05D002035 1.2e-07 60.1 86 36.0
Dinv43015 Davidia involucrata HOM05D001956 ORTHO05D002035 1.2e-07 60.1 86 36.0
Dinv43082 Davidia involucrata HOM05D001956 ORTHO05D002035 1.2e-07 60.1 86 36.0
Potri.009G039300 Populus trichocarpa HOM05D001956 ORTHO05D002035 3.4e-07 58.5 56 53.6
Lalb_Chr14g0372081 Lupinus albus HOM05D001956 ORTHO05D002035 4.5e-07 58.2 68 45.6
Sabra16G0149400 Salix brachista HOM05D001956 ORTHO05D002035 4.5e-07 58.2 74 41.9
Cfa011622 Carpinus fangiana HOM05D001956 ORTHO05D002035 7.6e-07 57.4 55 50.9
GSVIVG01024835001 Vitis vinifera HOM05D001956 ORTHO05D002035 1.3e-06 56.6 56 51.8
QL01p028873 Quercus lobata HOM05D001956 ORTHO05D002035 1.7e-06 56.2 99 38.4
arahy.Tifrunner.gnm1.ann1.H44KCV Arachis hypogaea HOM05D001956 ORTHO05D002035 2.2e-06 55.8 54 51.9
MD03G1081200 Malus domestica HOM05D001956 ORTHO05D002035 2.9e-06 55.5 57 47.4
MD03G1081600 Malus domestica HOM05D001956 ORTHO05D002035 2.9e-06 55.5 55 47.3
TAR369G1060 Trochodendron aralioides HOM05D001956 ORTHO05D002035 3.8e-06 55.1 77 39.0
Hund03163 Selenicereus undatus HOM05D001956 ORTHO05D002035 4.9e-06 54.7 82 37.8
Ca_01299_v3 Cicer arietinum L. HOM05D001956 ORTHO05D002035 8.4e-06 53.9 62 50.0
TPR.G6887 Trifolium pratense HOM05D001956 ORTHO05D002035 8.4e-06 53.9 58 48.3


User provided reference genes

Program Settings