Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.G01892 Eucalyptus grandis HOM05D005911 ORTHO05D007565 7.7e-118 427.2 216 100.0
Eucgr.G00462 Eucalyptus grandis HOM05D005911 ORTHO05D007565 1.7e-72 276.6 175 82.3
Eucgr.G01900 Eucalyptus grandis HOM05D005911 ORTHO05D007565 1.8e-71 273.1 195 76.9
MD10G1080400 Malus domestica HOM05D005911 ORTHO05D007565 4.3e-44 182.2 178 56.2
Dinv42087 Davidia involucrata HOM05D005911 ORTHO05D007565 3.1e-42 176.0 175 54.9
Hma1.2p1_0066F.1_g036670 Hydrangea macrophylla HOM05D005911 ORTHO05D007565 3.4e-41 172.6 173 52.6
GSVIVG01024153001 Vitis vinifera HOM05D005911 ORTHO05D007565 4.4e-41 172.2 179 52.0
Psat3g133040 Pisum sativum HOM05D005911 ORTHO05D007565 7.6e-41 171.4 179 51.4
PGR042G3082 Punica granatum HOM05D005911 ORTHO05D009502 4.9e-40 168.7 175 53.7
TWI31G0066 Tripterygium wilfordii HOM05D005911 ORTHO05D007565 1.4e-39 167.2 174 54.0
Prupe.8G101700 Prunus persica HOM05D005911 ORTHO05D007565 2.4e-39 166.4 178 52.8
TAR628G1003 Trochodendron aralioides HOM05D005911 ORTHO05D007565 2.4e-39 166.4 178 53.4
Atru.chr5.2957 Acer truncatum HOM05D005911 ORTHO05D007565 4.2e-39 165.6 178 54.5
Thecc.02G123100 Theobroma cacao HOM05D005911 ORTHO05D007565 4.2e-39 165.6 173 53.2
Potri.004G151600 Populus trichocarpa HOM05D005911 ORTHO05D007565 7.1e-39 164.9 178 52.8
Nn1g05068 Nelumbo nucifera HOM05D005911 ORTHO05D007565 9.3e-39 164.5 178 49.4
Duzib248G0238 Durio zibethinus HOM05D005911 ORTHO05D007565 1.2e-38 164.1 173 53.8
Potri.004G152100 Populus trichocarpa HOM05D005911 ORTHO05D007565 2.7e-38 162.9 178 52.2
Cpa.g.sc62.118 Carica papaya HOM05D005911 ORTHO05D007565 6.0e-38 161.8 176 51.1
Sed0023974 Sechium edule HOM05D005911 ORTHO05D007565 6.0e-38 161.8 178 47.2
Nitab4.5_0001794g0010 Nicotiana tabacum HOM05D005911 ORTHO05D007565 7.8e-38 161.4 175 49.1
FAN15G1485 Fragaria x ananassa HOM05D005911 ORTHO05D007565 1.0e-37 161.0 192 47.4
CSS0013374 Camellia sinensis var. sinensis HOM05D005911 ORTHO05D007565 1.3e-37 160.6 172 49.4
Gohir.D04G144200 Gossypium hirsutum HOM05D005911 ORTHO05D007565 1.3e-37 160.6 173 52.6
FAN20G0571 Fragaria x ananassa HOM05D005911 ORTHO05D007565 1.7e-37 160.2 192 46.9
Nitab4.5_0008989g0030 Nicotiana tabacum HOM05D005911 ORTHO05D007565 1.7e-37 160.2 171 49.1
RcHm_v2.0_Chr6g0263461 Rosa chinensis HOM05D005911 ORTHO05D007565 1.7e-37 160.2 178 48.9
CAN.G322.116 Capsicum annuum HOM05D005911 ORTHO05D007565 2.3e-37 159.8 173 49.7
Lj9A367G52 Lonicera japonica HOM05D005911 ORTHO05D007565 3.0e-37 159.5 189 47.6
QL11p042848 Quercus lobata HOM05D005911 ORTHO05D007565 3.0e-37 159.5 178 51.7
Actinidia17824 Actinidia chinensis HOM05D005911 ORTHO05D007565 3.9e-37 159.1 173 52.6
Gorai.012G129800 Gossypium raimondii HOM05D005911 ORTHO05D007565 3.9e-37 159.1 173 52.0
CiPaw.06G137300 Carya illinoinensis HOM05D005911 ORTHO05D007565 6.6e-37 158.3 178 51.1
FvH4_2g08380 Fragaria vesca HOM05D005911 ORTHO05D007565 6.6e-37 158.3 175 49.1
FAN24G3462 Fragaria x ananassa HOM05D005911 ORTHO05D007565 6.6e-37 158.3 175 49.1
MBI16_g17455_MAGBIO Magnolia biondii HOM05D005911 ORTHO05D007565 8.7e-37 157.9 176 49.4
TPR.G20990 Trifolium pratense HOM05D005911 ORTHO05D007565 1.5e-36 157.1 179 47.5
CsaV3_7G023300 Cucumis sativus L. HOM05D005911 ORTHO05D007565 2.5e-36 156.4 203 45.8
Thhalv10011559m.g Eutrema salsugineum HOM05D005911 ORTHO05D007565 2.5e-36 156.4 177 50.8
THA.LOC104804910 Tarenaya hassleriana HOM05D005911 ORTHO05D007565 3.3e-36 156.0 184 51.1
Peaxi162Scf00016g00941 Petunia axillaris HOM05D005911 ORTHO05D007565 4.3e-36 155.6 176 47.7
Sopen01g051640 Solanum pennellii HOM05D005911 ORTHO05D007565 4.3e-36 155.6 179 46.4
MELO3C012560.2 Cucumis melo HOM05D005911 ORTHO05D007565 5.6e-36 155.2 212 43.4
Solyc01g109450.3 Solanum lycopersicum HOM05D005911 ORTHO05D007565 7.3e-36 154.8 176 46.6
PGSC0003DMG400025190 Solanum tuberosum HOM05D005911 ORTHO05D007565 7.3e-36 154.8 176 46.6
ClCG02G005220 Citrullus lanatus HOM05D005911 ORTHO05D007565 9.6e-36 154.5 176 47.7
Cc02_g17800 Coffea canephora HOM05D005911 ORTHO05D007565 9.6e-36 154.5 180 47.8
arahy.Tifrunner.gnm1.ann1.CA4G6V Arachis hypogaea HOM05D005911 ORTHO05D007565 1.6e-35 153.7 176 49.4
Haze_02358 Corylus avellana HOM05D005911 ORTHO05D009502 1.6e-35 153.7 176 51.7
Lalb_Chr16g0385211 Lupinus albus HOM05D005911 ORTHO05D007565 1.6e-35 153.7 189 47.6
Aqoxy5G01675 Aquilegia oxysepala HOM05D005911 ORTHO05D007565 2.1e-35 153.3 176 50.6
Rhsim05G0076000 Rhododendron simsii HOM05D005911 ORTHO05D007565 2.1e-35 153.3 176 50.0
Carub.0001s3853 Capsella rubella HOM05D005911 ORTHO05D007565 2.8e-35 152.9 177 51.4
Migut.N01227 Erythranthe guttata HOM05D005911 ORTHO05D007565 2.8e-35 152.9 176 50.0
Lj4g0018405 Lotus japonicus HOM05D005911 ORTHO05D007565 2.8e-35 152.9 178 47.8
Medtr4g084100 Medicago truncatula HOM05D005911 ORTHO05D007565 2.8e-35 152.9 179 47.5
vmacro19435 Vaccinium macrocarpon HOM05D005911 ORTHO05D007565 2.8e-35 152.9 173 49.1
BcaB02g11057 Brassica carinata HOM05D005911 ORTHO05D007565 3.6e-35 152.5 176 50.6
Ca_18760_v3 Cicer arietinum L. HOM05D005911 ORTHO05D007565 8.1e-35 151.4 175 48.0
Sp1g36210 Schrenkiella parvula HOM05D005911 ORTHO05D007565 8.1e-35 151.4 177 50.8
Sc14g0001790 Simmondsia chinensis HOM05D005911 ORTHO05D007565 8.1e-35 151.4 175 46.9
Phvul.007G233200 Phaseolus vulgaris HOM05D005911 ORTHO05D007565 1.1e-34 151.0 182 46.2
Ciclev10029888m.g Citrus clementina HOM05D005911 ORTHO05D007565 1.4e-34 150.6 174 51.1
Glyma.20G019800 Glycine max HOM05D005911 ORTHO05D007565 1.4e-34 150.6 174 49.4
VMungo0720G1659 Vigna mungo HOM05D005911 ORTHO05D007565 1.4e-34 150.6 183 48.1
A05p20650 Brassica napus HOM05D005911 ORTHO05D007565 2.4e-34 149.8 176 50.0
AT1G49350 Arabidopsis thaliana HOM05D005911 ORTHO05D007565 3.1e-34 149.4 177 49.2
Cfa005027 Carpinus fangiana HOM05D005911 ORTHO05D007565 3.1e-34 149.4 176 50.6
AL1G56310 Arabidopsis lyrata HOM05D005911 ORTHO05D007565 5.3e-34 148.7 173 50.3
Manes.17G099400 Manihot esculenta HOM05D005911 ORTHO05D007565 6.9e-34 148.3 177 49.2
BraA05t20973Z Brassica rapa HOM05D005911 ORTHO05D007565 1.2e-33 147.5 176 48.9
SalBow3G0191 Salvia bowleyana HOM05D005911 ORTHO05D007565 1.2e-33 147.5 176 47.7
COL.COLO4_32449 Corchorus olitorius HOM05D005911 ORTHO05D007565 1.5e-33 147.1 173 50.3
AL1G56510 Arabidopsis lyrata HOM05D003089 ORTHO05D003544 3.4e-33 146.0 191 48.2
BolC5t32220H Brassica oleracea HOM05D005911 ORTHO05D007565 3.4e-33 146.0 176 48.9
BcaC05g27500 Brassica carinata HOM05D005911 ORTHO05D007565 4.5e-33 145.6 176 48.3
BcaC05g27521 Brassica carinata HOM05D005911 ORTHO05D007565 4.5e-33 145.6 176 48.3
C05p34650 Brassica napus HOM05D005911 ORTHO05D007565 4.5e-33 145.6 176 48.3
C05p34970 Brassica napus HOM05D005911 ORTHO05D007565 4.5e-33 145.6 176 48.3
CAN.G149.23 Capsicum annuum HOM05D005911 ORTHO05D007565 5.8e-33 145.2 176 44.3
Hund00288 Selenicereus undatus HOM05D005911 ORTHO05D007565 2.2e-32 143.3 195 43.6
Os05g0185700 Oryza sativa ssp. japonica HOM05D005911 ORTHO05D007565 2.9e-32 142.9 202 39.6
ECA236G0345 Erigeron canadensis HOM05D005911 ORTHO05D007565 4.9e-32 142.1 180 46.7
AUR62011353 Chenopodium quinoa HOM05D005911 ORTHO05D007565 8.4e-32 141.4 175 46.3
SGA_v2.0_scaffold44G16630 Striga asiatica HOM05D005911 ORTHO05D007565 8.4e-32 141.4 176 47.2
Aa31LG10G4600 Aethionema arabicum HOM05D005713 ORTHO05D007751 1.1e-31 141.0 175 46.9
MSTRG.20102 Avicennia marina HOM05D005911 ORTHO05D007565 1.9e-31 140.2 175 48.6
Oeu014335.1 Olea europaea HOM05D005911 ORTHO05D007565 4.2e-31 139.0 177 46.3
EL10Ac9g21750 Beta vulgaris HOM05D005911 ORTHO05D007565 5.4e-31 138.7 175 44.0
AUR62016709 Chenopodium quinoa HOM05D005911 ORTHO05D007565 5.4e-31 138.7 175 45.7
HanXRQChr16g0504971 Helianthus annuus HOM05D005911 ORTHO05D007565 7.1e-31 138.3 180 45.6
DCAR_003638 Daucus carota HOM05D005911 ORTHO05D007565 1.6e-30 137.1 177 45.2
ATR0733G150 Amborella trichopoda HOM05D005911 ORTHO05D007565 3.5e-30 136.0 200 43.5
Nitab4.5_0000443g0010 Nicotiana tabacum HOM05D005911 ORTHO05D007565 6.0e-30 135.2 176 44.3
BolC5t32198H Brassica oleracea HOM05D005911 ORTHO05D007565 7.9e-30 134.8 214 40.2
Sc14g0001910 Simmondsia chinensis HOM05D005911 ORTHO05D007565 1.3e-29 134.0 160 45.0
Sabra04G0100900 Salix brachista HOM05D005911 ORTHO05D007565 6.7e-29 131.7 217 40.6
Zm00001eb346550 Zea mays HOM05D005911 ORTHO05D007565 9.6e-28 127.9 176 40.9
SEGI_31956 Sequoiadendron giganteum HOM05D005911 ORTHO05D007565 5.3e-26 122.1 175 41.7
Lsat_1_v5_gn_7_89660 Lactuca sativa HOM05D005911 ORTHO05D007565 4.9e-24 115.5 206 37.4
FAN27G2671 Fragaria x ananassa HOM05D005911 ORTHO05D007565 1.9e-23 113.6 131 48.1
Gohir.A04G104400 Gossypium hirsutum HOM05D005911 ORTHO05D007565 1.9e-23 113.6 173 42.2
CARHR039360 Cardamine hirsuta HOM05D005911 ORTHO05D007565 4.6e-22 109.0 175 42.3
CDE02G3889 Ceratophyllum demersum HOM05D005911 ORTHO05D007565 4.3e-20 102.4 124 46.0
AagrBONN_evm.TU.Sc2ySwM_117.291 Anthoceros agrestis HOM05D005911 ORTHO05D007565 3.7e-19 99.4 176 38.6
Pp3c15_14160 Physcomitrium patens HOM05D005911 ORTHO05D007565 3.7e-19 99.4 184 37.0
unitig_22.g6840 Utricularia gibba HOM05D005911 ORTHO05D007565 2.9e-16 89.7 136 41.2
Mapoly0044s0080 Marchantia polymorpha HOM05D005911 ORTHO05D007565 1.1e-15 87.8 176 33.5
Gorai.008G153200 Gossypium raimondii HOM05D005911 ORTHO05D007565 2.5e-15 86.7 116 45.7
CBR_g27891 Chara braunii HOM05D005911 ORTHO05D007565 4.6e-14 82.4 136 39.0
SGA_v2.0_scaffold55G19804 Striga asiatica HOM05D005911 ORTHO05D007565 1.9e-12 77.0 100 44.0
Eucgr.G00468 Eucalyptus grandis HOM05D005911 ORTHO05D007565 1.6e-11 73.9 50 70.0
AagrBONN_evm.TU.Sc2ySwM_228.5516 Anthoceros agrestis HOM05D005911 ORTHO05D007565 1.8e-10 70.5 97 41.2
MCO11G507 Micromonas commoda HOM05D005911 ORTHO05D007565 1.3e-08 64.3 179 33.5
Ah.01g006180 Amaranthus hybridus HOM05D002934 ORTHO05D003937 8.5e-08 61.6 89 40.4
PRCOL_00000481 Prasinoderma coloniale HOM05D005911 ORTHO05D007565 4.6e-06 55.8 170 28.2


User provided reference genes

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