Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.G01785 Eucalyptus grandis HOM05D006047 ORTHO05D007353 2.5e-78 295.4 158 100.0
PGR042G1307 Punica granatum HOM05D006047 ORTHO05D007353 7.7e-43 177.6 153 68.0
Cpa.g.sc20.97 Carica papaya HOM05D006047 ORTHO05D007353 7.2e-41 171.0 157 63.7
Thecc.02G058000 Theobroma cacao HOM05D006047 ORTHO05D007353 1.2e-40 170.2 157 63.1
Potri.009G136100 Populus trichocarpa HOM05D006047 ORTHO05D007353 2.7e-40 169.1 155 61.9
COL.COLO4_17357 Corchorus olitorius HOM05D006047 ORTHO05D007353 3.6e-40 168.7 157 64.3
Duzib132G0293 Durio zibethinus HOM05D006047 ORTHO05D007353 8.0e-40 167.5 157 63.1
Gohir.A01G002200 Gossypium hirsutum HOM05D006047 ORTHO05D007353 1.8e-39 166.4 154 63.0
Ciclev10029458m.g Citrus clementina HOM05D006047 ORTHO05D007353 2.3e-39 166.0 159 61.6
Manes.11G097000 Manihot esculenta HOM05D006047 ORTHO05D007353 5.2e-39 164.9 151 63.6
Gorai.002G002400 Gossypium raimondii HOM05D006047 ORTHO05D007353 6.8e-39 164.5 154 63.0
Gohir.D01G001800 Gossypium hirsutum HOM05D006047 ORTHO05D007353 8.8e-39 164.1 154 63.0
CiPaw.06G121100 Carya illinoinensis HOM05D006047 ORTHO05D007353 2.6e-38 162.5 150 64.7
Cfa005258 Carpinus fangiana HOM05D006047 ORTHO05D007353 4.4e-38 161.8 152 60.5
Atru.chr5.3378 Acer truncatum HOM05D006047 ORTHO05D007353 5.7e-38 161.4 158 62.0
Gohir.A03G205400 Gossypium hirsutum HOM05D006047 ORTHO05D007353 5.7e-38 161.4 157 59.2
Gohir.D02G226700 Gossypium hirsutum HOM05D006047 ORTHO05D007353 9.8e-38 160.6 159 59.7
Gorai.005G254600 Gossypium raimondii HOM05D006047 ORTHO05D007353 9.8e-38 160.6 159 59.7
MD05G1123100 Malus domestica HOM05D006047 ORTHO05D007353 2.2e-37 159.5 159 62.3
CiPaw.05G083500 Carya illinoinensis HOM05D006047 ORTHO05D007353 4.9e-37 158.3 153 62.1
MD10G1125900 Malus domestica HOM05D006047 ORTHO05D007353 4.9e-37 158.3 163 60.1
Prupe.8G167000 Prunus persica HOM05D006047 ORTHO05D007353 8.3e-37 157.5 159 62.9
Dinv41931 Davidia involucrata HOM05D006047 ORTHO05D007353 1.4e-36 156.8 158 59.5
GSVIVG01024006001 Vitis vinifera HOM05D006047 ORTHO05D007353 3.1e-36 155.6 158 57.0
CANSAT21G1105 Cannabis sativa HOM05D006047 ORTHO05D007353 4.1e-36 155.2 151 60.3
Sabra09G0105700 Salix brachista HOM05D006047 ORTHO05D007353 4.1e-36 155.2 143 61.5
Aqoxy1G03282 Aquilegia oxysepala HOM05D006047 ORTHO05D007353 1.6e-35 153.3 155 56.8
MBI16_g27295_MAGBIO Magnolia biondii HOM05D006047 ORTHO05D007353 2.7e-35 152.5 156 57.7
Sed0015003 Sechium edule HOM05D006047 ORTHO05D007353 4.5e-35 151.8 148 58.8
vmacro17314 Vaccinium macrocarpon HOM05D006047 ORTHO05D007353 4.5e-35 151.8 151 58.9
Rhsim05G0054100 Rhododendron simsii HOM05D006047 ORTHO05D007353 5.9e-35 151.4 152 58.6
Sopen01g053710 Solanum pennellii HOM05D006047 ORTHO05D007353 7.7e-35 151.0 153 56.9
CSS0000109 Camellia sinensis var. sinensis HOM05D006047 ORTHO05D007353 1.0e-34 150.6 149 57.7
Solyc01g111670.4 Solanum lycopersicum HOM05D006047 ORTHO05D007353 1.3e-34 150.2 153 56.9
Peaxi162Scf00362g00511 Petunia axillaris HOM05D006047 ORTHO05D007353 2.3e-34 149.4 153 56.2
Aqoxy3G00951 Aquilegia oxysepala HOM05D006047 ORTHO05D007353 2.9e-34 149.1 152 55.9
EL10Ac9g21359 Beta vulgaris HOM05D006047 ORTHO05D007353 3.8e-34 148.7 155 56.1
HPP92_012949 Vanilla planifolia HOM05D006047 ORTHO05D007353 5.0e-34 148.3 159 58.5
vmacro17313 Vaccinium macrocarpon HOM05D006047 ORTHO05D007353 6.6e-34 147.9 152 56.6
Nn6g31863 Nelumbo nucifera HOM05D006047 ORTHO05D007353 8.6e-34 147.5 151 57.6
Hma1.2p1_0163F.1_g072560 Hydrangea macrophylla HOM05D006047 ORTHO05D007353 1.1e-33 147.1 153 58.2
PGSC0003DMG400006182 Solanum tuberosum HOM05D006047 ORTHO05D007353 1.5e-33 146.7 161 54.7
ClCG02G012010 Citrullus lanatus HOM05D006047 ORTHO05D007353 1.9e-33 146.4 148 58.8
FAN20G3211 Fragaria x ananassa HOM05D006047 ORTHO05D007353 1.9e-33 146.4 148 61.5
FAN27G2596 Fragaria x ananassa HOM05D001601 ORTHO05D002628 1.9e-33 146.4 150 59.3
DCAR_003178 Daucus carota HOM05D006047 ORTHO05D007353 2.5e-33 146.0 152 53.9
Glyma.18G247500 Glycine max HOM05D006047 ORTHO05D007353 2.5e-33 146.0 153 54.9
Haze_02125 Corylus avellana HOM05D006047 ORTHO05D007353 3.3e-33 145.6 152 57.2
FvH4_2g15480 Fragaria vesca HOM05D006047 ORTHO05D007353 4.3e-33 145.2 148 61.5
FAN24G2638 Fragaria x ananassa HOM05D006047 ORTHO05D007353 4.3e-33 145.2 148 61.5
SHI05754 Sapria himalayana HOM05D006047 ORTHO05D007353 7.3e-33 144.4 159 54.7
Lsat_1_v5_gn_4_71821 Lactuca sativa HOM05D006047 ORTHO05D007353 9.5e-33 144.1 151 57.6
Glyma.09G245500 Glycine max HOM05D006047 ORTHO05D007353 2.1e-32 142.9 150 56.0
SGA_v2.0_scaffold207G41930 Striga asiatica HOM05D006047 ORTHO05D007353 2.1e-32 142.9 153 55.6
TAR625G1286 Trochodendron aralioides HOM05D006047 ORTHO05D007353 2.1e-32 142.9 154 52.6
TAR625G1483 Trochodendron aralioides HOM05D006047 ORTHO05D007353 2.1e-32 142.9 154 52.6
Duzib248G0446 Durio zibethinus HOM05D006047 ORTHO05D007353 3.6e-32 142.1 157 54.8
FAN15G3104 Fragaria x ananassa HOM05D006047 ORTHO05D007353 3.6e-32 142.1 147 60.5
AUR62010029 Chenopodium quinoa HOM05D006047 ORTHO05D007353 6.1e-32 141.4 153 53.6
AUR62013019 Chenopodium quinoa HOM05D006047 ORTHO05D007353 6.1e-32 141.4 153 56.2
Aa31LG6G16610 Aethionema arabicum HOM05D006047 ORTHO05D007353 8.0e-32 141.0 154 51.9
MELO3C020826.2 Cucumis melo HOM05D006047 ORTHO05D007353 8.0e-32 141.0 150 58.7
Lalb_Chr01g0021661 Lupinus albus HOM05D006047 ORTHO05D007353 8.0e-32 141.0 151 55.0
Ca_08043_v3 Cicer arietinum L. HOM05D006047 ORTHO05D007353 1.0e-31 140.6 151 53.0
Sc08g0002850 Simmondsia chinensis HOM05D006047 ORTHO05D007353 1.0e-31 140.6 148 56.1
RcHm_v2.0_Chr6g0278481 Rosa chinensis HOM05D006047 ORTHO05D007353 1.8e-31 139.8 151 57.6
Sed0000957 Sechium edule HOM05D006047 ORTHO05D007353 2.3e-31 139.4 148 56.1
Sopen11g024350 Solanum pennellii HOM05D006047 ORTHO05D007353 2.3e-31 139.4 157 54.1
CsaV3_2G016180 Cucumis sativus L. HOM05D006047 ORTHO05D007353 4.0e-31 138.7 150 57.3
HanXRQChr10g0300821 Helianthus annuus HOM05D006047 ORTHO05D007353 4.0e-31 138.7 148 54.7
Psat3g100240 Pisum sativum HOM05D006047 ORTHO05D007353 5.2e-31 138.3 151 53.6
VMungo1383G0342 Vigna mungo HOM05D006047 ORTHO05D007353 6.8e-31 137.9 151 52.3
Medtr7g081070 Medicago truncatula HOM05D006047 ORTHO05D007353 8.9e-31 137.5 151 51.7
PSO063G4836 Papaver somniferum HOM05D006047 ORTHO05D007353 8.9e-31 137.5 152 52.6
Migut.N01327 Erythranthe guttata HOM05D006047 ORTHO05D007353 1.2e-30 137.1 150 53.3
HanXRQChr12g0374651 Helianthus annuus HOM05D006047 ORTHO05D007353 1.2e-30 137.1 153 52.9
TPR.G32107 Trifolium pratense HOM05D006047 ORTHO05D007353 2.0e-30 136.3 153 52.3
PSO782G4934 Papaver somniferum HOM05D006047 ORTHO05D007353 2.6e-30 136.0 152 52.0
Lalb_Chr19g0126421 Lupinus albus HOM05D006047 ORTHO05D007353 3.4e-30 135.6 153 51.0
Phvul.008G049800 Phaseolus vulgaris HOM05D006047 ORTHO05D007353 5.7e-30 134.8 151 52.3
Ah.01g023100 Amaranthus hybridus HOM05D006047 ORTHO05D007353 1.3e-29 133.7 156 50.0
ATR0064G037 Amborella trichopoda HOM05D006047 ORTHO05D007353 1.7e-29 133.3 154 50.6
Solyc03g044590.2 Solanum lycopersicum HOM05D006047 ORTHO05D007353 2.9e-29 132.5 155 51.6
Cc09_g09850 Coffea canephora HOM05D006047 ORTHO05D007353 4.9e-29 131.7 156 53.2
AL4G10070 Arabidopsis lyrata HOM05D006047 ORTHO05D007353 6.4e-29 131.3 150 50.0
Lj1g0011713 Lotus japonicus HOM05D006047 ORTHO05D007353 6.4e-29 131.3 151 51.0
AT2G20940 Arabidopsis thaliana HOM05D006047 ORTHO05D007353 1.1e-28 130.6 150 50.7
unitig_52.g17373 Utricularia gibba HOM05D006047 ORTHO05D007353 1.1e-28 130.6 150 52.0
CDE02G0256 Ceratophyllum demersum HOM05D006047 ORTHO05D007353 1.4e-28 130.2 146 54.8
SGA_v2.0_scaffold80G25840 Striga asiatica HOM05D006047 ORTHO05D007353 3.2e-28 129.0 153 52.3
Sp4g00130 Schrenkiella parvula HOM05D006047 ORTHO05D007353 4.1e-28 128.6 150 50.0
THA.LOC104824759 Tarenaya hassleriana HOM05D006047 ORTHO05D007353 7.0e-28 127.9 153 49.7
Carub.0004s0003 Capsella rubella HOM05D006047 ORTHO05D007353 2.0e-27 126.3 150 50.7
Actinidia32040 Actinidia chinensis HOM05D006047 ORTHO05D007353 2.7e-27 125.9 139 55.4
ECA234G0646 Erigeron canadensis HOM05D006047 ORTHO05D000476 2.7e-27 125.9 142 54.9
CSS0028471 Camellia sinensis var. sinensis HOM05D006047 ORTHO05D007353 3.5e-27 125.6 151 50.3
Actinidia39157 Actinidia chinensis HOM05D006047 ORTHO05D007353 4.6e-27 125.2 138 55.1
CARHR174220 Cardamine hirsuta HOM05D006047 ORTHO05D007353 7.8e-27 124.4 150 50.7
Thhalv10000376m.g Eutrema salsugineum HOM05D006047 ORTHO05D007353 7.8e-27 124.4 150 48.7
Lsat_1_v5_gn_8_123180 Lactuca sativa HOM05D006047 ORTHO05D007353 1.0e-26 124.0 139 54.0
TWI31G0769 Tripterygium wilfordii HOM05D006047 ORTHO05D007353 1.0e-26 124.0 153 49.0
Actinidia21466 Actinidia chinensis HOM05D006047 ORTHO05D007353 1.3e-26 123.6 138 55.1
Zm00001eb331780 Zea mays HOM05D006047 ORTHO05D007353 1.3e-26 123.6 155 49.0
Zm00001eb103880 Zea mays HOM05D006047 ORTHO05D007353 8.6e-26 120.9 150 50.0
A04p15840 Brassica napus HOM05D006047 ORTHO05D007353 1.1e-25 120.6 149 49.0
C04p50240 Brassica napus HOM05D006047 ORTHO05D007353 1.1e-25 120.6 149 49.0
BolC4t26624H Brassica oleracea HOM05D006047 ORTHO05D007353 1.1e-25 120.6 149 49.0
BraA04t17215Z Brassica rapa HOM05D006047 ORTHO05D007353 1.1e-25 120.6 149 49.0
BcaB06g27764 Brassica carinata HOM05D006047 ORTHO05D007353 1.9e-25 119.8 149 48.3
QL11p050986 Quercus lobata HOM05D006047 ORTHO05D007353 5.6e-25 118.2 145 50.3
AagrBONN_evm.TU.Sc2ySwM_362.1962 Anthoceros agrestis HOM05D006047 ORTHO05D007353 2.0e-22 109.8 150 46.7
MD05G1195600 Malus domestica HOM05D006047 ORTHO05D007353 3.4e-22 109.0 150 48.7
CDE04G1108 Ceratophyllum demersum HOM05D006047 ORTHO05D007353 2.4e-20 102.8 127 51.2
Nitab4.5_0000283g0480 Nicotiana tabacum HOM05D006047 ORTHO05D007353 5.4e-20 101.7 142 45.8
SMO367G0473 Selaginella moellendorffii HOM05D006047 ORTHO05D007353 1.2e-19 100.5 157 47.1
Pp3c24_20200 Physcomitrium patens HOM05D006047 ORTHO05D007353 2.3e-18 96.3 150 45.3
SEGI_27161 Sequoiadendron giganteum HOM05D006047 ORTHO05D007353 3.0e-18 95.9 124 49.2
BcaB01g02958 Brassica carinata HOM05D006047 ORTHO05D007353 6.6e-18 94.7 150 40.7
Sopen11g011060 Solanum pennellii HOM05D011435 ORTHO05D012656 9.5e-17 90.9 143 41.3
Mapoly0036s0025 Marchantia polymorpha HOM05D006047 ORTHO05D007353 1.6e-16 90.1 153 37.3
Nitab4.5_0003914g0120 Nicotiana tabacum HOM05D006047 ORTHO05D007353 1.4e-15 87.0 133 45.9
PGR083G0073 Punica granatum HOM05D006047 ORTHO05D007353 1.8e-15 86.7 153 41.2
CAN.G588.87 Capsicum annuum HOM05D006047 ORTHO05D007353 5.8e-14 81.6 80 52.5
Sed0021144 Sechium edule HOM05D006047 ORTHO05D007353 2.9e-13 79.3 65 66.2
Sed0002860 Sechium edule HOM05D006047 ORTHO05D007353 1.9e-12 76.6 73 60.3
BcaC01g04858 Brassica carinata HOM05D006047 ORTHO05D007353 1.1e-09 67.4 150 32.7
SalBow5G2603 Salvia bowleyana HOM05D006047 ORTHO05D007353 1.8e-07 60.1 107 38.3
HPP92_025899 Vanilla planifolia HOM05D006047 ORTHO05D007353 8.9e-07 57.8 70 44.3
Zm00001eb046330 Zea mays HOM05D001486 ORTHO05D036446 2.6e-06 56.2 44 61.4


User provided reference genes

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