Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.G01750 Eucalyptus grandis HOM05D004157 ORTHO05D004860 1.6e-172 609.4 309 100.0
PGR042G3985 Punica granatum HOM05D004157 ORTHO05D004860 1.2e-87 327.4 257 63.8
Cfa005173 Carpinus fangiana HOM05D004157 ORTHO05D004860 2.2e-86 323.2 259 63.3
Potri.004G167200 Populus trichocarpa HOM05D004157 ORTHO05D004860 1.9e-85 320.1 249 63.5
CANSAT25G0852 Cannabis sativa HOM05D004157 ORTHO05D004860 7.2e-85 318.2 243 64.2
Hma1.2p1_1385F.1_g279670 Hydrangea macrophylla HOM05D004157 ORTHO05D004860 1.2e-84 317.4 245 63.3
Sabra09G0098500 Salix brachista HOM05D004157 ORTHO05D004860 1.2e-84 317.4 249 63.1
TAR381G0601 Trochodendron aralioides HOM05D004157 ORTHO05D004860 7.9e-84 314.7 245 63.7
PGR042G1356 Punica granatum HOM05D004157 ORTHO05D004860 1.8e-83 313.5 245 63.7
QL11p047455 Quercus lobata HOM05D004157 ORTHO05D004860 1.8e-83 313.5 243 64.6
THA.LOC104807783 Tarenaya hassleriana HOM05D004157 ORTHO05D004860 1.8e-83 313.5 261 60.2
HanXRQChr11g0346651 Helianthus annuus HOM05D004157 ORTHO05D004860 5.1e-83 312.0 247 62.3
GSVIVG01024109001 Vitis vinifera HOM05D004157 ORTHO05D004860 1.5e-82 310.5 245 62.9
Sc18g0006720 Simmondsia chinensis HOM05D004157 ORTHO05D004860 2.0e-82 310.1 248 62.5
Eucgr.G01748 Eucalyptus grandis HOM05D004157 ORTHO05D004860 3.3e-82 309.3 245 63.7
TWI79G0156 Tripterygium wilfordii HOM05D004157 ORTHO05D004860 3.3e-82 309.3 248 62.5
EL10Ac9g21458 Beta vulgaris HOM05D004157 ORTHO05D004860 4.3e-82 308.9 248 63.3
Nn5g30153 Nelumbo nucifera HOM05D004157 ORTHO05D004860 5.7e-82 308.5 246 64.2
PGR142G1140 Punica granatum HOM05D004157 ORTHO05D004860 9.7e-82 307.8 245 61.2
TWI75G1232 Tripterygium wilfordii HOM05D004157 ORTHO05D004860 9.7e-82 307.8 248 62.1
Aqoxy5G01458 Aquilegia oxysepala HOM05D004157 ORTHO05D004860 1.3e-81 307.4 245 62.9
FAN24G0875 Fragaria x ananassa HOM05D004157 ORTHO05D004860 1.3e-81 307.4 245 59.2
RcHm_v2.0_Chr6g0245651 Rosa chinensis HOM05D004157 ORTHO05D004860 1.3e-81 307.4 245 60.0
Solyc01g111060.4 Solanum lycopersicum HOM05D004157 ORTHO05D004860 2.2e-81 306.6 285 55.8
Actinidia32087 Actinidia chinensis HOM05D004157 ORTHO05D004860 2.8e-81 306.2 245 62.0
FvH4_2g02150 Fragaria vesca HOM05D004157 ORTHO05D004860 3.7e-81 305.8 245 58.8
Gorai.005G251900 Gossypium raimondii HOM05D004157 ORTHO05D004860 3.7e-81 305.8 245 62.4
Sopen01g053120 Solanum pennellii HOM05D004157 ORTHO05D004860 4.8e-81 305.4 269 57.2
Gohir.A03G202800 Gossypium hirsutum HOM05D004157 ORTHO05D004860 6.3e-81 305.1 245 62.0
vmacro22690 Vaccinium macrocarpon HOM05D004157 ORTHO05D004860 6.3e-81 305.1 245 61.6
Lj5A185T60 Lonicera japonica HOM05D004157 ORTHO05D004860 8.2e-81 304.7 243 62.6
PGSC0003DMG400001636 Solanum tuberosum HOM05D004157 ORTHO05D004860 8.2e-81 304.7 269 57.6
HPP92_002547 Vanilla planifolia HOM05D004157 ORTHO05D004860 8.2e-81 304.7 245 60.8
AL7G10670 Arabidopsis lyrata HOM05D004157 ORTHO05D004860 1.4e-80 303.9 244 60.7
MELO3C013382.2 Cucumis melo HOM05D004157 ORTHO05D004860 1.4e-80 303.9 259 59.1
PSO541G6022 Papaver somniferum HOM05D004157 ORTHO05D004860 1.4e-80 303.9 245 62.9
Thhalv10025990m.g Eutrema salsugineum HOM05D004157 ORTHO05D004860 1.8e-80 303.5 249 59.8
PSO675G5417 Papaver somniferum HOM05D004157 ORTHO05D004860 1.8e-80 303.5 266 58.6
Thecc.02G068100 Theobroma cacao HOM05D004157 ORTHO05D004860 1.8e-80 303.5 243 61.7
FAN20G1131 Fragaria x ananassa HOM05D004157 ORTHO05D004860 2.4e-80 303.1 245 58.8
Ah.01g009470 Amaranthus hybridus HOM05D004157 ORTHO05D004860 3.1e-80 302.8 264 59.1
CsaV3_7G000760 Cucumis sativus L. HOM05D004157 ORTHO05D004860 3.1e-80 302.8 259 58.7
MD10G1116600 Malus domestica HOM05D004157 ORTHO05D004860 3.1e-80 302.8 245 60.0
PSO675G3214 Papaver somniferum HOM05D004157 ORTHO05D004860 3.1e-80 302.8 244 60.7
AT4G38800 Arabidopsis thaliana HOM05D004157 ORTHO05D004860 4.1e-80 302.4 252 58.7
PSO541G4423 Papaver somniferum HOM05D004157 ORTHO05D004860 5.3e-80 302.0 244 60.7
Prupe.8G159400 Prunus persica HOM05D004157 ORTHO05D004860 5.3e-80 302.0 245 59.2
Gohir.D02G224100 Gossypium hirsutum HOM05D004157 ORTHO05D004860 6.9e-80 301.6 245 61.2
Atru.chr5.3210 Acer truncatum HOM05D004157 ORTHO05D004860 9.1e-80 301.2 245 62.0
MSTRG.5432 Avicennia marina HOM05D004157 ORTHO05D004860 9.1e-80 301.2 264 57.2
Carub.0007s0065 Capsella rubella HOM05D004157 ORTHO05D004860 9.1e-80 301.2 267 56.6
DCAR_028937 Daucus carota HOM05D004157 ORTHO05D004860 4.5e-79 298.9 256 56.2
Phvul.009G000600 Phaseolus vulgaris HOM05D004157 ORTHO05D004860 7.7e-79 298.1 244 60.7
BcaC01g00256 Brassica carinata HOM05D004157 ORTHO05D004860 1.3e-78 297.4 249 59.4
Lj1g0011325 Lotus japonicus HOM05D004157 ORTHO05D004860 1.3e-78 297.4 245 59.6
Peaxi162Scf00362g01054 Petunia axillaris HOM05D004157 ORTHO05D004860 1.3e-78 297.4 265 58.5
Lalb_Chr11g0061251 Lupinus albus HOM05D004157 ORTHO05D004860 1.7e-78 297.0 245 59.6
ECA234G4736 Erigeron canadensis HOM05D004157 ORTHO05D004860 2.2e-78 296.6 254 60.2
Glyma.06G005600 Glycine max HOM05D004157 ORTHO05D004860 3.8e-78 295.8 249 59.4
Medtr3g117700 Medicago truncatula HOM05D004157 ORTHO05D004860 6.5e-78 295.0 245 59.2
CARHR247930 Cardamine hirsuta HOM05D004157 ORTHO05D004860 8.5e-78 294.7 267 56.2
VMungo1309G1253 Vigna mungo HOM05D004157 ORTHO05D004860 8.5e-78 294.7 244 60.2
Cc02_g16620 Coffea canephora HOM05D004157 ORTHO05D004860 1.1e-77 294.3 244 59.8
Glyma.04G005900 Glycine max HOM05D004157 ORTHO05D004860 1.4e-77 293.9 244 60.2
Migut.I00211 Erythranthe guttata HOM05D004157 ORTHO05D004860 4.2e-77 292.4 264 56.1
unitig_0.g2353 Utricularia gibba HOM05D004157 ORTHO05D004860 5.5e-77 292.0 245 58.4
A08p24000 Brassica napus HOM05D004157 ORTHO05D004860 9.4e-77 291.2 250 59.2
BcaB03g12226 Brassica carinata HOM05D004157 ORTHO05D004860 1.2e-76 290.8 249 57.8
C03p77330 Brassica napus HOM05D004157 ORTHO05D004860 1.2e-76 290.8 274 56.2
THA.LOC104819635 Tarenaya hassleriana HOM05D004157 ORTHO05D004860 1.2e-76 290.8 243 58.8
CiPaw.06G125600 Carya illinoinensis HOM05D000447 ORTHO05D000315 1.6e-76 290.4 232 62.1
Eucgr.G01749 Eucalyptus grandis HOM05D004157 ORTHO05D004860 1.6e-76 290.4 245 60.8
Psat5g003520 Pisum sativum HOM05D004157 ORTHO05D004860 1.6e-76 290.4 245 58.4
Actinidia00586 Actinidia chinensis HOM05D004157 ORTHO05D004860 2.1e-76 290.0 280 56.4
TPR.G38481 Trifolium pratense HOM05D004157 ORTHO05D004860 2.7e-76 289.7 244 58.6
COL.COLO4_17245 Corchorus olitorius HOM05D004157 ORTHO05D004860 3.6e-76 289.3 282 53.9
HanXRQChr10g0294891 Helianthus annuus HOM05D004157 ORTHO05D004860 3.6e-76 289.3 251 58.2
Lsat_1_v5_gn_3_45521 Lactuca sativa HOM05D004157 ORTHO05D004860 3.6e-76 289.3 268 56.3
Os06g0112200 Oryza sativa ssp. japonica HOM05D004157 ORTHO05D004860 4.7e-76 288.9 242 58.7
unitig_21.g20017 Utricularia gibba HOM05D004157 ORTHO05D004860 4.7e-76 288.9 243 58.0
BolC3t19986H Brassica oleracea HOM05D004157 ORTHO05D004860 7.9e-76 288.1 263 56.3
BraA08t34357Z Brassica rapa HOM05D004157 ORTHO05D004860 7.9e-76 288.1 263 56.3
vmacro17385 Vaccinium macrocarpon HOM05D004157 ORTHO05D004860 7.9e-76 288.1 264 57.2
SGA_v2.0_scaffold80G25867 Striga asiatica HOM05D004157 ORTHO05D004860 1.0e-75 287.7 262 58.4
Manes.04G078800 Manihot esculenta HOM05D004157 ORTHO05D004860 1.4e-75 287.3 228 61.4
Aa31LG6G16410 Aethionema arabicum HOM05D004157 ORTHO05D004860 2.3e-75 286.6 283 53.4
A08p16520 Brassica napus HOM05D004157 ORTHO05D004860 3.0e-75 286.2 245 58.4
Sp7g32610 Schrenkiella parvula HOM05D004157 ORTHO05D004860 3.0e-75 286.2 245 57.1
Thhalv10026821m.g Eutrema salsugineum HOM05D004157 ORTHO05D004860 3.9e-75 285.8 245 57.1
Aqoxy2G00577 Aquilegia oxysepala HOM05D004157 ORTHO05D004860 5.1e-75 285.4 245 58.8
Sed0001494 Sechium edule HOM05D000447 ORTHO05D000315 6.7e-75 285.0 229 62.4
VMungo1309G1201 Vigna mungo HOM05D004157 ORTHO05D004860 8.8e-75 284.6 244 59.0
BcaC01g00866 Brassica carinata HOM05D004157 ORTHO05D004860 1.1e-74 284.3 245 58.0
Aa31LG2G15700 Aethionema arabicum HOM05D004157 ORTHO05D004860 1.5e-74 283.9 245 57.6
arahy.Tifrunner.gnm1.ann1.391TM2 Arachis hypogaea HOM05D004157 ORTHO05D004860 2.0e-74 283.5 252 56.3
arahy.Tifrunner.gnm1.ann1.66CLCN Arachis hypogaea HOM05D004157 ORTHO05D004860 2.0e-74 283.5 252 56.3
ClCG02G004360 Citrullus lanatus HOM05D000447 ORTHO05D000315 2.6e-74 283.1 247 57.5
Glyma.06G005700 Glycine max HOM05D004157 ORTHO05D004860 2.6e-74 283.1 244 58.2
Nitab4.5_0000283g0220 Nicotiana tabacum HOM05D004157 ORTHO05D004860 2.6e-74 283.1 259 57.5
Hund00051 Selenicereus undatus HOM05D004157 ORTHO05D004860 4.4e-74 282.3 212 65.6
BcaB03g11807 Brassica carinata HOM05D004157 ORTHO05D004860 7.4e-74 281.6 245 57.1
C03p85360 Brassica napus HOM05D004157 ORTHO05D004860 7.4e-74 281.6 245 57.6
CAN.G588.18 Capsicum annuum HOM05D004157 ORTHO05D004860 7.4e-74 281.6 233 60.1
Carub.0007s0546 Capsella rubella HOM05D004157 ORTHO05D004860 1.3e-73 280.8 245 57.1
Phvul.009G000700 Phaseolus vulgaris HOM05D004157 ORTHO05D004860 1.7e-73 280.4 262 55.0
AL7G16370 Arabidopsis lyrata HOM05D004157 ORTHO05D004860 2.2e-73 280.0 245 55.9
Oeu055643.1 Olea europaea HOM05D004157 ORTHO05D004860 2.2e-73 280.0 233 59.7
ATR0089G001 Amborella trichopoda HOM05D004157 ORTHO05D004860 2.8e-73 279.6 212 64.6
Sed0017382 Sechium edule HOM05D004157 ORTHO05D004860 3.7e-73 279.3 228 61.4
BolC3t20826H Brassica oleracea HOM05D004157 ORTHO05D004860 4.8e-73 278.9 245 57.1
DCAR_003693 Daucus carota HOM05D004157 ORTHO05D004860 1.1e-72 277.7 212 63.2
ATR0095G001 Amborella trichopoda HOM05D004157 ORTHO05D004860 1.4e-72 277.3 212 64.2
CARHR243130 Cardamine hirsuta HOM05D004157 ORTHO05D004860 1.4e-72 277.3 244 57.4
Ca_15317_v3 Cicer arietinum L. HOM05D000600 ORTHO05D004860 1.4e-72 277.3 250 55.6
Duzib052G0280 Durio zibethinus HOM05D004157 ORTHO05D004860 1.8e-72 276.9 245 57.6
vmacro02241 Vaccinium macrocarpon HOM05D004157 ORTHO05D004860 1.8e-72 276.9 252 55.6
AUR62010110 Chenopodium quinoa HOM05D004157 ORTHO05D004860 9.1e-72 274.6 314 50.0
Lj9A389T64 Lonicera japonica HOM05D004157 ORTHO05D004860 9.1e-72 274.6 214 63.1
Lsat_1_v5_gn_1_62181 Lactuca sativa HOM05D004157 ORTHO05D004860 2.6e-71 273.1 240 57.9
Zm00001eb036610 Zea mays HOM05D004157 ORTHO05D004860 6.5e-70 268.5 245 53.9
Zm00001eb175180 Zea mays HOM05D004157 ORTHO05D004860 1.1e-69 267.7 245 53.9
Oeu002957.1 Olea europaea HOM05D004157 ORTHO05D004860 1.9e-69 266.9 219 60.7
Duzib132G0743 Durio zibethinus HOM05D004157 ORTHO05D004860 2.1e-68 263.5 245 56.3
SHI05673 Sapria himalayana HOM05D004157 ORTHO05D004860 8.8e-67 258.1 212 59.9
Sp7g37020 Schrenkiella parvula HOM05D004157 ORTHO05D004860 9.7e-66 254.6 249 54.2
Prupe.8G159500 Prunus persica HOM05D004157 ORTHO05D004860 2.8e-65 253.1 254 53.9
Ciclev10029225m.g Citrus clementina HOM05D004157 ORTHO05D004860 4.8e-65 252.3 245 54.3
AT4G34840 Arabidopsis thaliana HOM05D004157 ORTHO05D004860 7.0e-64 248.4 203 59.1
SGA_v2.0_scaffold32G13240 Striga asiatica HOM05D004157 ORTHO05D004860 1.6e-63 247.3 264 52.7
Rhsim11G0186900 Rhododendron simsii HOM05D004157 ORTHO05D004860 5.9e-63 245.4 205 59.5
Actinidia27843 Actinidia chinensis HOM05D004157 ORTHO05D004860 7.2e-61 238.4 233 52.8
Mapoly0026s0093 Marchantia polymorpha HOM05D004157 ORTHO05D004860 2.1e-60 236.9 245 49.4
Pp3c14_1450 Physcomitrium patens HOM05D004157 ORTHO05D004860 3.6e-60 236.1 246 50.0
Potri.009G128700 Populus trichocarpa HOM05D004157 ORTHO05D004860 4.7e-60 235.7 184 62.5
Cpa.g.sc37.201 Carica papaya HOM05D004157 ORTHO05D004860 8.0e-60 235.0 247 51.8
PGR042G2276 Punica granatum HOM05D004157 ORTHO05D004860 1.0e-59 234.6 243 53.1
Pp3c1_20870 Physcomitrium patens HOM05D004157 ORTHO05D004860 4.0e-59 232.6 246 47.6
CDE02G2528 Ceratophyllum demersum HOM05D004157 ORTHO05D004860 1.5e-58 230.7 244 48.8
vmacro22693 Vaccinium macrocarpon HOM05D004157 ORTHO05D004860 3.4e-58 229.6 304 45.1
AUR62013103 Chenopodium quinoa HOM05D004157 ORTHO05D004860 7.5e-58 228.4 183 64.5
Pp3c26_5320 Physcomitrium patens HOM05D004157 ORTHO05D004860 7.0e-56 221.9 237 48.9
SMO147G0350 Selaginella moellendorffii HOM05D004157 ORTHO05D004860 5.0e-54 215.7 251 47.4
SEGI_37242 Sequoiadendron giganteum HOM05D004157 ORTHO05D004860 1.5e-53 214.2 197 52.8
BraA08t33620Z Brassica rapa HOM05D004157 ORTHO05D004860 3.2e-53 213.0 180 59.4
Rhsim05G0063700 Rhododendron simsii HOM05D004157 ORTHO05D004860 9.4e-53 211.5 195 57.9
AagrBONN_evm.TU.Sc2ySwM_368.2286 Anthoceros agrestis HOM05D004157 ORTHO05D004860 1.2e-50 204.5 246 44.7
Dinv04975 Davidia involucrata HOM05D000600 ORTHO05D000432 1.2e-47 194.5 154 60.4
Cre03.g162550 Chlamydomonas reinhardtii HOM05D004157 ORTHO05D004860 2.1e-44 183.7 233 41.6
MCO15G557 Micromonas commoda HOM05D004157 ORTHO05D004860 2.3e-43 180.3 243 39.1
vmacro02237 Vaccinium macrocarpon HOM05D004157 ORTHO05D004860 5.2e-43 179.1 206 51.5
Nitab4.5_0000980g0360 Nicotiana tabacum HOM05D004157 ORTHO05D004860 2.6e-42 176.8 146 62.3
Rhsim11G0185600 Rhododendron simsii HOM05D004157 ORTHO05D004860 9.8e-42 174.9 186 51.6
Eucgr.L03396 Eucalyptus grandis HOM05D004157 ORTHO05D004860 4.0e-35 152.9 104 69.2
Rhsim11G0186700 Rhododendron simsii HOM05D004157 ORTHO05D004860 1.5e-34 151.0 164 51.8
SalBow3G1540 Salvia bowleyana HOM05D004157 ORTHO05D004860 6.6e-30 135.6 119 58.0
PRCOL_00006969 Prasinoderma coloniale HOM05D004157 ORTHO05D004860 1.8e-27 127.5 242 35.1
MBI09_g11914_MAGBIO Magnolia biondii HOM05D004157 ORTHO05D004860 1.5e-26 124.4 101 60.4
TAR625G0759 Trochodendron aralioides HOM05D004157 ORTHO05D004860 3.7e-25 119.8 95 61.1
Hma1.2p1_0032F.1_g019710 Hydrangea macrophylla HOM05D004157 ORTHO05D004860 2.1e-23 114.0 146 48.6
Haze_02206 Corylus avellana HOM05D000447 ORTHO05D000315 4.0e-19 99.8 99 52.5
SalBow3G3146 Salvia bowleyana HOM05D004157 ORTHO05D004860 5.8e-18 95.9 78 55.1
C07p63580 Brassica napus HOM05D004157 ORTHO05D004860 8.4e-17 92.0 118 44.9
BolC7t46771H Brassica oleracea HOM05D004157 ORTHO05D004860 8.4e-17 92.0 118 44.9
Medtr0173s0020 Medicago truncatula HOM05D004157 ORTHO05D004860 1.4e-16 91.3 82 56.1
Glyma.04G006001 Glycine max HOM05D004157 ORTHO05D004860 3.2e-16 90.1 65 63.1
TAR625G0858 Trochodendron aralioides HOM05D004157 ORTHO05D004860 3.0e-14 83.6 140 39.3
arahy.Tifrunner.gnm1.ann1.R1P6K1 Arachis hypogaea HOM05D004157 ORTHO05D004860 1.5e-13 81.3 117 37.6
CBR_g20180 Chara braunii HOM05D004157 ORTHO05D004860 1.9e-13 80.9 290 24.1
vmacro02118 Vaccinium macrocarpon HOM05D004157 ORTHO05D004860 5.6e-13 79.3 76 51.3
Rhsim01G0041000 Rhododendron simsii HOM05D004157 ORTHO05D004860 4.7e-12 76.3 63 57.1
Aqoxy6G02338 Aquilegia oxysepala HOM05D004157 ORTHO05D004860 2.9e-09 67.0 83 43.4


User provided reference genes

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