Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.G01727 Eucalyptus grandis HOM05D000120 ORTHO05D009410 2.0e-127 459.1 239 100.0
Dinv23458 Davidia involucrata HOM05D000120 ORTHO05D009410 3.4e-42 176.0 241 44.0
Ciclev10029808m.g Citrus clementina HOM05D000120 ORTHO05D009410 3.3e-37 159.5 254 40.6
Thecc.02G075700 Theobroma cacao HOM05D000120 ORTHO05D009410 1.8e-35 153.7 251 39.8
COL.COLO4_26040 Corchorus olitorius HOM05D000120 ORTHO05D009410 2.0e-34 150.2 241 41.1
Cfa005100 Carpinus fangiana HOM05D000722 ORTHO05D000590 4.5e-34 149.1 239 41.4
Manes.11G082300 Manihot esculenta HOM05D000120 ORTHO05D009410 1.7e-33 147.1 250 38.8
Haze_02260 Corylus avellana HOM05D000120 ORTHO05D009410 6.4e-33 145.2 241 41.5
PGR042G1442 Punica granatum HOM05D000120 ORTHO05D009410 3.5e-31 139.4 251 39.8
vmacro02052 Vaccinium macrocarpon HOM05D000120 ORTHO05D009410 1.0e-30 137.9 234 38.0
Duzib248G0587 Durio zibethinus HOM05D000120 ORTHO05D009410 3.0e-30 136.3 250 37.2
Sabra09G0095200 Salix brachista HOM05D000120 ORTHO05D009410 1.5e-29 134.0 249 36.9
Potri.009G124000 Populus trichocarpa HOM05D000120 ORTHO05D009410 7.4e-29 131.7 250 36.8
Potri.004G162300 Populus trichocarpa HOM05D000120 ORTHO05D009410 1.6e-28 130.6 244 36.1
GSVIVG01024178001 Vitis vinifera HOM05D000120 ORTHO05D009410 1.6e-28 130.6 239 37.2
Oeu055633.1 Olea europaea HOM05D000120 ORTHO05D009410 4.8e-28 129.0 241 39.4
Manes.04G083900 Manihot esculenta HOM05D000120 ORTHO05D009410 6.2e-28 128.6 246 38.2
AUR62016822 Chenopodium quinoa HOM05D000120 ORTHO05D009410 1.4e-27 127.5 243 36.2
Duzib132G0615 Durio zibethinus HOM05D000120 ORTHO05D009410 5.3e-27 125.6 253 36.0
Hma1.2p1_1244F.1_g270010 Hydrangea macrophylla HOM05D000120 ORTHO05D009410 9.0e-27 124.8 247 37.7
RcHm_v2.0_Chr6g0267851 Rosa chinensis HOM05D000120 ORTHO05D009410 1.2e-26 124.4 244 36.9
AUR62010396 Chenopodium quinoa HOM05D000120 ORTHO05D009410 5.8e-26 122.1 247 36.8
TWI79G0897 Tripterygium wilfordii HOM05D000120 ORTHO05D009410 1.3e-25 120.9 228 36.0
TAR376G0786 Trochodendron aralioides HOM05D000120 ORTHO05D009410 4.9e-25 119.0 241 34.0
MSTRG.5421 Avicennia marina HOM05D000120 ORTHO05D009410 6.4e-25 118.6 226 36.7
MD10G1063700 Malus domestica HOM05D000120 ORTHO05D009410 8.4e-25 118.2 245 34.3
Lj3g0001494 Lotus japonicus HOM05D000120 ORTHO05D009410 1.9e-24 117.1 247 31.6
MD00G1040100 Malus domestica HOM05D000120 ORTHO05D009410 1.9e-24 117.1 245 35.5
TWI31G0702 Tripterygium wilfordii HOM05D000120 ORTHO05D009410 2.4e-24 116.7 227 35.7
Actinidia02243 Actinidia chinensis HOM05D000120 ORTHO05D009410 3.2e-24 116.3 216 38.9
FAN20G2164 Fragaria x ananassa HOM05D000120 ORTHO05D009410 7.1e-24 115.2 246 37.8
Sc08g0000840 Simmondsia chinensis HOM05D000120 ORTHO05D009410 7.1e-24 115.2 237 35.9
Hund00217 Selenicereus undatus HOM05D000120 ORTHO05D000105 1.6e-23 114.0 261 33.7
Ca_27169_v3 Cicer arietinum L. HOM05D000120 ORTHO05D009410 2.7e-23 113.2 253 34.8
FvH4_2g10380 Fragaria vesca HOM05D000120 ORTHO05D009410 3.5e-23 112.8 246 37.0
Prupe.8G085200 Prunus persica HOM05D000120 ORTHO05D009410 6.0e-23 112.1 236 35.2
FAN24G2037 Fragaria x ananassa HOM05D000120 ORTHO05D009410 1.8e-22 110.5 246 36.6
Phvul.011G156600 Phaseolus vulgaris HOM05D000120 ORTHO05D009410 3.0e-22 109.8 243 33.7
Lalb_Chr03g0030591 Lupinus albus HOM05D000120 ORTHO05D009410 5.1e-22 109.0 242 36.0
Cpa.g.sc150.20 Carica papaya HOM05D000120 ORTHO05D009410 8.7e-22 108.2 246 33.3
Duzib052G0028 Durio zibethinus HOM05D000120 ORTHO05D009410 1.9e-21 107.1 244 33.2
arahy.Tifrunner.gnm1.ann1.X3J0BR Arachis hypogaea HOM05D000120 ORTHO05D009410 2.5e-21 106.7 246 36.6
CANSAT11G1664 Cannabis sativa HOM05D000120 ORTHO05D009410 4.3e-21 105.9 247 32.4
MELO3C002789.2 Cucumis melo HOM05D000120 ORTHO05D009410 4.3e-21 105.9 245 33.5
Gorai.008G031900 Gossypium raimondii HOM05D000120 ORTHO05D009410 7.4e-21 105.1 333 28.5
VMungo1127G0720 Vigna mungo HOM05D000120 ORTHO05D009410 1.3e-20 104.4 258 32.9
CsaV3_7G000360 Cucumis sativus L. HOM05D000120 ORTHO05D009410 2.1e-20 103.6 248 33.5
Gohir.A12G041200 Gossypium hirsutum HOM05D000120 ORTHO05D009410 4.8e-20 102.4 333 28.8
Sopen01g052500 Solanum pennellii HOM05D000120 ORTHO05D009410 6.2e-20 102.1 241 35.3
Solyc01g110350.2 Solanum lycopersicum HOM05D000120 ORTHO05D009410 8.2e-20 101.7 241 35.3
Peaxi162Scf00016g10015 Petunia axillaris HOM05D000120 ORTHO05D009410 3.1e-19 99.8 249 32.9
QL11p046369 Quercus lobata HOM05D000120 ORTHO05D009410 4.0e-19 99.4 374 27.3
ClCG02G004590 Citrullus lanatus HOM05D000120 ORTHO05D009410 5.3e-19 99.0 238 31.1
Glyma.06G246300 Glycine max HOM05D000120 ORTHO05D009410 6.9e-19 98.6 274 30.3
Nitab4.5_0017990g0010 Nicotiana tabacum HOM05D000120 ORTHO05D009410 1.2e-18 97.8 246 33.7
TAR628G1238 Trochodendron aralioides HOM05D000120 ORTHO05D009410 1.2e-18 97.8 248 31.9
Atru.chr5.3139 Acer truncatum HOM05D000120 ORTHO05D009410 1.5e-18 97.4 223 35.9
Aqoxy5G01485 Aquilegia oxysepala HOM05D000120 ORTHO05D009410 1.5e-18 97.4 248 29.4
Sed0018675 Sechium edule HOM05D000120 ORTHO05D009410 1.5e-18 97.4 285 30.2
FAN27G2529 Fragaria x ananassa HOM05D000120 ORTHO05D009410 2.0e-18 97.1 212 35.8
Lsat_1_v5_gn_3_44160 Lactuca sativa HOM05D000120 ORTHO05D009410 2.0e-18 97.1 230 34.8
PGSC0003DMG400046163 Solanum tuberosum HOM05D000120 ORTHO05D009410 7.6e-18 95.1 251 33.9
Gohir.D12G031200 Gossypium hirsutum HOM05D000120 ORTHO05D009410 1.0e-17 94.7 200 34.0
HanXRQChr15g0478301 Helianthus annuus HOM05D000120 ORTHO05D009410 2.2e-17 93.6 212 34.0
PSO210G7327 Papaver somniferum HOM05D000120 ORTHO05D009410 3.8e-17 92.8 252 30.6
Nn7g36692 Nelumbo nucifera HOM05D000120 ORTHO05D009410 4.9e-17 92.4 260 31.5
Sed0016080 Sechium edule HOM05D000120 ORTHO05D009410 4.9e-17 92.4 285 27.4
CAN.G170.96 Capsicum annuum HOM05D000120 ORTHO05D009410 1.1e-16 91.3 250 34.4
CiPaw.06G128400 Carya illinoinensis HOM05D000120 ORTHO05D009410 2.5e-16 90.1 244 33.2
unitig_747.g21207 Utricularia gibba HOM05D000120 ORTHO05D009410 2.7e-15 86.7 226 34.5
Cc02_g16960 Coffea canephora HOM05D000120 ORTHO05D009410 7.9e-15 85.1 238 30.7
ECA240G4650 Erigeron canadensis HOM05D000120 ORTHO05D009410 1.0e-14 84.7 216 32.9
Aa31LG6G16270 Aethionema arabicum HOM05D011065 ORTHO05D009410 1.8e-14 84.0 247 31.2
DCAR_022914 Daucus carota HOM05D000120 ORTHO05D009410 2.5e-13 80.1 239 29.3
AT4G38980 Arabidopsis thaliana HOM05D011065 ORTHO05D009410 9.7e-13 78.2 289 29.4
TPR.G31517 Trifolium pratense HOM05D000120 ORTHO05D009410 2.8e-12 76.6 240 30.0
BcaB03g12236 Brassica carinata HOM05D011065 ORTHO05D009410 6.3e-12 75.5 254 28.0
Thhalv10027283m.g Eutrema salsugineum HOM05D011065 ORTHO05D009410 6.3e-12 75.5 256 30.9
Sp7g36860 Schrenkiella parvula HOM05D011065 ORTHO05D009410 2.4e-11 73.6 267 29.6
Carub.0007s0080 Capsella rubella HOM05D011065 ORTHO05D009410 4.1e-11 72.8 268 27.6
Migut.B00178 Erythranthe guttata HOM05D000120 ORTHO05D009410 6.9e-11 72.0 228 30.7
Psat4g137840 Pisum sativum HOM05D000120 ORTHO05D009410 2.0e-10 70.5 225 29.3
Sabra04G0109000 Salix brachista HOM05D000120 ORTHO05D009410 2.0e-10 70.5 234 28.2
BraA08t34348Z Brassica rapa HOM05D011065 ORTHO05D009410 3.4e-10 69.7 253 26.5
SalBow6G2916 Salvia bowleyana HOM05D000120 ORTHO05D009410 4.5e-10 69.3 277 26.0
BcaC01g00270 Brassica carinata HOM05D011065 ORTHO05D009410 5.9e-10 68.9 253 27.7
A08p23900 Brassica napus HOM05D011065 ORTHO05D009410 5.9e-10 68.9 256 25.8
C03p77470 Brassica napus HOM05D011065 ORTHO05D009410 5.9e-10 68.9 253 27.7
BolC3t20002H Brassica oleracea HOM05D011065 ORTHO05D009410 5.9e-10 68.9 253 27.7
AL7G10880 Arabidopsis lyrata HOM05D011065 ORTHO05D009410 5.0e-09 65.9 266 28.2
Glyma.12G151000 Glycine max HOM05D000120 ORTHO05D009410 6.5e-09 65.5 179 30.7
SGA_v2.0_scaffold32G13221 Striga asiatica HOM05D000120 ORTHO05D009410 3.2e-08 63.2 230 27.4
Os02g0469000 Oryza sativa ssp. japonica HOM05D000120 ORTHO05D009410 9.4e-08 61.6 231 29.9
BcaC01g00269 Brassica carinata HOM05D011065 ORTHO05D009410 1.6e-07 60.8 253 27.3
C03p77450 Brassica napus HOM05D011065 ORTHO05D009410 1.6e-07 60.8 253 27.3
BolC3t20000H Brassica oleracea HOM05D011065 ORTHO05D009410 1.6e-07 60.8 253 27.3
Zm00001eb180650 Zea mays HOM05D000120 ORTHO05D009410 2.7e-07 60.1 245 24.5
PSO170G1560 Papaver somniferum HOM05D000120 ORTHO05D009410 6.1e-07 58.9 66 42.4
THA.LOC104824794 Tarenaya hassleriana HOM05D011065 ORTHO05D009410 6.1e-07 58.9 218 28.0


User provided reference genes

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